Literature DB >> 21876165

Mechanistic basis of bell-shaped dependence of inositol 1,4,5-trisphosphate receptor gating on cytosolic calcium.

Tadashi Shinohara1, Takayuki Michikawa, Masahiro Enomoto, Jun-Ichi Goto, Miwako Iwai, Toru Matsu-ura, Haruka Yamazaki, Akitoshi Miyamoto, Akio Suzuki, Katsuhiko Mikoshiba.   

Abstract

The inositol 1,4,5-trisphosphate (IP(3)) receptor (IP(3)R) is an intracellular Ca(2+) release channel, and its opening is controlled by IP(3) and Ca(2+). A single IP(3) binding site and multiple Ca(2+) binding sites exist on single subunits, but the precise nature of the interplay between these two ligands in regulating biphasic dependence of channel activity on cytosolic Ca(2+) is unknown. In this study, we visualized conformational changes in IP(3)R evoked by various concentrations of ligands by using the FRET between two fluorescent proteins fused to the N terminus of individual subunits. IP(3) and Ca(2+) have opposite effects on the FRET signal change, but the combined effect of these ligands is not a simple summative response. The bell-shaped Ca(2+) dependence of FRET efficiency was observed after the subtraction of the component corresponding to the FRET change evoked by Ca(2+) alone from the FRET changes evoked by both ligands together. A mutant IP(3)R containing a single amino acid substitution at K508, which is critical for IP(3) binding, did not exhibit this bell-shaped Ca(2+) dependence of the subtracted FRET efficiency. Mutation at E2100, which is known as a Ca(2+) sensor, resulted in ∼10-fold reduction in the Ca(2+) dependence of the subtracted signal. These results suggest that the subtracted FRET signal reflects IP(3)R activity. We propose a five-state model, which implements a dual-ligand competition response without complex allosteric regulation of Ca(2+) binding affinity, as the mechanism underlying the IP(3)-dependent regulation of the bell-shaped relationship between the IP(3)R activity and cytosolic Ca(2+).

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Year:  2011        PMID: 21876165      PMCID: PMC3174635          DOI: 10.1073/pnas.1101677108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Tyr-167/Trp-168 in type 1/3 inositol 1,4,5-trisphosphate receptor mediates functional coupling between ligand binding and channel opening.

Authors:  Haruka Yamazaki; Jenny Chan; Mitsuhiko Ikura; Takayuki Michikawa; Katsuhiko Mikoshiba
Journal:  J Biol Chem       Date:  2010-09-02       Impact factor: 5.157

2.  The role of the S4-S5 linker and C-terminal tail in inositol 1,4,5-trisphosphate receptor function.

Authors:  Zachary T Schug; Suresh K Joseph
Journal:  J Biol Chem       Date:  2006-06-30       Impact factor: 5.157

3.  Purification and characterization of P400 protein, a glycoprotein characteristic of Purkinje cell, from mouse cerebellum.

Authors:  N Maeda; M Niinobe; K Nakahira; K Mikoshiba
Journal:  J Neurochem       Date:  1988-12       Impact factor: 5.372

4.  Structural studies of inositol 1,4,5-trisphosphate receptor: coupling ligand binding to channel gating.

Authors:  Jenny Chan; Haruka Yamazaki; Noboru Ishiyama; Min-Duk Seo; Tapas K Mal; Takayuki Michikawa; Katsuhiko Mikoshiba; Mitsuhiko Ikura
Journal:  J Biol Chem       Date:  2010-09-15       Impact factor: 5.157

5.  Cluster formation of inositol 1,4,5-trisphosphate receptor requires its transition to open state.

Authors:  Yoko Tateishi; Mitsuharu Hattori; Tomohiro Nakayama; Miwako Iwai; Hiroko Bannai; Takeshi Nakamura; Takayuki Michikawa; Takafumi Inoue; Katsuhiko Mikoshiba
Journal:  J Biol Chem       Date:  2004-12-06       Impact factor: 5.157

6.  Calmodulin mediates calcium-dependent inactivation of the cerebellar type 1 inositol 1,4,5-trisphosphate receptor.

Authors:  T Michikawa; J Hirota; S Kawano; M Hiraoka; M Yamada; T Furuichi; K Mikoshiba
Journal:  Neuron       Date:  1999-08       Impact factor: 17.173

7.  Three-dimensional rearrangements within inositol 1,4,5-trisphosphate receptor by calcium.

Authors:  Kozo Hamada; Akiko Terauchi; Katsuhiko Mikoshiba
Journal:  J Biol Chem       Date:  2003-10-30       Impact factor: 5.157

8.  Novel regulation of calcium inhibition of the inositol 1,4,5-trisphosphate receptor calcium-release channel.

Authors:  Don-On Daniel Mak; Sean M J McBride; Nataliya B Petrenko; J Kevin Foskett
Journal:  J Gen Physiol       Date:  2003-11       Impact factor: 4.086

9.  Spontaneous channel activity of the inositol 1,4,5-trisphosphate (InsP3) receptor (InsP3R). Application of allosteric modeling to calcium and InsP3 regulation of InsP3R single-channel gating.

Authors:  Don-On Daniel Mak; Sean M J McBride; J Kevin Foskett
Journal:  J Gen Physiol       Date:  2003-11       Impact factor: 4.086

10.  Cytosolic inositol 1,4,5-trisphosphate dynamics during intracellular calcium oscillations in living cells.

Authors:  Toru Matsu-ura; Takayuki Michikawa; Takafumi Inoue; Atsushi Miyawaki; Manabu Yoshida; Katsuhiko Mikoshiba
Journal:  J Cell Biol       Date:  2006-06-05       Impact factor: 10.539

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  10 in total

Review 1.  Regulatory Mechanisms of Endoplasmic Reticulum Resident IP3 Receptors.

Authors:  Syed Zahid Ali Shah; Deming Zhao; Sher Hayat Khan; Lifeng Yang
Journal:  J Mol Neurosci       Date:  2015-04-10       Impact factor: 3.444

2.  Single-molecule tracking of inositol trisphosphate receptors reveals different motilities and distributions.

Authors:  Ian F Smith; Divya Swaminathan; George D Dickinson; Ian Parker
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

3.  Extracellular histones induce calcium signals in the endothelium of resistance-sized mesenteric arteries and cause loss of endothelium-dependent dilation.

Authors:  Daniel M Collier; Nuria Villalba; Adrian Sackheim; Adrian D Bonev; Zachary D Miller; Jesse S Moore; Bo Shui; Jane C Lee; Frank K Lee; Shaun Reining; Michael I Kotlikoff; Mark T Nelson; Kalev Freeman
Journal:  Am J Physiol Heart Circ Physiol       Date:  2019-03-08       Impact factor: 4.733

4.  Aberrant calcium signaling by transglutaminase-mediated posttranslational modification of inositol 1,4,5-trisphosphate receptors.

Authors:  Kozo Hamada; Akiko Terauchi; Kyoko Nakamura; Takayasu Higo; Nobuyuki Nukina; Nagisa Matsumoto; Chihiro Hisatsune; Takeshi Nakamura; Katsuhiko Mikoshiba
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-08       Impact factor: 11.205

5.  N-terminus oligomerization is conserved in intracellular calcium release channels.

Authors:  Spyros Zissimopoulos; Jason Marsh; Laurence Stannard; Monika Seidel; F Anthony Lai
Journal:  Biochem J       Date:  2014-04-15       Impact factor: 3.857

6.  Microscopic heat pulse-induced calcium dynamics in single WI-38 fibroblasts.

Authors:  Hideki Itoh; Kotaro Oyama; Madoka Suzuki; Shin'ichi Ishiwata
Journal:  Biophysics (Nagoya-shi)       Date:  2014-12-17

7.  Dual-FRET imaging of IP3 and Ca2+ revealed Ca2+-induced IP3 production maintains long lasting Ca2+ oscillations in fertilized mouse eggs.

Authors:  Toru Matsu-Ura; Hideki Shirakawa; Kenichi G N Suzuki; Akitoshi Miyamoto; Kotomi Sugiura; Takayuki Michikawa; Akihiro Kusumi; Katsuhiko Mikoshiba
Journal:  Sci Rep       Date:  2019-03-18       Impact factor: 4.379

8.  Computational quest for understanding the role of astrocyte signaling in synaptic transmission and plasticity.

Authors:  Maurizio De Pittà; Vladislav Volman; Hugues Berry; Vladimir Parpura; Andrea Volterra; Eshel Ben-Jacob
Journal:  Front Comput Neurosci       Date:  2012-12-21       Impact factor: 2.380

9.  Coupling all-atom molecular dynamics simulations of ions in water with Brownian dynamics.

Authors:  Radek Erban
Journal:  Proc Math Phys Eng Sci       Date:  2016-02       Impact factor: 2.704

10.  Structural basis for the regulation of inositol trisphosphate receptors by Ca2+ and IP3.

Authors:  Navid Paknejad; Richard K Hite
Journal:  Nat Struct Mol Biol       Date:  2018-07-16       Impact factor: 15.369

  10 in total

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