Literature DB >> 21875597

The interaction of cofilin with the actin filament.

Diana Y Wong1, David Sept.   

Abstract

Cofilin is a key actin-binding protein that is critical for controlling the assembly of actin within the cell. Here, we present the results of molecular docking and dynamics studies using a muscle actin filament and human cofilin I. Guided by extensive mutagenesis results and other biophysical and structural studies, we arrive at a model for cofilin bound to the actin filament. This predicted structure agrees very well with electron microscopy results for cofilin-decorated filaments, provides molecular insight into how the known F- and G-actin sites on cofilin interact with the filament, and also suggests new interaction sites that may play a role in cofilin binding. The resulting atomic-scale model also helps us understand the molecular function and regulation of cofilin and provides testable data for future experimental and simulation work.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21875597      PMCID: PMC3184344          DOI: 10.1016/j.jmb.2011.08.039

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  41 in total

1.  Cross-linking constraints on F-actin structure.

Authors:  E Kim; W Wriggers; M Phillips; K Kokabi; P A Rubenstein; E Reisler
Journal:  J Mol Biol       Date:  2000-06-02       Impact factor: 5.469

2.  Uncoupling actin filament fragmentation by cofilin from increased subunit turnover.

Authors:  B J Pope; S M Gonsior; S Yeoh; A McGough; A G Weeds
Journal:  J Mol Biol       Date:  2000-05-12       Impact factor: 5.469

3.  Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations.

Authors:  Jeffrey J Gray; Stewart Moughon; Chu Wang; Ora Schueler-Furman; Brian Kuhlman; Carol A Rohl; David Baker
Journal:  J Mol Biol       Date:  2003-08-01       Impact factor: 5.469

4.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

5.  Actin filament remodeling by actin depolymerization factor/cofilin.

Authors:  Jim Pfaendtner; Enrique M De La Cruz; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-05       Impact factor: 11.205

Review 6.  ADF/cofilin: a functional node in cell biology.

Authors:  Barbara W Bernstein; James R Bamburg
Journal:  Trends Cell Biol       Date:  2010-02-03       Impact factor: 20.808

7.  The actin-severing activity of cofilin is exerted by the interplay of three distinct sites on cofilin and essential for cell viability.

Authors:  Kenji Moriyama; Ichiro Yahara
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

8.  Solution structure of human cofilin: actin binding, pH sensitivity, and relationship to actin-depolymerizing factor.

Authors:  Brian J Pope; Karen M Zierler-Gould; Ronald Kühne; Alan G Weeds; Linda J Ball
Journal:  J Biol Chem       Date:  2003-11-18       Impact factor: 5.157

9.  Actin depolymerizing factor stabilizes an existing state of F-actin and can change the tilt of F-actin subunits.

Authors:  V E Galkin; A Orlova; N Lukoyanova; W Wriggers; E H Egelman
Journal:  J Cell Biol       Date:  2001-04-02       Impact factor: 10.539

10.  ADF/cofilin use an intrinsic mode of F-actin instability to disrupt actin filaments.

Authors:  Vitold E Galkin; Albina Orlova; Margaret S VanLoock; Alexander Shvetsov; Emil Reisler; Edward H Egelman
Journal:  J Cell Biol       Date:  2003-12-01       Impact factor: 10.539

View more
  11 in total

Review 1.  Non-channel mechanosensors working at focal adhesion-stress fiber complex.

Authors:  Hiroaki Hirata; Hitoshi Tatsumi; Kimihide Hayakawa; Masahiro Sokabe
Journal:  Pflugers Arch       Date:  2014-06-26       Impact factor: 3.657

Review 2.  Regulated methionine oxidation by monooxygenases.

Authors:  Bruno Manta; Vadim N Gladyshev
Journal:  Free Radic Biol Med       Date:  2017-02-14       Impact factor: 7.376

3.  Molecular origins of cofilin-linked changes in actin filament mechanics.

Authors:  Jun Fan; Marissa G Saunders; Esmael J Haddadian; Karl F Freed; Enrique M De La Cruz; Gregory A Voth
Journal:  J Mol Biol       Date:  2013-01-24       Impact factor: 5.469

4.  Coordination of the filament stabilizing versus destabilizing activities of cofilin through its secondary binding site on actin.

Authors:  Dimitra Aggeli; Erik Kish-Trier; Meng Chi Lin; Brian Haarer; Gino Cingolani; John A Cooper; Stephan Wilkens; David C Amberg
Journal:  Cytoskeleton (Hoboken)       Date:  2014-06-23

5.  GMF severs actin-Arp2/3 complex branch junctions by a cofilin-like mechanism.

Authors:  Casey A Ydenberg; Shae B Padrick; Meredith O Sweeney; Meghal Gandhi; Olga Sokolova; Bruce L Goode
Journal:  Curr Biol       Date:  2013-05-30       Impact factor: 10.834

6.  Computational Study of the Binding Mechanism of Actin-Depolymerizing Factor 1 with Actin in Arabidopsis thaliana.

Authors:  Juan Du; Xue Wang; Chun-Hai Dong; Jian Ming Yang; Xiao Jun Yao
Journal:  PLoS One       Date:  2016-07-14       Impact factor: 3.240

7.  K336I mutant actin alters the structure of neighbouring protomers in filaments and reduces affinity for actin-binding proteins.

Authors:  Nobuhisa Umeki; Keitaro Shibata; Taro Q P Noguchi; Keiko Hirose; Yasushi Sako; Taro Q P Uyeda
Journal:  Sci Rep       Date:  2019-03-29       Impact factor: 4.379

Review 8.  The Actin Regulators Involved in the Function and Related Diseases of Lymphocytes.

Authors:  Jianxuan Sun; Xingyu Zhong; Xiaoyu Fu; Heather Miller; Pamela Lee; Bing Yu; Chaohong Liu
Journal:  Front Immunol       Date:  2022-03-16       Impact factor: 7.561

9.  Mechano-sensing by actin filaments and focal adhesion proteins.

Authors:  Kimihide Hayakawa; Hitoshi Tatsumi; Masahiro Sokabe
Journal:  Commun Integr Biol       Date:  2012-11-01

10.  Aluminum and Tau in Neurofibrillary Tangles in Familial Alzheimer's Disease.

Authors:  Matthew John Mold; Adam O'Farrell; Benjamin Morris; Christopher Exley
Journal:  J Alzheimers Dis Rep       Date:  2021-04-09
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.