Literature DB >> 21870289

Study of cell cycle checkpoints using Xenopus cell-free extracts.

Seetha V Srinivasan1, Jean Gautier.   

Abstract

Cell cycle checkpoints are involved in the coordinated response to DNA damage and thus play a key role in maintaining genome integrity. Several model systems have been developed to study the mechanisms and complexity of checkpoint function. Here we describe the application of cell-free extracts derived from Xenopus eggs as a model system to investigate DNA replication, damage, and checkpoint activation. We outline the preparation of cell-free extracts, DNA substrates and their subsequent use in assays aimed at understanding cell cycle checkpoints, and related processes. Several advances made over the years have enabled the continued use of the Xenopus system to answer a variety of questions in DNA replication, repair and checkpoint signaling. It is anticipated that the versatile Xenopus system is amenable to future modification as well to continue studies attempting to understand these important physiological processes.

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Year:  2011        PMID: 21870289     DOI: 10.1007/978-1-61779-273-1_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  Cell-free transcription in Xenopus egg extract.

Authors:  John K Barrows; David T Long
Journal:  J Biol Chem       Date:  2019-11-15       Impact factor: 5.157

2.  Activation of DSB processing requires phosphorylation of CtIP by ATR.

Authors:  Shaun E Peterson; Yinyin Li; Foon Wu-Baer; Brian T Chait; Richard Baer; Hong Yan; Max E Gottesman; Jean Gautier
Journal:  Mol Cell       Date:  2012-12-27       Impact factor: 17.970

3.  Cdc45 is a critical effector of myc-dependent DNA replication stress.

Authors:  Seetha V Srinivasan; David Dominguez-Sola; Lily C Wang; Olivier Hyrien; Jean Gautier
Journal:  Cell Rep       Date:  2013-05-02       Impact factor: 9.423

4.  Non-homologous end joining repair in Xenopus egg extract.

Authors:  Songli Zhu; Aimin Peng
Journal:  Sci Rep       Date:  2016-06-21       Impact factor: 4.379

Review 5.  An oncologist׳s friend: How Xenopus contributes to cancer research.

Authors:  Laura J A Hardwick; Anna Philpott
Journal:  Dev Biol       Date:  2015-02-19       Impact factor: 3.582

6.  MRN, CtIP, and BRCA1 mediate repair of topoisomerase II-DNA adducts.

Authors:  Tomas Aparicio; Richard Baer; Max Gottesman; Jean Gautier
Journal:  J Cell Biol       Date:  2016-02-15       Impact factor: 10.539

7.  Dna2 initiates resection at clean DNA double-strand breaks.

Authors:  Sharad C Paudyal; Shan Li; Hong Yan; Tony Hunter; Zhongsheng You
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

  7 in total

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