| Literature DB >> 21869457 |
Nadège Minois1, Didac Carmona-Gutierrez, Frank Madeo.
Abstract
Polyamines are polycations that interact with negatively charged molecules such as DNA, RNA and proteins. They play multiple roles in cell growth, survival and proliferation. Changes in polyamine levels have been associated with aging and diseases. Their levels decline continuously with age and polyamine (spermidine or high-polyamine diet) supplementation increases life span in model organisms. Polyamines have also been involved in stress resistance. On the other hand, polyamines are increased in cancer cells and are a target for potential chemotherapeutic agents. In this review, we bring together these various results and draw a picture of the state of our knowledge on the roles of polyamines in aging, stress and diseases.Entities:
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Year: 2011 PMID: 21869457 PMCID: PMC3184975 DOI: 10.18632/aging.100361
Source DB: PubMed Journal: Aging (Albany NY) ISSN: 1945-4589 Impact factor: 5.682
Figure 1Putrescine, spermidine and spermine chemical structure
Figure 2Polyamine metabolism. Green: biosynthesis; blue: catabolism; red: inhibitory protein; black: eIF5A synthesis from spermidine
Number of human homologues for the Escherichia coli and Saccharomyces cerevisiae polyamine transporters
The amino acid sequences were retrieved from the NCBI protein database or the SGD database for polyamine transporters of Escherichia coli and Saccharomyces cerevisiae and subjected to a standard blast search in NCBI (algorithm blastp). The chosen query database was “RefSeq Protein”. The search was restricted to Homo sapiens. For CadB (E. coli) two possible sequences were retrieved (147 and 444 amino acids) and both were used in our search. The shorter protein is part of the longer one. For MdtII no protein but rather a chain A and a chain B of the Mdt protein were found. Both chains were used in our search. For all transporters, only the homologues with an E value below 10-4 were included. Applying these parameters, the list of proteins yielded in this search was big. The results can be subdivided into 3 groups: (i) those proteins without any apparent homolog; (ii) proteins with 1-6 homologs and (iii) proteins with a long list of homologs. While the result for group (i) is clear, the results for group (ii) are all at the edge of the applied threshold and none of them is an overwhelming hit. As for group (iii) the long list might be due to the homology of a conserved functional domain and to the inclusion of all isoforms of a specific hit (see e.g. homologues for PotA in E. coli). The full list of homologues can be found in the Supplementary Table.
| Transporters | Number of human homologues |
|---|---|
| QDR3, TPO4, TPO5 | 1 |
| TPO2, SAM3 | 2 |
| TPO3 | 3 |
| AGP2, DUR3 | 5 |
| TPO1, GAP1 | 6 |
| UGT4 | 19 |
| PotB, PotC, PotH, PotI | 0 |
| PotD, PotF | 1 |
| CadB | 10 |
| PotE | 12 |
| PotA, PotG | 75+ |