Literature DB >> 21868803

Complete genome sequence of the chloromethane-degrading Hyphomicrobium sp. strain MC1.

Stéphane Vuilleumier1, Thierry Nadalig, Muhammad Farhan Ul Haque, Ghislaine Magdelenat, Aurélie Lajus, Sandro Roselli, Emilie E L Muller, Christelle Gruffaz, Valérie Barbe, Claudine Médigue, Françoise Bringel.   

Abstract

Hyphomicrobium sp. strain MC1 is an aerobic methylotroph originally isolated from industrial sewage. This prosthecate bacterium was the first strain reported to grow with chloromethane as the sole carbon and energy source. Its genome, consisting of a single 4.76-Mb chromosome, is the first for a chloromethane-degrading bacterium to be formally reported.
Copyright © 2011, American Society for Microbiology. All Rights Reserved.

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Year:  2011        PMID： 21868803      PMCID： PMC3165642          DOI： 10.1128/JB.05627-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  15 in total

1.  Chloromethane: tetrahydrofolate methyl transfer by two proteins from Methylobacterium chloromethanicum strain CM4.

Authors:  A Studer; E Stupperich; S Vuilleumier; T Leisinger
Journal:  Eur J Biochem       Date:  2001-05

2.  Dichloromethane-degrading bacteria in the genomic age.

Authors:  Emilie E L Muller; Françoise Bringel; Stéphane Vuilleumier
Journal:  Res Microbiol       Date:  2011-02-01       Impact factor: 3.992

3.  Genome sequences of eight morphologically diverse Alphaproteobacteria.

Authors:  Pamela J B Brown; David T Kysela; Aaron Buechlein; Chris Hemmerich; Yves V Brun
Journal:  J Bacteriol       Date:  2011-06-24       Impact factor: 3.490

Review 4.  How half a century of research was required to understand bacterial growth on C1 and C2 compounds; the story of the serine cycle and the ethylmalonyl-CoA pathway.

Authors:  Christopher Anthony
Journal:  Sci Prog       Date:  2011       Impact factor: 2.774

5.  The biology of Hyphomicrobium and other prosthecate, budding bacteria.

Authors:  R L Moore
Journal:  Annu Rev Microbiol       Date:  1981       Impact factor: 15.500

6.  Detection and isolation of chloromethane-degrading bacteria from the Arabidopsis thaliana phyllosphere, and characterization of chloromethane utilization genes.

Authors:  Thierry Nadalig; Muhammad Farhan Ul Haque; Sandro Roselli; Hubert Schaller; Françoise Bringel; Stéphane Vuilleumier
Journal:  FEMS Microbiol Ecol       Date:  2011-06-08       Impact factor: 4.194

7.  Quantification of Hyphomicrobium populations in activated sludge from an industrial wastewater treatment system as determined by 16S rRNA analysis.

Authors:  A C Layton; P N Karanth; C A Lajoie; A J Meyers; I R Gregory; R D Stapleton; D E Taylor; G S Sayler
Journal:  Appl Environ Microbiol       Date:  2000-03       Impact factor: 4.792

8.  Chloromethane-induced genes define a third C1 utilization pathway in Methylobacterium chloromethanicum CM4.

Authors:  Alex Studer; Craig McAnulla; Rainer Büchele; Thomas Leisinger; Stéphane Vuilleumier
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

9.  High quality draft sequences for prokaryotic genomes using a mix of new sequencing technologies.

Authors:  Jean-Marc Aury; Corinne Cruaud; Valérie Barbe; Odile Rogier; Sophie Mangenot; Gaelle Samson; Julie Poulain; Véronique Anthouard; Claude Scarpelli; François Artiguenave; Patrick Wincker
Journal:  BMC Genomics       Date:  2008-12-16       Impact factor: 3.969

10.  Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources.

Authors:  Stéphane Vuilleumier; Ludmila Chistoserdova; Ming-Chun Lee; Françoise Bringel; Aurélie Lajus; Yang Zhou; Benjamin Gourion; Valérie Barbe; Jean Chang; Stéphane Cruveiller; Carole Dossat; Will Gillett; Christelle Gruffaz; Eric Haugen; Edith Hourcade; Ruth Levy; Sophie Mangenot; Emilie Muller; Thierry Nadalig; Marco Pagni; Christian Penny; Rémi Peyraud; David G Robinson; David Roche; Zoé Rouy; Channakhone Saenampechek; Grégory Salvignol; David Vallenet; Zaining Wu; Christopher J Marx; Julia A Vorholt; Maynard V Olson; Rajinder Kaul; Jean Weissenbach; Claudine Médigue; Mary E Lidstrom
Journal:  PLoS One       Date:  2009-05-18       Impact factor: 3.240
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  11 in total

1.  Microbial compositions and metabolic interactions in one- and two-phase partitioning airlift bioreactors treating a complex VOC mixture.

Authors:  Chao Wu; Peilun Xu; Yinfeng Xia; Wei Li; Sujing Li; Xiangqian Wang
Journal:  J Ind Microbiol Biotechnol       Date:  2017-06-21       Impact factor: 3.346

2.  Methane utilizing plant growth-promoting microbial diversity analysis of flooded paddy ecosystem of India.

Authors:  Vijaya Rani; Arti Bhatia; Lata Nain; Govind Singh Tomar; Rajeev Kaushik
Journal:  World J Microbiol Biotechnol       Date:  2021-02-23       Impact factor: 3.312

3.  The (d)evolution of methanotrophy in the Beijerinckiaceae--a comparative genomics analysis.

Authors:  Ivica Tamas; Angela V Smirnova; Zhiguo He; Peter F Dunfield
Journal:  ISME J       Date:  2013-08-29       Impact factor: 10.302

4.  Hydrogen and carbon isotope fractionation during degradation of chloromethane by methylotrophic bacteria.

Authors:  Thierry Nadalig; Markus Greule; Françoise Bringel; Stéphane Vuilleumier; Frank Keppler
Journal:  Microbiologyopen       Date:  2013-09-08       Impact factor: 3.139

5.  Probing the diversity of chloromethane-degrading bacteria by comparative genomics and isotopic fractionation.

Authors:  Thierry Nadalig; Markus Greule; Françoise Bringel; Frank Keppler; Stéphane Vuilleumier
Journal:  Front Microbiol       Date:  2014-10-15       Impact factor: 5.640

6.  Transfer of a Catabolic Pathway for Chloromethane in Methylobacterium Strains Highlights Different Limitations for Growth with Chloromethane or with Dichloromethane.

Authors:  Joshua K Michener; Stéphane Vuilleumier; Françoise Bringel; Christopher J Marx
Journal:  Front Microbiol       Date:  2016-07-19       Impact factor: 5.640

7.  Geochemical and Microbial Community Attributes in Relation to Hyporheic Zone Geological Facies.

Authors:  Z Hou; W C Nelson; J C Stegen; C J Murray; E Arntzen; A R Crump; D W Kennedy; M C Perkins; T D Scheibe; J K Fredrickson; J M Zachara
Journal:  Sci Rep       Date:  2017-09-20       Impact factor: 4.379

8.  The 380 kb pCMU01 plasmid encodes chloromethane utilization genes and redundant genes for vitamin B12- and tetrahydrofolate-dependent chloromethane metabolism in Methylobacterium extorquens CM4: a proteomic and bioinformatics study.

Authors:  Sandro Roselli; Thierry Nadalig; Stéphane Vuilleumier; Françoise Bringel
Journal:  PLoS One       Date:  2013-04-09       Impact factor: 3.240

9.  Complete Genome Sequence of Hyphomicrobium nitrativorans Strain NL23, a Denitrifying Bacterium Isolated from Biofilm of a Methanol-Fed Denitrification System Treating Seawater at the Montreal Biodome.

Authors:  Christine Martineau; Céline Villeneuve; Florian Mauffrey; Richard Villemur
Journal:  Genome Announc       Date:  2014-01-16

10.  Bacterial Community Dynamics in Dichloromethane-Contaminated Groundwater Undergoing Natural Attenuation.

Authors:  Justin Wright; Veronica Kirchner; William Bernard; Nikea Ulrich; Christopher McLimans; Maria F Campa; Terry Hazen; Tamzen Macbeth; David Marabello; Jacob McDermott; Rachel Mackelprang; Kimberly Roth; Regina Lamendella
Journal:  Front Microbiol       Date:  2017-11-22       Impact factor: 5.640
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