Literature DB >> 21862861

Microprobing the molecular spatial distribution and structural architecture of feed-type sorghum seed tissue (Sorghum Bicolor L.) using the synchrotron radiation infrared microspectroscopy technique.

Peiqiang Yu1.   

Abstract

Sorghum seed (Sorghum bicolor L.) has unique degradation and fermentation behaviours compared with other cereal grains such as wheat, barley and corn. This may be related to its cell and cell-wall architecture. The advanced synchrotron radiation infrared microspectroscopy (SR-IMS) technique enables the study of cell or living cell biochemistry within cellular dimensions. The objective of this study was to use the SR-IMS imaging technique to microprobe molecular spatial distribution and cell architecture of the sorghum seed tissue comprehensively. High-density mapping was carried out using SR-IMS on beamline U2B at the National Synchrotron Light Source (Brookhaven National Laboratory, NY, USA). Molecular images were systematically recorded from the outside to the inside of the seed tissue under various chemical functional groups and their ratios [peaks at ∼1725 (carbonyl C=O ester), 1650 (amide I), 1657 (protein secondary structure α-helix), 1628 (protein secondary structure β-sheet), 1550 (amide II), 1515 (aromatic compounds of lignin), 1428, 1371, 1245 (cellulosic compounds in plant seed tissue), 1025 (non-structural CHO, starch granules), 1246 (cellulosic material), 1160 (CHO), 1150 (CHO), 1080 (CHO), 930 (CHO), 860 (CHO), 3350 (OH and NH stretching), 2960 (CH(3) anti-symmetric), 2929 (CH(2) anti-symmetric), 2877 (CH(3) symmetric) and 2848 cm(-1) (CH(2) asymmetric)]. The relative protein secondary structure α-helix to β-sheet ratio image, protein amide I to starch granule ratio image, and anti-symmetric CH(3) to CH(2) ratio image were also investigated within the intact sorghum seed tissue. The results showed unique cell architecture, and the molecular spatial distribution and intensity in the sorghum seed tissue (which were analyzed through microprobe molecular imaging) were generated using SR-IMS. This imaging technique and methodology has high potential and could be used for scientists to develop specific cereal grain varieties with targeted food and feed quality, and can also be used to monitor the degree of grain maturity, grain damage, the fate of organic contaminants and the effect of chemical treatment on plant and grain seeds.

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Year:  2011        PMID: 21862861      PMCID: PMC3161819          DOI: 10.1107/S0909049511023727

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  19 in total

1.  Center for Synchrotron Biosciences' U2B beamline: an international resource for biological infrared spectroscopy.

Authors:  N S Marinkovic; R Huang; P Bromberg; M Sullivan; J Toomey; L M Miller; E Sperber; S Moshe; K W Jones; E Chouparova; S Lappi; S Franzen; M R Chance
Journal:  J Synchrotron Radiat       Date:  2002-06-30       Impact factor: 2.616

2.  Plant-based food and feed protein structure changes induced by gene-transformation, heating and bio-ethanol processing: a synchrotron-based molecular structure and nutrition research program.

Authors:  Peiqiang Yu
Journal:  Mol Nutr Food Res       Date:  2010-11       Impact factor: 5.914

Review 3.  Application of advanced synchrotron radiation-based Fourier transform infrared (SR-FTIR) microspectroscopy to animal nutrition and feed science: a novel approach.

Authors:  P Yu
Journal:  Br J Nutr       Date:  2004-12       Impact factor: 3.718

4.  Application of cluster analysis (CLA) in feed chemical imaging to accurately reveal structural-chemical features of feeds and plants within cellular dimension.

Authors:  Peiqiang Yu
Journal:  J Agric Food Chem       Date:  2005-04-20       Impact factor: 5.279

5.  Multicomponent peak modeling of protein secondary structures: comparison of gaussian with lorentzian analytical methods for plant feed and seed molecular biology and chemistry research.

Authors:  Peiqiang Yu
Journal:  Appl Spectrosc       Date:  2005-11       Impact factor: 2.388

Review 6.  Chemical imaging of biological tissue with synchrotron infrared light.

Authors:  Lisa M Miller; Paul Dumas
Journal:  Biochim Biophys Acta       Date:  2006-04-21

7.  Microchemical structure of soybean seeds revealed in situ by ultraspatially resolved synchrotron Fourier transformed infrared microspectroscopy.

Authors:  Lukasz N Pietrzak; S Shea Miller
Journal:  J Agric Food Chem       Date:  2005-11-30       Impact factor: 5.279

8.  Ultraspatially-resolved synchrotron infrared microspectroscopy of plant tissue in situ.

Authors:  D L Wetzel; A J Eilert; L N Pietrzak; S S Miller; J A Sweat
Journal:  Cell Mol Biol (Noisy-le-grand)       Date:  1998-02       Impact factor: 1.770

Review 9.  The use and misuse of FTIR spectroscopy in the determination of protein structure.

Authors:  M Jackson; H H Mantsch
Journal:  Crit Rev Biochem Mol Biol       Date:  1995       Impact factor: 8.250

10.  Fourier transform infrared microspectroscopy detects changes in protein secondary structure associated with desiccation tolerance in developing maize embryos

Authors: 
Journal:  Plant Physiol       Date:  1998-03       Impact factor: 8.340

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  1 in total

1.  Vibrational microspectroscopy enables chemical characterization of single pollen grains as well as comparative analysis of plant species based on pollen ultrastructure.

Authors:  Boris Zimmermann; Murat Bağcıoğlu; Christophe Sandt; Achim Kohler
Journal:  Planta       Date:  2015-08-20       Impact factor: 4.116

  1 in total

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