Literature DB >> 21860449

Protein dynamics: whispering within.

Rafael Brüschweiler.   

Abstract

Dynamic communication between atoms within folded proteins is potentially important for function, but its measurement has been a challenge. Now, a combined NMR and modelling study provides insights on the presence and strengths of such correlations.

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Year:  2011        PMID： 21860449     DOI： 10.1038/nchem.1124

Source DB:  PubMed          Journal:  Nat Chem        ISSN： 1755-4330            Impact factor:   24.427


  10 in total

1.  Correlated motions of successive amide N-H bonds in proteins.

Authors:  Philippe Pelupessy; Sapna Ravindranathan; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

2.  How much backbone motion in ubiquitin is required to account for dipolar coupling data measured in multiple alignment media as assessed by independent cross-validation?

Authors:  G Marius Clore; Charles D Schwieters
Journal:  J Am Chem Soc       Date:  2004-03-10       Impact factor: 15.419

3.  Entropy localization in proteins.

Authors:  Da-Wei Li; Scott A Showalter; Rafael Brüschweiler
Journal:  J Phys Chem B       Date:  2010-11-15       Impact factor: 2.991

4.  Identification of slow correlated motions in proteins using residual dipolar and hydrogen-bond scalar couplings.

Authors:  Guillaume Bouvignies; Pau Bernadó; Sebastian Meier; Kyuil Cho; Stephan Grzesiek; Rafael Brüschweiler; Martin Blackledge
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-19       Impact factor: 11.205

Review 5.  Long-timescale molecular dynamics simulations of protein structure and function.

Authors:  John L Klepeis; Kresten Lindorff-Larsen; Ron O Dror; David E Shaw
Journal:  Curr Opin Struct Biol       Date:  2009-04-08       Impact factor: 6.809

6.  Toward an accurate determination of free energy landscapes in solution states of proteins.

Authors:  Alfonso De Simone; Barbara Richter; Xavier Salvatella; Michele Vendruscolo
Journal:  J Am Chem Soc       Date:  2009-03-25       Impact factor: 15.419

7.  Short-range coherence of internal protein dynamics revealed by high-precision in silico study.

Authors:  Da-Wei Li; Dan Meng; Rafael Brüschweiler
Journal:  J Am Chem Soc       Date:  2009-10-21       Impact factor: 15.419

Review 8.  Nuclear magnetic resonance provides a quantitative description of protein conformational flexibility on physiologically important time scales.

Authors:  Loïc Salmon; Guillaume Bouvignies; Phineus Markwick; Martin Blackledge
Journal:  Biochemistry       Date:  2011-03-21       Impact factor: 3.162

9.  Mapping allostery through the covariance analysis of NMR chemical shifts.

Authors:  Rajeevan Selvaratnam; Somenath Chowdhury; Bryan VanSchouwen; Giuseppe Melacini
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

10.  Weak long-range correlated motions in a surface patch of ubiquitin involved in molecular recognition.

Authors:  R Bryn Fenwick; Santi Esteban-Martín; Barbara Richter; Donghan Lee; Korvin F A Walter; Dragomir Milovanovic; Stefan Becker; Nils A Lakomek; Christian Griesinger; Xavier Salvatella
Journal:  J Am Chem Soc       Date:  2011-06-20       Impact factor: 15.419
  10 in total
  3 in total

1.  The molecular origin of the MMR-dependent apoptosis pathway from dynamics analysis of MutSα-DNA complexes.

Authors:  Lacramioara Negureanu; Freddie R Salsbury
Journal:  J Biomol Struct Dyn       Date:  2012-06-18

2.  Significance of triple torsional correlations in proteins.

Authors:  Shiyang Long; Jianwei Wang; Pu Tian
Journal:  RSC Adv       Date:  2019-05-07       Impact factor: 4.036

3.  Correlated inter-domain motions in adenylate kinase.

Authors:  Santiago Esteban-Martín; Robert Bryn Fenwick; Jörgen Ådén; Benjamin Cossins; Carlos W Bertoncini; Victor Guallar; Magnus Wolf-Watz; Xavier Salvatella
Journal:  PLoS Comput Biol       Date:  2014-07-31       Impact factor: 4.475
  3 in total

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