Literature DB >> 21848995

Seeking gene candidates responsible for developmental origins of health and disease.

Tetsuo Ogawa1, Randeep Rakwal, Junko Shibato, Chika Sawa, Tomomi Saito, Aya Murayama, Makiko Kuwagata, Haruaki Kageyama, Michiko Yagi, Kazue Satoh, Seiji Shioda.   

Abstract

Human epidemiological evidence has led scientists to theorize that undernutrition during gestation is an important early origin of adult diseases. Animal models have successfully demonstrated that maternal diet could contribute to some adult diseases. Undernutrition is perceived harmful in pregnant women, whereas calorie restriction is a strategy proven to extend healthy and maximum lifespan in adult. This diagrammatically opposite effect of nutritional condition might provide us with hints to search for genes underlying health conditions. Here, we have initiated a study examining the effect of undernutrition on maternal and fetal livers, utilizing high-throughput DNA microarray analysis for screening genome-wide changes in their transcriptomes. Briefly, pregnant mice were exposed to food deprivation (FD) on gestation day (GD) 17, and cesarean section was performed on GD18. Control mice were supplied with chow ad libitum until sacrifice. Total RNA extracted from mother and fetal livers for each control and treatment (FD) was analyzed with an Agilent mouse whole genome DNA chip. A total of 3058 and 3126 up- (>1.5-fold) and down- (<0.75-fold) regulated genes, and 1475 and 1225 up- (>1.5-fold) and down- (<0.75-fold) regulated genes showed differential expression at the mRNA level, in the maternal and fetal livers, respectively. Interestingly, 103 genes up-regulated in the mother were down-regulated in the fetus, whereas 108 down-regulated maternal genes were up-regulated in the fetus; these 211 genes are potential candidates related to longevity or health. The role of some of these genes, in context of the proposed mechanisms for developmental origins of health and disease is discussed.
© 2011 The Authors. Congenital Anomalies © 2011 Japanese Teratology Society.

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Year:  2011        PMID: 21848995     DOI: 10.1111/j.1741-4520.2011.00315.x

Source DB:  PubMed          Journal:  Congenit Anom (Kyoto)        ISSN: 0914-3505            Impact factor:   1.409


  11 in total

1.  Comparative analysis of seed transcriptomes of ambient ozone-fumigated 2 different rice cultivars.

Authors:  Kyoungwon Cho; Junko Shibato; Akihiro Kubo; Yoshihisa Kohno; Kouji Satoh; Shoshi Kikuchi; Abhijit Sarkar; Ganesh Kumar Agrawal; Randeep Rakwal
Journal:  Plant Signal Behav       Date:  2013-09-11

2.  DNA microarray unravels rapid changes in transcriptome of MK-801 treated rat brain.

Authors:  Yuka Kobayashi; Sofya P Kulikova; Junko Shibato; Randeep Rakwal; Hiroyuki Satoh; Didier Pinault; Yoshinori Masuo
Journal:  World J Biol Chem       Date:  2015-11-26

3.  Unraveling the ischemic brain transcriptome in a permanent middle cerebral artery occlusion mouse model by DNA microarray analysis.

Authors:  Motohide Hori; Tomoya Nakamachi; Randeep Rakwal; Junko Shibato; Keisuke Nakamura; Yoshihiro Wada; Daisuke Tsuchikawa; Akira Yoshikawa; Keiji Tamaki; Seiji Shioda
Journal:  Dis Model Mech       Date:  2011-10-20       Impact factor: 5.758

4.  Two-color Dye-swap DNA Microarray approach toward confident gene expression profiling in PMCAO mouse model for ischemia-related and PACAP38-influenced genes.

Authors:  Motohide Hori; Junko Shibato; Tomoya Nakamachi; Randeep Rakwal; Tetsuo Ogawa; Seiji Shioda; Satoshi Numazawa
Journal:  Genom Data       Date:  2015-01-22

5.  Unraveling the Rat Intestine, Spleen and Liver Genome-Wide Transcriptome after the Oral Administration of Lavender Oil by a Two-Color Dye-Swap DNA Microarray Approach.

Authors:  Hiroko Kubo; Junko Shibato; Tomomi Saito; Tetsuo Ogawa; Randeep Rakwal; Seiji Shioda
Journal:  PLoS One       Date:  2015-07-10       Impact factor: 3.240

6.  DNA microarray-based analysis of voluntary resistance wheel running reveals novel transcriptome leading robust hippocampal plasticity.

Authors:  Min Chul Lee; Randeep Rakwal; Junko Shibato; Koshiro Inoue; Hyukki Chang; Hideaki Soya
Journal:  Physiol Rep       Date:  2014-11-20

7.  Unraveling the Specific Ischemic Core and Penumbra Transcriptome in the Permanent Middle Cerebral Artery Occlusion Mouse Model Brain Treated with the Neuropeptide PACAP38.

Authors:  Motohide Hori; Tomoya Nakamachi; Junko Shibato; Randeep Rakwal; Seiji Shioda; Satoshi Numazawa
Journal:  Microarrays (Basel)       Date:  2015-01-21

8.  Transcriptomics and proteomics analyses of the PACAP38 influenced ischemic brain in permanent middle cerebral artery occlusion model mice.

Authors:  Motohide Hori; Tomoya Nakamachi; Randeep Rakwal; Junko Shibato; Tetsuo Ogawa; Toshihiro Aiuchi; Tatsuaki Tsuruyama; Keiji Tamaki; Seiji Shioda
Journal:  J Neuroinflammation       Date:  2012-11-23       Impact factor: 8.322

9.  Comprehensive analysis of neonatal versus adult unilateral decortication in a mouse model using behavioral, neuroanatomical, and DNA microarray approaches.

Authors:  Akira Yoshikawa; Tomoya Nakamachi; Junko Shibato; Randeep Rakwal; Seiji Shioda
Journal:  Int J Mol Sci       Date:  2014-12-05       Impact factor: 5.923

10.  Vitamin D related genes in lung development and asthma pathogenesis.

Authors:  Alvin T Kho; Sunita Sharma; Weiliang Qiu; Roger Gaedigk; Barbara Klanderman; Simin Niu; Chris Anderson; James S Leeder; Scott T Weiss; Kelan G Tantisira
Journal:  BMC Med Genomics       Date:  2013-11-05       Impact factor: 3.063

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