Literature DB >> 21847691

DNA content variation in monilophytes and lycophytes: large genomes that are not endopolyploid.

Jillian D Bainard1, Thomas A Henry, Luke D Bainard, Steven G Newmaster.   

Abstract

Less than 1% of known monilophytes and lycophytes have a genome size estimate, and substantially less is known about the presence and prevalence of endopolyploid nuclei in these groups. Thirty-one monilophyte species (including three horsetails) and six lycophyte species were collected in Ontario, Canada. Using flow cytometry, genome size and degree of endopolyploidy were estimated for 37 species. Across the five orders covered, 1Cx-values averaged 4.2 pg in the Lycopodiales, 18.1 pg for the Equisetales, 5.06 pg for a single representative of the Ophioglossales, 14.3 pg for the Osmundales, and 7.06 pg for the Polypodiales. There was no indication of endoreduplication in any of the leaf, stem, or root tissue analyzed. This information is essential to our understanding of DNA content evolution in land plants.

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Year:  2011        PMID: 21847691     DOI: 10.1007/s10577-011-9228-1

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  26 in total

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Authors:  K M Pryer; H Schneider; A R Smith; R Cranfill; P G Wolf; J S Hunt; S D Sipes
Journal:  Nature       Date:  2001-02-01       Impact factor: 49.962

2.  Nuclear DNA content and genome size of trout and human.

Authors:  J Dolezel; J Bartos; H Voglmayr; J Greilhuber
Journal:  Cytometry A       Date:  2003-02       Impact factor: 4.355

3.  Effects of caffeine and chlorogenic acid on propidium iodide accessibility to DNA: consequences on genome size evaluation in coffee tree.

Authors:  M Noirot; P Barre; C Duperray; J Louarn; S Hamon
Journal:  Ann Bot       Date:  2003-08       Impact factor: 4.357

4.  Estimation of nuclear DNA content in plants using flow cytometry.

Authors:  Jaroslav Dolezel; Johann Greilhuber; Jan Suda
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms.

Authors:  A Brandes; J S Heslop-Harrison; A Kamm; S Kubis; R L Doudrick; T Schmidt
Journal:  Plant Mol Biol       Date:  1997-01       Impact factor: 4.076

6.  Comparison of four nuclear isolation buffers for plant DNA flow cytometry.

Authors:  João Loureiro; Eleazar Rodriguez; Jaroslav Dolezel; Conceição Santos
Journal:  Ann Bot       Date:  2006-07-04       Impact factor: 4.357

7.  Methodology significantly affects genome size estimates: quantitative evidence using bryophytes.

Authors:  Jillian D Bainard; Aron J Fazekas; Steven G Newmaster
Journal:  Cytometry A       Date:  2010-08       Impact factor: 4.355

8.  Endoreplication in Anemia phyllitidis coincides with the development of gametophytes and male sex.

Authors:  Andrzej Kaźmierczak
Journal:  Physiol Plant       Date:  2009-11-09       Impact factor: 4.500

9.  Nuclear genome size in Selaginella.

Authors:  Damon P Little; Robbin C Moran; Eric D Brenner; Dennis Wm Stevenson
Journal:  Genome       Date:  2007-04       Impact factor: 2.166

10.  Construction of a bacterial artificial chromosome library from the spikemoss Selaginella moellendorffii: a new resource for plant comparative genomics.

Authors:  Wenming Wang; Milos Tanurdzic; Meizhong Luo; Nicholas Sisneros; Hye Ran Kim; Jing-Ke Weng; Dave Kudrna; Christopher Mueller; K Arumuganathan; John Carlson; Clint Chapple; Claude de Pamphilis; Dina Mandoli; Jeff Tomkins; Rod A Wing; Jo Ann Banks
Journal:  BMC Plant Biol       Date:  2005-06-14       Impact factor: 4.215

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  12 in total

1.  An Exploration into Fern Genome Space.

Authors:  Paul G Wolf; Emily B Sessa; Daniel Blaine Marchant; Fay-Wei Li; Carl J Rothfels; Erin M Sigel; Matthew A Gitzendanner; Clayton J Visger; Jo Ann Banks; Douglas E Soltis; Pamela S Soltis; Kathleen M Pryer; Joshua P Der
Journal:  Genome Biol Evol       Date:  2015-08-26       Impact factor: 3.416

2.  Genome size and endopolyploidy evolution across the moss phylogeny.

Authors:  Jillian D Bainard; Steven G Newmaster; Jessica M Budke
Journal:  Ann Bot       Date:  2020-03-29       Impact factor: 4.357

3.  Biogeography and genome size evolution of the oldest extant vascular plant genus, Equisetum (Equisetaceae).

Authors:  Maarten J M Christenhusz; Mark W Chase; Michael F Fay; Oriane Hidalgo; Ilia J Leitch; Jaume Pellicer; Juan Viruel
Journal:  Ann Bot       Date:  2021-04-17       Impact factor: 4.357

4.  Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae).

Authors:  Robert J Dyer; Jaume Pellicer; Vincent Savolainen; Ilia J Leitch; Harald Schneider
Journal:  BMC Plant Biol       Date:  2013-12-20       Impact factor: 4.215

Review 5.  Between two fern genomes.

Authors:  Emily B Sessa; Jo Ann Banks; Michael S Barker; Joshua P Der; Aaron M Duffy; Sean W Graham; Mitsuyasu Hasebe; Jane Langdale; Fay-Wei Li; D Blaine Marchant; Kathleen M Pryer; Carl J Rothfels; Stanley J Roux; Mari L Salmi; Erin M Sigel; Douglas E Soltis; Pamela S Soltis; Dennis W Stevenson; Paul G Wolf
Journal:  Gigascience       Date:  2014-09-25       Impact factor: 6.524

6.  Origins and diversity of a cosmopolitan fern genus on an island archipelago.

Authors:  Paul G Wolf; Carol A Rowe; Joshua P Der; Martin P Schilling; Clayton J Visger; John A Thomson
Journal:  AoB Plants       Date:  2015-10-20       Impact factor: 3.276

7.  Spatial and Temporal Patterns of Endopolyploidy in Mosses.

Authors:  Marianna Paľová; Dajana Ručová; Michal Goga; Vladislav Kolarčik
Journal:  Genes (Basel)       Date:  2020-12-27       Impact factor: 4.096

Review 8.  Ferns: the missing link in shoot evolution and development.

Authors:  Andrew R G Plackett; Verónica S Di Stilio; Jane A Langdale
Journal:  Front Plant Sci       Date:  2015-11-06       Impact factor: 5.753

9.  The Small Nuclear Genomes of Selaginella Are Associated with a Low Rate of Genome Size Evolution.

Authors:  Anthony E Baniaga; Nils Arrigo; Michael S Barker
Journal:  Genome Biol Evol       Date:  2016-06-03       Impact factor: 3.416

10.  Developmental analyses of divarications in leaves of an aquatic fern Microsorum pteropus and its varieties.

Authors:  Saori Miyoshi; Seisuke Kimura; Ryo Ootsuki; Takumi Higaki; Akiko Nakamasu
Journal:  PLoS One       Date:  2019-01-25       Impact factor: 3.240

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