Literature DB >> 21847481

Proton transfer events in GFP.

Mariangela Di Donato1, Luuk J G W van Wilderen, Ivo H M Van Stokkum, Thomas Cohen Stuart, John T M Kennis, Klaas J Hellingwerf, Rienk van Grondelle, Marie Louise Groot.   

Abstract

Proton transfer is one of the most important elementary processes in biology. Green fluorescent protein (GFP) serves as an important model system to elucidate the mechanistic details of this reaction, because in GFP proton transfer can be induced by light absorption. Illumination initiates proton transfer through a 'proton-wire', formed by the chromophore (the proton donor), water molecule W22, Ser205 and Glu222 (the acceptor), on a picosecond time scale. To obtain a more refined view of this process, we have used a combined approach of time resolved mid-infrared spectroscopy and visible pump-dump-probe spectroscopy to resolve with atomic resolution how and how fast protons move through this wire. Our results indicate that absorption of light by GFP induces in 3 ps (10 ps in D(2)O) a shift of the equilibrium positions of all protons in the H-bonded network, leading to a partial protonation of Glu222 and to a so-called low barrier hydrogen bond (LBHB) for the chromophore's proton, giving rise to dual emission at 475 and 508 nm. This state is followed by a repositioning of the protons on the wire in 10 ps (80 ps in D(2)O), ultimately forming the fully deprotonated chromophore and protonated Glu222.

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Year:  2011        PMID: 21847481     DOI: 10.1039/c1cp20387h

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  11 in total

1.  Bistable isoelectric point photoswitching in green fluorescent proteins observed by dynamic immunoprobed isoelectric focusing.

Authors:  Alex J Hughes; Augusto M Tentori; Amy E Herr
Journal:  J Am Chem Soc       Date:  2012-10-10       Impact factor: 15.419

Review 2.  Time-resolved infrared absorption spectroscopy applied to photoinduced reactions: how and why.

Authors:  Alberto Mezzetti; Josefine Schnee; Andrea Lapini; Mariangela Di Donato
Journal:  Photochem Photobiol Sci       Date:  2022-02-21       Impact factor: 3.982

Review 3.  Beta-barrel scaffold of fluorescent proteins: folding, stability and role in chromophore formation.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladislav V Verkhusha; Konstantin K Turoverov
Journal:  Int Rev Cell Mol Biol       Date:  2013       Impact factor: 6.813

Review 4.  Low barrier hydrogen bonds in protein structure and function.

Authors:  M Trent Kemp; Eric M Lewandowski; Yu Chen
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2020-10-23       Impact factor: 3.036

5.  A Hidden State in Light-Harvesting Complex II Revealed By Multipulse Spectroscopy.

Authors:  Bart van Oort; Rienk van Grondelle; Ivo H M van Stokkum
Journal:  J Phys Chem B       Date:  2015-04-10       Impact factor: 2.991

6.  Sensitivity of superfolder GFP to ionic agents.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladislav V Verkhusha; Konstantin K Turoverov
Journal:  PLoS One       Date:  2014-10-27       Impact factor: 3.240

7.  Peculiarities of the Super-Folder GFP Folding in a Crowded Milieu.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladimir N Uversky; Konstantin K Turoverov
Journal:  Int J Mol Sci       Date:  2016-10-28       Impact factor: 5.923

8.  Reaction dynamics of the chimeric channelrhodopsin C1C2.

Authors:  Yusaku Hontani; Marco Marazzi; Katja Stehfest; Tilo Mathes; Ivo H M van Stokkum; Marcus Elstner; Peter Hegemann; John T M Kennis
Journal:  Sci Rep       Date:  2017-08-03       Impact factor: 4.379

9.  The mechanism of a green fluorescent protein proton shuttle unveiled in the time-resolved frequency domain by excited state ab initio dynamics.

Authors:  Greta Donati; Alessio Petrone; Pasquale Caruso; Nadia Rega
Journal:  Chem Sci       Date:  2018-01-02       Impact factor: 9.825

10.  Mechanism of ArcLight derived GEVIs involves electrostatic interactions that can affect proton wires.

Authors:  Bok Eum Kang; Lee Min Leong; Yoonkyung Kim; Kenichi Miyazaki; William N Ross; Bradley J Baker
Journal:  Biophys J       Date:  2021-03-17       Impact factor: 4.033

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