Literature DB >> 21845960

Identification and validation of reference genes for quantitative real-time polymerase chain reaction in Cimex lectularius.

Praveen Mamidala1, Swapna P Rajarapu, Susan C Jones, Omprakash Mittapalli.   

Abstract

Quantitative real-time polymerase chain reaction (qRT-PCR) has emerged as robust methodology for gene expression studies, but reference genes are crucial for accurate normalization. Commonly used reference genes are housekeeping genes that are thought to be nonregulated; however, their expression can be unstable across different experimental conditions. We report the identification and validation of suitable reference genes in the bed bug, Cimex lectularius, by using qRT-PCR. The expression stability of eight reference genes in different tissues (abdominal cuticle, midgut, Malpighian tubules, and ovary) and developmental stages (early instar nymphs, late instar nymphs, and adults) of pesticide-susceptible and pesticide-exposed C. lectularius were analyzed using geNorm, NormFinder, and BestKeeper. Overall expression analysis of the eight reference genes revealed significant variation among samples, indicating the necessity of validating suitable reference genes for accurate quantification of mRNA transcripts. Ribosomal protein (RPL18) exhibited the most stable gene expression across all the tissue and developmental-stage samples; a-tubulin revealed the least stability across all of the samples examined. Thus, we recommend RPL18 as a suitable reference gene for normalization in gene expression studies of C. lectularius.

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Year:  2011        PMID: 21845960     DOI: 10.1603/me10262

Source DB:  PubMed          Journal:  J Med Entomol        ISSN: 0022-2585            Impact factor:   2.278


  28 in total

1.  Discrimination between lineage-specific shelters by bat- and human-associated bed bugs does not constitute a stable reproductive barrier.

Authors:  Ondřej Balvín; Tomáš Bartonička; Kateřina Pilařová; Zachary DeVries; Coby Schal
Journal:  Parasitol Res       Date:  2016-11-09       Impact factor: 2.289

2.  Validation of internal reference genes for real-time quantitative polymerase chain reaction studies in the tick, Ixodes scapularis (Acari: Ixodidae).

Authors:  Juraj Koci; Ladislav Simo; Yoonseong Park
Journal:  J Med Entomol       Date:  2013-01       Impact factor: 2.278

3.  RNA-Seq and molecular docking reveal multi-level pesticide resistance in the bed bug.

Authors:  Praveen Mamidala; Asela J Wijeratne; Saranga Wijeratne; Karl Kornacker; Babu Sudhamalla; Loren J Rivera-Vega; Andrew Hoelmer; Tea Meulia; Susan C Jones; Omprakash Mittapalli
Journal:  BMC Genomics       Date:  2012-01-06       Impact factor: 3.969

4.  Transcriptome of the plant virus vector Graminella nigrifrons, and the molecular interactions of maize fine streak rhabdovirus transmission.

Authors:  Yuting Chen; Bryan J Cassone; Xiaodong Bai; Margaret G Redinbaugh; Andrew P Michel
Journal:  PLoS One       Date:  2012-07-12       Impact factor: 3.240

5.  Evaluation of Housekeeping Genes for Quantitative Real-Time PCR Analysis of Bradysia odoriphaga (Diptera: Sciaridae).

Authors:  Caihua Shi; Fengshan Yang; Xun Zhu; Erxia Du; Yuting Yang; Shaoli Wang; Qingjun Wu; Youjun Zhang
Journal:  Int J Mol Sci       Date:  2016-07-07       Impact factor: 5.923

6.  Validation of reference genes in Solenopsis invicta in different developmental stages, castes and tissues.

Authors:  Daifeng Cheng; Zhiling Zhang; Xiaofang He; Guangwen Liang
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

7.  Validation of reference genes for expression analysis by quantitative real-time PCR in Leptinotarsa decemlineata (Say).

Authors:  Xiao-Qin Shi; Wen-Chao Guo; Pin-Jun Wan; Li-Tao Zhou; Xiang-Liang Ren; Tursun Ahmat; Kai-Yun Fu; Guo-Qing Li
Journal:  BMC Res Notes       Date:  2013-03-13

8.  Identification and validation of reference genes for gene expression analysis using quantitative PCR in Spodoptera litura (Lepidoptera: Noctuidae).

Authors:  Yanhui Lu; Miao Yuan; Xiwu Gao; Tinghao Kang; Sha Zhan; Hu Wan; Jianhong Li
Journal:  PLoS One       Date:  2013-07-09       Impact factor: 3.240

9.  Identification and validation of reference genes for quantitative real-time PCR in Drosophila suzukii (Diptera: Drosophilidae).

Authors:  Yifan Zhai; Qingcai Lin; Xianhong Zhou; Xiaoyan Zhang; Tingli Liu; Yi Yu
Journal:  PLoS One       Date:  2014-09-08       Impact factor: 3.240

10.  Reference genes for accessing differential expression among developmental stages and analysis of differential expression of OBP genes in Anastrepha obliqua.

Authors:  Aline Minali Nakamura; Samira Chahad-Ehlers; André Luís A Lima; Cristiane Hayumi Taniguti; Iderval Sobrinho; Felipe Rafael Torres; Reinaldo Alves de Brito
Journal:  Sci Rep       Date:  2016-01-28       Impact factor: 4.379

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