Literature DB >> 21840740

Dynamics of biomolecules from picoseconds to seconds at atomic resolution.

Dennis A Torchia1.   

Abstract

Although biomolecular dynamics has been investigated using NMR for at least 40 years, only in the past 20 years have internal motions been characterized at atomic resolution throughout proteins and nucleic acids. This development was made possible by multidimensional heteronuclear NMR approaches that provide near complete sequential signal assignments of uniformly labeled biomolecules. Recent methodological advances have enabled characterization of internal dynamics on timescales ranging from picoseconds to seconds, both in solution and in the solid state. The size, complexity and functional significance of biomolecules investigated by NMR continue to grow, as do the insights that have been obtained about function. In this article I review a number of recent advances that have made such studies possible, and provide a few examples of where NMR either by itself or in combination with other approaches has paved the way to a better understanding of the complex relationship between dynamics and biomolecular function. Finally, I discuss prospects for further advances in this field.
Copyright © 2011 Elsevier Inc. All rights reserved.

Mesh:

Substances:

Year:  2011        PMID: 21840740     DOI: 10.1016/j.jmr.2011.07.010

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  14 in total

Review 1.  NMR studies of dynamic biomolecular conformational ensembles.

Authors:  Dennis A Torchia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2014-11-28       Impact factor: 9.795

2.  Tyrosine residues mediate fibril formation in a dynamic light chain dimer interface.

Authors:  Ara Celi DiCostanzo; James R Thompson; Francis C Peterson; Brian F Volkman; Marina Ramirez-Alvarado
Journal:  J Biol Chem       Date:  2012-06-27       Impact factor: 5.157

3.  Conformational switch of the bacterial adhesin FimH in the absence of the regulatory domain: Engineering a minimalistic allosteric system.

Authors:  Said Rabbani; Brigitte Fiege; Deniz Eris; Marleen Silbermann; Roman Peter Jakob; Giulio Navarra; Timm Maier; Beat Ernst
Journal:  J Biol Chem       Date:  2017-11-27       Impact factor: 5.157

4.  A J-modulated protonless NMR experiment characterizes the conformational ensemble of the intrinsically disordered protein WIP.

Authors:  Eva Rozentur-Shkop; Gil Goobes; Jordan H Chill
Journal:  J Biomol NMR       Date:  2016-11-14       Impact factor: 2.835

5.  Tuning a timing device that regulates lateral root development in rice.

Authors:  Lucila Andrea Acevedo; Nathan E Korson; Justin M Williams; Linda K Nicholson
Journal:  J Biomol NMR       Date:  2019-08-12       Impact factor: 2.835

6.  Force-field dependence of chignolin folding and misfolding: comparison with experiment and redesign.

Authors:  Petra Kührová; Alfonso De Simone; Michal Otyepka; Robert B Best
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

7.  NMR determines transient structure and dynamics in the disordered C-terminal domain of WASp interacting protein.

Authors:  Noam Y Haba; Renana Gross; Jiri Novacek; Hadassa Shaked; Lukas Zidek; Mira Barda-Saad; Jordan H Chill
Journal:  Biophys J       Date:  2013-07-16       Impact factor: 4.033

8.  Direct Investigation of Slow Correlated Dynamics in Proteins via Dipolar Interactions.

Authors:  R Bryn Fenwick; Charles D Schwieters; Beat Vögeli
Journal:  J Am Chem Soc       Date:  2016-07-01       Impact factor: 15.419

9.  Analysis of local molecular motions of aromatic sidechains in proteins by 2D and 3D fast MAS NMR spectroscopy and quantum mechanical calculations.

Authors:  Piotr Paluch; Tomasz Pawlak; Agata Jeziorna; Julien Trébosc; Guangjin Hou; Alexander J Vega; Jean-Paul Amoureux; Martin Dracinsky; Tatyana Polenova; Marek J Potrzebowski
Journal:  Phys Chem Chem Phys       Date:  2015-11-21       Impact factor: 3.676

Review 10.  Methyl-Based NMR Spectroscopy Methods for Uncovering Structural Dynamics in Large Proteins and Protein Complexes.

Authors:  Zachary K Boswell; Michael P Latham
Journal:  Biochemistry       Date:  2018-10-26       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.