Literature DB >> 21840722

Synthesis and biological evaluation of 2',4'- and 3',4'-bridged nucleoside analogues.

K C Nicolaou1, Shelby P Ellery, Fatima Rivas, Karen Saye, Eric Rogers, Tyler J Workinger, Mark Schallenberger, Rommel Tawatao, Ana Montero, Ann Hessell, Floyd Romesberg, Dennis Carson, Dennis Burton.   

Abstract

Most nucleosides in solution typically exist in equilibrium between two major sugar pucker forms, N-type and S-type, but bridged nucleosides can be locked into one of these conformations depending on their specific structure. While many groups have researched these bridged nucleosides for the purpose of determining their binding affinity for antisense applications, we opted to look into the potential for biological activity within these conformationally-locked structures. A small library of 2',4'- and 3',4'-bridged nucleoside analogues was synthesized, including a novel 3',4'-carbocyclic bridged system. The synthesized compounds were tested for antibacterial, antitumor, and antiviral activities, leading to the identification of nucleosides possessing such biological activities. To the best of our knowledge, these biologically active compounds represent the first example of 2',4'-bridged nucleosides to demonstrate such properties. The most potent compound, nucleoside 33, exhibited significant antiviral activity against pseudoviruses SF162 (IC(50)=7.0 μM) and HxB2 (IC(50)=2.4 μM). These findings render bridged nucleosides as credible leads for drug discovery in the anti-HIV area of research.
Copyright © 2011. Published by Elsevier Ltd.

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Year:  2011        PMID: 21840722      PMCID: PMC3348725          DOI: 10.1016/j.bmc.2011.07.022

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  38 in total

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Journal:  J Org Chem       Date:  1997-10-17       Impact factor: 4.354

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Journal:  J Org Chem       Date:  2001-12-14       Impact factor: 4.354

3.  Synthesis of 2',4'-propylene-bridged (carba-ENA) thymidine and its analogues: the engineering of electrostatic and steric effects at the bottom of the minor groove for nuclease and thermodynamic stabilities and elicitation of RNase H.

Authors:  Yi Liu; Jianfeng Xu; Mansoureh Karimiahmadabadi; Chuanzheng Zhou; Jyoti Chattopadhyaya
Journal:  J Org Chem       Date:  2010-11-05       Impact factor: 4.354

4.  2'-O,4'-C-Methylene bridged nucleic acid (2',4'-BNA): synthesis and triplex-forming properties.

Authors:  S Obika; T Uneda; T Sugimoto; D Nanbu; T Minami; T Doi; T Imanishi
Journal:  Bioorg Med Chem       Date:  2001-04       Impact factor: 3.641

Review 5.  LNA: a versatile tool for therapeutics and genomics.

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Journal:  Trends Biotechnol       Date:  2003-02       Impact factor: 19.536

6.  Selective modulation of DNA polymerase activity by fixed-conformation nucleoside analogues.

Authors:  Robert L Eoff; Colleen E McGrath; Leena Maddukuri; S Giovanna Salamanca-Pinzón; Victor E Marquez; Lawrence J Marnett; F Peter Guengerich; Martin Egli
Journal:  Angew Chem Int Ed Engl       Date:  2010-10-04       Impact factor: 15.336

7.  Inhibition of Rous sarcoma virus replication and cell transformation by a specific oligodeoxynucleotide.

Authors:  P C Zamecnik; M L Stephenson
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

8.  Synthesis of 2',3'-dideoxy-2',3'-alpha-methanocytidine.

Authors:  A R Beard; P I Butler; J Mann; N K Partlett
Journal:  Carbohydr Res       Date:  1990-09-19       Impact factor: 2.104

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Authors:  Aaron R Thornton; Véronique I Martin; Simon B Blakey
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10.  A chemical synthesis of LNA-2,6-diaminopurine riboside, and the influence of 2'-O-methyl-2,6-diaminopurine and LNA-2,6-diaminopurine ribosides on the thermodynamic properties of 2'-O-methyl RNA/RNA heteroduplexes.

Authors:  Anna Pasternak; Elzbieta Kierzek; Karol Pasternak; Douglas H Turner; Ryszard Kierzek
Journal:  Nucleic Acids Res       Date:  2007-06-12       Impact factor: 16.971

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  4 in total

1.  Synthesis and biological evaluation of a series of thieno-expanded tricyclic purine 2'-deoxy nucleoside analogues.

Authors:  Orrette R Wauchope; Cameron Johnson; Pasupathy Krishnamoorthy; Graciela Andrei; Robert Snoeck; Jan Balzarini; Katherine L Seley-Radtke
Journal:  Bioorg Med Chem       Date:  2012-03-12       Impact factor: 3.641

2.  Synthesis of Sugar and Nucleoside Analogs and Evaluation of Their Anticancer and Analgesic Potentials.

Authors:  Fahad Hussain; Fahad Imtiaz Rahman; Poushali Saha; Atsushi Mikami; Takashi Osawa; Satoshi Obika; S M Abdur Rahman
Journal:  Molecules       Date:  2022-05-29       Impact factor: 4.927

3.  Novel metabolites from Bacillus safensis and their antifungal property against Alternaria alternata.

Authors:  Jai Prakash; Naveen Kumar Arora
Journal:  Antonie Van Leeuwenhoek       Date:  2021-06-02       Impact factor: 2.271

Review 4.  Recent Advances in the Chemical Synthesis and Evaluation of Anticancer Nucleoside Analogues.

Authors:  Mieke Guinan; Caecilie Benckendorff; Mark Smith; Gavin J Miller
Journal:  Molecules       Date:  2020-04-28       Impact factor: 4.411

  4 in total

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