Literature DB >> 21838692

Improving the stability of aptamers by chemical modification.

R E Wang1, H Wu, Y Niu, J Cai.   

Abstract

Ever since the invention of SELEX (systematic evolution of ligands by exponential enrichment), there has been rapid development for aptamers over the last two decades, making them a promising approach in therapeutic applications as either drug candidates or diagnostic tools. For therapeutic purposes, a durable performance of aptamers in biofluids is required, which is, however, hampered by the lack of stability of most aptamers. Not only are the nucleic acid aptamers susceptible to nucleases, the peptide aptamers are also subjective to degradation by proteases. With the advancement of chemical biology, numerous attempts have been made to overcome this obstacle, many resulting in significant improvements in stability. In this review, chemical modifications to increase the stability of three main types of aptamers, DNA, RNA and peptide are comprehensively summarized. For nucleic acid aptamers, development of modified SELEX coupled with mutated polymerase is discussed, which is adaptive to a number of modifications in aptamers and in a large extent facilitates the research of aptamer-modifications. For peptide aptamers, approaches in molecular biology with introduction of stabilizing protein as well as the switch of scaffold protein are included, which may represent a future direction of chemical conjugations to aptamers.

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Year:  2011        PMID: 21838692     DOI: 10.2174/092986711797189565

Source DB:  PubMed          Journal:  Curr Med Chem        ISSN: 0929-8673            Impact factor:   4.530


  36 in total

Review 1.  Recent advances in understanding oligonucleotide aptamers and their applications as therapeutic agents.

Authors:  Khaled S Allemailem; Ahmad Almatroudi; Mohammed A Alsahli; Ghaiyda Talal Basfar; Faris Alrumaihi; Arshad Husain Rahmani; Amjad Ali Khan
Journal:  3 Biotech       Date:  2020-11-24       Impact factor: 2.406

2.  Mapping the affinity landscape of Thrombin-binding aptamers on 2΄F-ANA/DNA chimeric G-Quadruplex microarrays.

Authors:  Jory Lietard; Hala Abou Assi; Irene Gómez-Pinto; Carlos González; Mark M Somoza; Masad J Damha
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

3.  Influence of 5-N-carboxamide modifications on the thermodynamic stability of oligonucleotides.

Authors:  Steven K Wolk; Richard K Shoemaker; Wes S Mayfield; Andrew L Mestdagh; Nebojsa Janjic
Journal:  Nucleic Acids Res       Date:  2015-10-04       Impact factor: 16.971

4.  DNA display of folded RNA libraries enabling RNA-SELEX without reverse transcription.

Authors:  I S MacPherson; J S Temme; I J Krauss
Journal:  Chem Commun (Camb)       Date:  2017-03-02       Impact factor: 6.222

5.  Inhibition of Human Urokinase-Type Plasminogen Activator (uPA) Enzyme Activity and Receptor Binding by DNA Aptamers as Potential Therapeutics through Binding to the Different Forms of uPA.

Authors:  Nico Dreymann; Julia Wuensche; Wiebke Sabrowski; Anja Moeller; Denise Czepluch; Dana Vu Van; Susanne Fuessel; Marcus M Menger
Journal:  Int J Mol Sci       Date:  2022-04-28       Impact factor: 6.208

6.  An L-RNA Aptamer that Binds and Inhibits RNase.

Authors:  Charles Olea; Joachim Weidmann; Philip E Dawson; Gerald F Joyce
Journal:  Chem Biol       Date:  2015-11-19

Review 7.  Translational Applications of Hydrogels.

Authors:  Santiago Correa; Abigail K Grosskopf; Hector Lopez Hernandez; Doreen Chan; Anthony C Yu; Lyndsay M Stapleton; Eric A Appel
Journal:  Chem Rev       Date:  2021-05-03       Impact factor: 60.622

8.  Nuclease Hydrolysis Does Not Drive the Rapid Signaling Decay of DNA Aptamer-Based Electrochemical Sensors in Biological Fluids.

Authors:  Alexander Shaver; Nandini Kundu; Brian E Young; Philip A Vieira; Jonathan T Sczepanski; Netzahualcóyotl Arroyo-Currás
Journal:  Langmuir       Date:  2021-04-20       Impact factor: 3.882

9.  Application of aptamers in diagnostics, drug-delivery and imaging.

Authors:  Chetan Chandola; Sheetal Kalme; Marco G Casteleijn; Arto Urtti; Muniasamy Neerathilingam
Journal:  J Biosci       Date:  2016-09       Impact factor: 2.795

10.  In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serum.

Authors:  Ka L Hong; Luisa Battistella; Alysia D Salva; Ryan M Williams; Letha J Sooter
Journal:  Int J Mol Sci       Date:  2015-01-27       Impact factor: 5.923

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