Literature DB >> 21837768

Disrupted post-transcriptional regulation of the cystic fibrosis transmembrane conductance regulator (CFTR) by a 5'UTR mutation is associated with a CFTR-related disease.

Samuel W Lukowski1, Cristina Bombieri, Ann E O Trezise.   

Abstract

Cystic fibrosis (CF) is characterized as a single-gene disorder with a simple, autosomal recessive mode of inheritance. However, translation of cystic fibrosis transmembrane conductance regulator (CFTR) genotype into CF phenotype is influenced by nucleotide sequence variations at multiple genetic loci, and individuals heterozygous for CFTR mutations are predisposed to a range of CFTR-related conditions, such as disseminated bronchiectasis. CF disease severity and CFTR-related conditions are more akin to complex, multifactorial traits, which are increasingly being associated with mutations that perturb gene expression. We have identified a patient with disseminated bronchiectasis, who is heterozygous for a single-nucleotide substitution in the CFTR 5' untranslated region (UTR) (c.-34C>T). The c.-34C>T mutation creates an upstream AUG codon and upstream open reading frame that overlaps, and is out of frame with, the CFTR protein coding sequence. Using luciferase reporter constructs, we have shown that the c.-34C>T mutation decreases gene expression by 85-99%, by reducing translation efficiency and mRNA stability. This is the first CFTR regulatory mutation shown to act at a posttranscriptional level that reduces the synthesis of normal CFTR (Class V), and reaffirms the importance of regulatory mutations as a genetic basis of multifactorial phenotypes.
© 2011 Wiley-Liss, Inc.

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Year:  2011        PMID: 21837768     DOI: 10.1002/humu.21545

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  10 in total

1.  Two common human CLDN5 alleles encode different open reading frames but produce one protein isoform.

Authors:  Ronald M Cornely; Barbara Schlingmann; Whitney S Shepherd; Joshua D Chandler; David C Neujahr; Michael Koval
Journal:  Ann N Y Acad Sci       Date:  2017-04-26       Impact factor: 5.691

2.  Comparison of GENCODE and RefSeq gene annotation and the impact of reference geneset on variant effect prediction.

Authors:  Adam Frankish; Barbara Uszczynska; Graham R S Ritchie; Jose M Gonzalez; Dmitri Pervouchine; Robert Petryszak; Jonathan M Mudge; Nuno Fonseca; Alvis Brazma; Roderic Guigo; Jennifer Harrow
Journal:  BMC Genomics       Date:  2015-06-18       Impact factor: 3.969

3.  Consequences of germline variation disrupting the constitutional translational initiation codon start sites of MLH1 and BRCA2: Use of potential alternative start sites and implications for predicting variant pathogenicity.

Authors:  Michael T Parsons; Phillip J Whiley; Jonathan Beesley; Mark Drost; Niels de Wind; Bryony A Thompson; Louise Marquart; John L Hopper; Mark A Jenkins; Melissa A Brown; Kathy Tucker; Linda Warwick; Daniel D Buchanan; Amanda B Spurdle
Journal:  Mol Carcinog       Date:  2013-12-02       Impact factor: 4.784

Review 4.  Gene expression regulation by upstream open reading frames and human disease.

Authors:  Cristina Barbosa; Isabel Peixeiro; Luísa Romão
Journal:  PLoS Genet       Date:  2013-08-08       Impact factor: 5.917

5.  Dopa-responsive dystonia: functional analysis of single nucleotide substitutions within the 5' untranslated GCH1 region.

Authors:  Ioanna A Armata; Leonora Balaj; John K Kuster; Xuan Zhang; Shelun Tsai; Andreas A Armatas; Trisha J Multhaupt-Buell; Roy Soberman; Xandra O Breakefield; Hiroshi Ichinose; Nutan Sharma
Journal:  PLoS One       Date:  2013-10-04       Impact factor: 3.240

Review 6.  Common and Rare 5'UTR Variants Altering Upstream Open Reading Frames in Cardiovascular Genomics.

Authors:  Omar Soukarieh; Caroline Meguerditchian; Carole Proust; Dylan Aïssi; Mélanie Eyries; Aurélie Goyenvalle; David-Alexandre Trégouët
Journal:  Front Cardiovasc Med       Date:  2022-03-21

7.  Next-generation sequencing for identifying genetic mutations in adults with bronchiectasis.

Authors:  Wei-Jie Guan; Jia-Cheng Li; Fang Liu; Jian Zhou; Ya-Ping Liu; Chao Ling; Yong-Hua Gao; Hui-Min Li; Jing-Jing Yuan; Yan Huang; Chun-Lan Chen; Rong-Chang Chen; Xue Zhang; Nan-Shan Zhong
Journal:  J Thorac Dis       Date:  2018-05       Impact factor: 2.895

8.  uORFdb--a comprehensive literature database on eukaryotic uORF biology.

Authors:  Klaus Wethmar; Adriano Barbosa-Silva; Miguel A Andrade-Navarro; Achim Leutz
Journal:  Nucleic Acids Res       Date:  2013-10-24       Impact factor: 16.971

9.  Analysis of long-range interactions in primary human cells identifies cooperative CFTR regulatory elements.

Authors:  Stéphanie Moisan; Soizik Berlivet; Chandran Ka; Gérald Le Gac; Josée Dostie; Claude Férec
Journal:  Nucleic Acids Res       Date:  2015-11-28       Impact factor: 16.971

10.  CFTR Cooperative Cis-Regulatory Elements in Intestinal Cells.

Authors:  Mégane Collobert; Ozvan Bocher; Anaïs Le Nabec; Emmanuelle Génin; Claude Férec; Stéphanie Moisan
Journal:  Int J Mol Sci       Date:  2021-03-05       Impact factor: 5.923

  10 in total

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