| Literature DB >> 21837178 |
Alessandra C Pinheiro, Marcus V N de Souza, Edward R T Tiekink, Solange M S V Wardell, James L Wardell.
Abstract
The mol-ecule of the title compound, C(16)H(23)N(3)O(5), is twisted about the chiral C atom, the dihedral angle formed between the amide residues being 79.6 (3)°. The conformation about the imine bond [1.278 (5) Å] is E. In the crystal, O-H⋯O and N-H⋯O hydrogen bonding between the hy-droxy, amine and carbonyl groups leads to the formation of supra-molecular layers, which stack along the c-axis direction.Entities:
Year: 2011 PMID: 21837178 PMCID: PMC3151906 DOI: 10.1107/S1600536811024263
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H23N3O5 | |
| Triclinic, | |
| Hall symbol: P 1 | Mo |
| Cell parameters from 14323 reflections | |
| θ = 2.9–27.5° | |
| µ = 0.10 mm−1 | |
| α = 79.919 (4)° | |
| β = 83.686 (4)° | Block, colourless |
| γ = 76.505 (4)° | 0.16 × 0.07 × 0.04 mm |
| Bruker–Nonius Roper CCD camera on κ-goniostat diffractometer | 1900 independent reflections |
| Radiation source: Bruker-Nonius FR591 rotating anode | 1661 reflections with |
| graphite | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.5°, θmin = 3.7° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 7495 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1900 reflections | (Δ/σ)max < 0.001 |
| 230 parameters | Δρmax = 0.24 e Å−3 |
| 6 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.6917 (5) | 0.8513 (5) | 0.7563 (2) | 0.0280 (7) | |
| O2 | 0.9933 (5) | 0.3081 (5) | 0.3426 (2) | 0.0259 (6) | |
| O3 | 0.4988 (5) | 0.1450 (5) | 0.3533 (2) | 0.0244 (6) | |
| H3O | 0.340 (3) | 0.190 (9) | 0.369 (3) | 0.037* | |
| O4 | 0.4967 (5) | 0.9626 (5) | 0.06608 (19) | 0.0228 (6) | |
| O5 | 0.2010 (5) | 0.7831 (5) | 0.1623 (2) | 0.0250 (6) | |
| N1 | 1.0286 (6) | 0.6618 (6) | 0.4406 (2) | 0.0215 (7) | |
| N2 | 0.8274 (6) | 0.6827 (6) | 0.3836 (2) | 0.0209 (7) | |
| H2N | 0.709 (6) | 0.818 (5) | 0.373 (3) | 0.025* | |
| N3 | 0.6282 (6) | 0.6919 (6) | 0.1906 (2) | 0.0212 (7) | |
| H3N | 0.777 (5) | 0.731 (8) | 0.171 (3) | 0.025* | |
| C1 | 1.2010 (7) | 0.8412 (7) | 0.5502 (3) | 0.0194 (8) | |
| C2 | 1.4019 (7) | 0.6394 (7) | 0.5725 (3) | 0.0211 (8) | |
| H2 | 1.4244 | 0.5028 | 0.5406 | 0.025* | |
| C3 | 1.5699 (7) | 0.6361 (7) | 0.6412 (3) | 0.0222 (8) | |
| H3 | 1.7053 | 0.4975 | 0.6560 | 0.027* | |
| C4 | 1.5392 (7) | 0.8349 (7) | 0.6876 (3) | 0.0229 (8) | |
| C5 | 1.3430 (8) | 1.0405 (7) | 0.6634 (3) | 0.0256 (9) | |
| H5 | 1.3242 | 1.1793 | 0.6937 | 0.031* | |
| C6 | 1.1777 (8) | 1.0429 (7) | 0.5961 (3) | 0.0251 (9) | |
| H6 | 1.0453 | 1.1836 | 0.5805 | 0.030* | |
| C7 | 1.8959 (8) | 0.6473 (8) | 0.7822 (3) | 0.0280 (9) | |
| H7A | 1.8249 | 0.5017 | 0.8027 | 0.042* | |
| H7B | 1.9827 | 0.6773 | 0.8343 | 0.042* | |
| H7C | 2.0207 | 0.6225 | 0.7274 | 0.042* | |
| C8 | 1.0108 (8) | 0.8446 (7) | 0.4829 (3) | 0.0229 (8) | |
| H8 | 0.8738 | 0.9833 | 0.4709 | 0.027* | |
| C9 | 0.8245 (7) | 0.4972 (7) | 0.3388 (3) | 0.0195 (7) | |
| C10 | 0.5925 (7) | 0.5327 (7) | 0.2797 (3) | 0.0188 (7) | |
| H10 | 0.4336 | 0.6117 | 0.3161 | 0.023* | |
| C11 | 0.5605 (7) | 0.2847 (7) | 0.2643 (3) | 0.0226 (8) | |
| H11A | 0.4206 | 0.3063 | 0.2214 | 0.027* | |
| H11B | 0.7227 | 0.1972 | 0.2339 | 0.027* | |
| C12 | 0.4209 (7) | 0.8111 (7) | 0.1416 (3) | 0.0188 (7) | |
| C13 | 0.3072 (7) | 1.1111 (7) | −0.0009 (3) | 0.0213 (8) | |
| C14 | 0.4761 (8) | 1.2529 (7) | −0.0707 (3) | 0.0264 (9) | |
| H14A | 0.5607 | 1.3426 | −0.0360 | 0.040* | |
| H14B | 0.3684 | 1.3678 | −0.1172 | 0.040* | |
| H14C | 0.6079 | 1.1395 | −0.1037 | 0.040* | |
| C15 | 0.0964 (8) | 1.2826 (7) | 0.0503 (3) | 0.0250 (8) | |
| H15A | −0.0152 | 1.1886 | 0.0920 | 0.038* | |
| H15B | −0.0070 | 1.4008 | 0.0034 | 0.038* | |
| H15C | 0.1759 | 1.3688 | 0.0882 | 0.038* | |
| C16 | 0.1993 (8) | 0.9468 (7) | −0.0514 (3) | 0.0244 (8) | |
| H16A | 0.3423 | 0.8281 | −0.0770 | 0.037* | |
| H16B | 0.0995 | 1.0457 | −0.1036 | 0.037* | |
| H16C | 0.0868 | 0.8610 | −0.0063 | 0.037* |
| O1 | 0.0280 (15) | 0.0329 (16) | 0.0243 (15) | −0.0048 (13) | −0.0056 (12) | −0.0074 (12) |
| O2 | 0.0193 (14) | 0.0193 (13) | 0.0391 (17) | −0.0037 (11) | −0.0067 (12) | −0.0026 (12) |
| O3 | 0.0160 (13) | 0.0238 (14) | 0.0286 (15) | −0.0031 (11) | −0.0011 (11) | 0.0066 (11) |
| O4 | 0.0181 (13) | 0.0237 (14) | 0.0246 (14) | −0.0042 (11) | −0.0059 (11) | 0.0041 (11) |
| O5 | 0.0229 (15) | 0.0279 (15) | 0.0241 (15) | −0.0076 (12) | −0.0041 (11) | 0.0006 (12) |
| N1 | 0.0212 (16) | 0.0245 (16) | 0.0186 (16) | −0.0052 (13) | −0.0055 (12) | −0.0005 (13) |
| N2 | 0.0183 (16) | 0.0231 (17) | 0.0203 (17) | −0.0016 (13) | −0.0073 (13) | −0.0007 (13) |
| N3 | 0.0152 (15) | 0.0221 (17) | 0.0242 (17) | −0.0044 (12) | −0.0026 (13) | 0.0034 (13) |
| C1 | 0.0201 (18) | 0.0232 (19) | 0.0155 (18) | −0.0087 (15) | −0.0010 (14) | 0.0007 (14) |
| C2 | 0.0208 (19) | 0.0228 (19) | 0.0201 (19) | −0.0046 (16) | 0.0018 (15) | −0.0072 (15) |
| C3 | 0.0189 (19) | 0.026 (2) | 0.0206 (19) | −0.0025 (15) | −0.0029 (15) | −0.0012 (16) |
| C4 | 0.0205 (19) | 0.027 (2) | 0.022 (2) | −0.0094 (16) | 0.0011 (16) | 0.0001 (16) |
| C5 | 0.028 (2) | 0.0212 (19) | 0.027 (2) | −0.0024 (16) | −0.0023 (17) | −0.0058 (16) |
| C6 | 0.026 (2) | 0.0185 (18) | 0.029 (2) | 0.0007 (15) | −0.0069 (17) | −0.0021 (15) |
| C7 | 0.025 (2) | 0.035 (2) | 0.023 (2) | −0.0076 (18) | −0.0057 (16) | 0.0015 (17) |
| C8 | 0.0228 (19) | 0.0221 (19) | 0.022 (2) | −0.0055 (15) | −0.0005 (15) | 0.0016 (15) |
| C9 | 0.0176 (18) | 0.0182 (17) | 0.0209 (19) | −0.0059 (14) | 0.0027 (14) | 0.0020 (14) |
| C10 | 0.0157 (17) | 0.0221 (18) | 0.0180 (18) | −0.0044 (14) | −0.0016 (14) | −0.0008 (14) |
| C11 | 0.023 (2) | 0.0199 (19) | 0.025 (2) | −0.0073 (15) | −0.0042 (16) | 0.0023 (15) |
| C12 | 0.0202 (19) | 0.0202 (18) | 0.0161 (18) | −0.0072 (14) | −0.0012 (14) | 0.0001 (14) |
| C13 | 0.0178 (18) | 0.0227 (19) | 0.0209 (19) | −0.0029 (15) | −0.0051 (15) | 0.0042 (15) |
| C14 | 0.027 (2) | 0.022 (2) | 0.027 (2) | −0.0028 (16) | −0.0056 (17) | 0.0027 (16) |
| C15 | 0.027 (2) | 0.022 (2) | 0.024 (2) | −0.0027 (16) | −0.0046 (16) | −0.0024 (15) |
| C16 | 0.026 (2) | 0.0255 (19) | 0.022 (2) | −0.0068 (16) | −0.0025 (16) | −0.0036 (16) |
| O1—C4 | 1.372 (5) | C5—H5 | 0.9500 |
| O1—C7 | 1.425 (5) | C6—H6 | 0.9500 |
| O2—C9 | 1.233 (5) | C7—H7A | 0.9800 |
| O3—C11 | 1.431 (4) | C7—H7B | 0.9800 |
| O3—H3O | 0.841 (10) | C7—H7C | 0.9800 |
| O4—C12 | 1.350 (4) | C8—H8 | 0.9500 |
| O4—C13 | 1.480 (4) | C9—C10 | 1.530 (5) |
| O5—C12 | 1.218 (4) | C10—C11 | 1.524 (5) |
| N1—C8 | 1.278 (5) | C10—H10 | 1.0000 |
| N1—N2 | 1.389 (4) | C11—H11A | 0.9900 |
| N2—C9 | 1.336 (5) | C11—H11B | 0.9900 |
| N2—H2N | 0.880 (10) | C13—C15 | 1.523 (5) |
| N3—C12 | 1.353 (5) | C13—C16 | 1.523 (5) |
| N3—C10 | 1.455 (5) | C13—C14 | 1.526 (5) |
| N3—H3N | 0.880 (10) | C14—H14A | 0.9800 |
| C1—C2 | 1.397 (5) | C14—H14B | 0.9800 |
| C1—C6 | 1.401 (6) | C14—H14C | 0.9800 |
| C1—C8 | 1.469 (5) | C15—H15A | 0.9800 |
| C2—C3 | 1.397 (5) | C15—H15B | 0.9800 |
| C2—H2 | 0.9500 | C15—H15C | 0.9800 |
| C3—C4 | 1.385 (5) | C16—H16A | 0.9800 |
| C3—H3 | 0.9500 | C16—H16B | 0.9800 |
| C4—C5 | 1.400 (6) | C16—H16C | 0.9800 |
| C5—C6 | 1.372 (6) | ||
| C4—O1—C7 | 117.4 (3) | N3—C10—C11 | 112.2 (3) |
| C11—O3—H3O | 109 (3) | N3—C10—C9 | 109.8 (3) |
| C12—O4—C13 | 120.5 (3) | C11—C10—C9 | 109.1 (3) |
| C8—N1—N2 | 114.4 (3) | N3—C10—H10 | 108.6 |
| C9—N2—N1 | 118.8 (3) | C11—C10—H10 | 108.6 |
| C9—N2—H2N | 119 (3) | C9—C10—H10 | 108.6 |
| N1—N2—H2N | 122 (3) | O3—C11—C10 | 110.0 (3) |
| C12—N3—C10 | 119.8 (3) | O3—C11—H11A | 109.7 |
| C12—N3—H3N | 117 (3) | C10—C11—H11A | 109.7 |
| C10—N3—H3N | 122 (3) | O3—C11—H11B | 109.7 |
| C2—C1—C6 | 118.3 (4) | C10—C11—H11B | 109.7 |
| C2—C1—C8 | 122.2 (3) | H11A—C11—H11B | 108.2 |
| C6—C1—C8 | 119.5 (3) | O5—C12—N3 | 124.9 (3) |
| C1—C2—C3 | 120.8 (3) | O5—C12—O4 | 125.6 (3) |
| C1—C2—H2 | 119.6 | N3—C12—O4 | 109.5 (3) |
| C3—C2—H2 | 119.6 | O4—C13—C15 | 110.6 (3) |
| C4—C3—C2 | 120.0 (3) | O4—C13—C16 | 110.2 (3) |
| C4—C3—H3 | 120.0 | C15—C13—C16 | 112.6 (3) |
| C2—C3—H3 | 120.0 | O4—C13—C14 | 101.7 (3) |
| O1—C4—C3 | 125.0 (3) | C15—C13—C14 | 110.9 (3) |
| O1—C4—C5 | 115.6 (3) | C16—C13—C14 | 110.4 (3) |
| C3—C4—C5 | 119.4 (3) | C13—C14—H14A | 109.5 |
| C6—C5—C4 | 120.4 (4) | C13—C14—H14B | 109.5 |
| C6—C5—H5 | 119.8 | H14A—C14—H14B | 109.5 |
| C4—C5—H5 | 119.8 | C13—C14—H14C | 109.5 |
| C5—C6—C1 | 121.0 (4) | H14A—C14—H14C | 109.5 |
| C5—C6—H6 | 119.5 | H14B—C14—H14C | 109.5 |
| C1—C6—H6 | 119.5 | C13—C15—H15A | 109.5 |
| O1—C7—H7A | 109.5 | C13—C15—H15B | 109.5 |
| O1—C7—H7B | 109.5 | H15A—C15—H15B | 109.5 |
| H7A—C7—H7B | 109.5 | C13—C15—H15C | 109.5 |
| O1—C7—H7C | 109.5 | H15A—C15—H15C | 109.5 |
| H7A—C7—H7C | 109.5 | H15B—C15—H15C | 109.5 |
| H7B—C7—H7C | 109.5 | C13—C16—H16A | 109.5 |
| N1—C8—C1 | 120.4 (3) | C13—C16—H16B | 109.5 |
| N1—C8—H8 | 119.8 | H16A—C16—H16B | 109.5 |
| C1—C8—H8 | 119.8 | C13—C16—H16C | 109.5 |
| O2—C9—N2 | 124.3 (4) | H16A—C16—H16C | 109.5 |
| O2—C9—C10 | 120.3 (3) | H16B—C16—H16C | 109.5 |
| N2—C9—C10 | 115.4 (3) | ||
| C8—N1—N2—C9 | −177.8 (3) | N1—N2—C9—C10 | 178.5 (3) |
| C6—C1—C2—C3 | 2.0 (6) | C12—N3—C10—C11 | 79.8 (4) |
| C8—C1—C2—C3 | −176.0 (4) | C12—N3—C10—C9 | −158.7 (3) |
| C1—C2—C3—C4 | −0.3 (6) | O2—C9—C10—N3 | −102.2 (4) |
| C7—O1—C4—C3 | −0.5 (5) | N2—C9—C10—N3 | 77.5 (4) |
| C7—O1—C4—C5 | −179.2 (4) | O2—C9—C10—C11 | 21.1 (5) |
| C2—C3—C4—O1 | 179.7 (4) | N2—C9—C10—C11 | −159.2 (3) |
| C2—C3—C4—C5 | −1.6 (6) | N3—C10—C11—O3 | −173.9 (3) |
| O1—C4—C5—C6 | −179.4 (4) | C9—C10—C11—O3 | 64.3 (4) |
| C3—C4—C5—C6 | 1.8 (6) | C10—N3—C12—O5 | −5.9 (6) |
| C4—C5—C6—C1 | −0.1 (6) | C10—N3—C12—O4 | 174.9 (3) |
| C2—C1—C6—C5 | −1.8 (6) | C13—O4—C12—O5 | −0.7 (5) |
| C8—C1—C6—C5 | 176.2 (4) | C13—O4—C12—N3 | 178.6 (3) |
| N2—N1—C8—C1 | 176.1 (3) | C12—O4—C13—C15 | 60.9 (4) |
| C2—C1—C8—N1 | −1.8 (5) | C12—O4—C13—C16 | −64.3 (4) |
| C6—C1—C8—N1 | −179.8 (4) | C12—O4—C13—C14 | 178.7 (3) |
| N1—N2—C9—O2 | −1.9 (5) |
| H··· | ||||
| O3—H3o···O2i | 0.84 (3) | 1.87 (3) | 2.651 (4) | 153 (4) |
| N2—H2n···O3ii | 0.88 (3) | 1.93 (3) | 2.803 (4) | 169 (3) |
| N3—H3n···O5iii | 0.88 (3) | 2.34 (3) | 3.188 (4) | 164 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3o⋯O2i | 0.84 (3) | 1.87 (3) | 2.651 (4) | 153 (4) |
| N2—H2n⋯O3ii | 0.88 (3) | 1.93 (3) | 2.803 (4) | 169 (3) |
| N3—H3n⋯O5iii | 0.88 (3) | 2.34 (3) | 3.188 (4) | 164 (4) |
Symmetry codes: (i) ; (ii) ; (iii) .