Literature DB >> 21837148

(E)-1-(4-Amino-phen-yl)-3-(pyridin-3-yl)prop-2-en-1-one.

Suchada Chantrapromma, Thawanrat Kobkeatthawin, Kullapa Chanawanno, Pitikan Wisitsak, Hoong-Kun Fun.   

Abstract

The title chalcone derivative, C(14)H(12)N(2)O, consists of 4-amino-phenyl and pyridine rings bridged by a prop-2-en-1-one unit and exists in a trans configuration with respect to the C=C double bond. The mol-ecule is slightly twisted with a dihedral angle of 29.38 (7)° between the benzene and pyridine rings. The prop-2-en-1-one bridge is nearly planar with an r.m.s. deviation of 0.0384 (1) Å and makes dihedral angles of 15.40 (9) and 16.30 (9)°, respectively, with the benzene and pyridine rings. In the crystal, mol-ecules are linked by N-H⋯N and N-H⋯O hydrogen bonds into a layer parallel to the ab plane. A π-π inter-action with a centroid-centroid distance of 3.6946 (10) Å is also observed.

Entities:  

Year:  2011        PMID: 21837148      PMCID: PMC3152058          DOI: 10.1107/S1600536811023634

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For a related structure, see: Horkaew et al. (2010 ▶). For background to and applications of chalcones, see: Gaber et al. (2008 ▶); Ávila et al. (2008 ▶); Mei et al. (2001 ▶); Ohad et al. (2004 ▶); Patil et al. (2007 ▶); Svetlichny et al. (2007 ▶); Tewtrakul et al. (2003 ▶); Wu et al. (2006 ▶); Xu et al. (2005 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C14H12N2O M = 224.26 Orthorhombic, a = 12.0046 (12) Å b = 7.9329 (9) Å c = 22.925 (3) Å V = 2183.2 (4) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.52 × 0.32 × 0.18 mm

Data collection

Bruker APEX DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.956, T max = 0.985 12726 measured reflections 3177 independent reflections 2433 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.132 S = 1.03 3177 reflections 202 parameters All H-atom parameters refined Δρmax = 0.37 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811023634/is2731sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023634/is2731Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811023634/is2731Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N2ODx = 1.365 Mg m3
Mr = 224.26Melting point = 453–454 K
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3177 reflections
a = 12.0046 (12) Åθ = 2.5–30.0°
b = 7.9329 (9) ŵ = 0.09 mm1
c = 22.925 (3) ÅT = 100 K
V = 2183.2 (4) Å3Block, yellow
Z = 80.52 × 0.32 × 0.18 mm
F(000) = 944
Bruker APEX DUO CCD area-detector diffractometer3177 independent reflections
Radiation source: sealed tube2433 reflections with I > 2σ(I)
graphiteRint = 0.043
φ and ω scansθmax = 30.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −16→14
Tmin = 0.956, Tmax = 0.985k = −11→10
12726 measured reflectionsl = −32→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.132All H-atom parameters refined
S = 1.03w = 1/[σ2(Fo2) + (0.0702P)2 + 0.5761P] where P = (Fo2 + 2Fc2)/3
3177 reflections(Δ/σ)max = 0.001
202 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.18 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.87481 (8)−0.00829 (13)0.62116 (4)0.0274 (2)
N10.88749 (10)−0.40307 (16)0.86417 (5)0.0262 (3)
H1N10.9537 (17)−0.447 (3)0.8695 (9)0.037 (5)*
H2N10.8278 (17)−0.431 (3)0.8878 (9)0.043 (5)*
N20.34284 (10)0.06758 (18)0.57106 (5)0.0317 (3)
C10.82037 (9)−0.14511 (16)0.70829 (6)0.0195 (3)
C20.92774 (10)−0.20798 (16)0.72041 (6)0.0210 (3)
H2A0.9864 (14)−0.193 (2)0.6922 (7)0.023 (4)*
C30.95058 (10)−0.29288 (16)0.77139 (6)0.0214 (3)
H3A1.0254 (14)−0.340 (2)0.7786 (7)0.029 (4)*
C40.86642 (10)−0.31820 (17)0.81357 (6)0.0208 (3)
C50.75956 (10)−0.25227 (18)0.80220 (6)0.0234 (3)
H5A0.7024 (17)−0.265 (3)0.8321 (9)0.045 (5)*
C60.73797 (10)−0.16943 (17)0.75074 (6)0.0214 (3)
H6A0.6624 (14)−0.121 (2)0.7442 (7)0.025 (4)*
C70.79831 (10)−0.05897 (16)0.65285 (6)0.0205 (3)
C80.68037 (10)−0.03488 (18)0.63425 (6)0.0226 (3)
H8A0.6213 (16)−0.097 (3)0.6564 (9)0.042 (5)*
C90.65435 (10)0.06655 (17)0.58997 (6)0.0232 (3)
H9A0.7163 (14)0.126 (2)0.5705 (7)0.031 (4)*
C100.54235 (10)0.10884 (17)0.56899 (6)0.0219 (3)
C110.52786 (11)0.2397 (2)0.52922 (6)0.0284 (3)
H11A0.5968 (15)0.303 (2)0.5147 (8)0.030 (4)*
C120.42183 (12)0.2841 (2)0.51084 (7)0.0313 (3)
H12A0.4105 (16)0.374 (3)0.4827 (9)0.040 (5)*
C130.33284 (12)0.1966 (2)0.53375 (7)0.0313 (3)
H13A0.2553 (16)0.229 (2)0.5245 (8)0.041 (5)*
C140.44619 (11)0.0255 (2)0.58784 (6)0.0267 (3)
H14A0.4500 (15)−0.070 (3)0.6168 (8)0.034 (5)*
U11U22U33U12U13U23
O10.0178 (4)0.0354 (6)0.0292 (5)−0.0004 (4)0.0009 (4)0.0037 (4)
N10.0177 (5)0.0342 (7)0.0267 (6)0.0028 (4)−0.0018 (4)0.0020 (5)
N20.0186 (5)0.0466 (8)0.0299 (6)−0.0020 (5)−0.0015 (5)0.0051 (5)
C10.0148 (5)0.0193 (6)0.0245 (6)0.0002 (4)−0.0024 (4)−0.0034 (5)
C20.0143 (5)0.0216 (6)0.0271 (6)−0.0001 (4)0.0004 (5)−0.0027 (5)
C30.0135 (5)0.0219 (6)0.0286 (7)0.0010 (4)−0.0020 (4)−0.0031 (5)
C40.0169 (5)0.0219 (6)0.0237 (6)0.0004 (4)−0.0026 (4)−0.0043 (5)
C50.0156 (5)0.0296 (7)0.0248 (6)0.0029 (5)0.0011 (5)−0.0027 (5)
C60.0142 (5)0.0243 (6)0.0255 (6)0.0023 (4)−0.0015 (4)−0.0051 (5)
C70.0158 (5)0.0210 (6)0.0246 (6)0.0004 (4)−0.0013 (4)−0.0038 (5)
C80.0159 (5)0.0263 (7)0.0257 (6)−0.0015 (5)−0.0013 (5)−0.0001 (5)
C90.0162 (5)0.0267 (7)0.0267 (6)0.0002 (5)0.0014 (5)−0.0009 (5)
C100.0186 (6)0.0265 (7)0.0205 (6)0.0019 (4)−0.0003 (4)−0.0019 (5)
C110.0214 (6)0.0339 (8)0.0298 (7)0.0001 (5)0.0019 (5)0.0049 (6)
C120.0264 (7)0.0358 (8)0.0316 (7)0.0036 (5)−0.0038 (6)0.0071 (6)
C130.0210 (6)0.0440 (9)0.0290 (7)0.0039 (6)−0.0043 (5)0.0027 (6)
C140.0190 (6)0.0348 (8)0.0262 (7)−0.0019 (5)−0.0015 (5)0.0039 (6)
O1—C71.2381 (16)C5—H5A0.97 (2)
N1—C41.3649 (18)C6—H6A0.996 (17)
N1—H1N10.88 (2)C7—C81.4909 (17)
N1—H2N10.93 (2)C8—C91.332 (2)
N2—C131.339 (2)C8—H8A1.00 (2)
N2—C141.3410 (17)C9—C101.4668 (17)
C1—C61.4011 (18)C9—H9A0.986 (18)
C1—C21.4097 (16)C10—C111.392 (2)
C1—C71.4671 (18)C10—C141.3986 (19)
C2—C31.3767 (19)C11—C121.3864 (19)
C2—H2A0.963 (16)C11—H11A1.023 (18)
C3—C41.4127 (18)C12—C131.378 (2)
C3—H3A0.988 (17)C12—H12A0.97 (2)
C4—C51.4097 (17)C13—H13A0.99 (2)
C5—C61.3749 (19)C14—H14A1.01 (2)
C4—N1—H1N1118.9 (13)O1—C7—C8119.67 (12)
C4—N1—H2N1118.2 (12)C1—C7—C8118.61 (11)
H1N1—N1—H2N1121.7 (19)C9—C8—C7121.19 (12)
C13—N2—C14117.14 (13)C9—C8—H8A121.1 (11)
C6—C1—C2117.38 (12)C7—C8—H8A117.8 (11)
C6—C1—C7122.58 (11)C8—C9—C10127.07 (12)
C2—C1—C7120.04 (11)C8—C9—H9A117.1 (10)
C3—C2—C1121.50 (12)C10—C9—H9A115.8 (10)
C3—C2—H2A119.0 (10)C11—C10—C14116.83 (12)
C1—C2—H2A119.5 (10)C11—C10—C9119.98 (12)
C2—C3—C4120.55 (11)C14—C10—C9123.18 (12)
C2—C3—H3A120.7 (10)C12—C11—C10120.21 (13)
C4—C3—H3A118.8 (10)C12—C11—H11A121.3 (10)
N1—C4—C5120.58 (12)C10—C11—H11A118.5 (10)
N1—C4—C3121.28 (11)C13—C12—C11117.90 (14)
C5—C4—C3118.13 (12)C13—C12—H12A121.0 (12)
C6—C5—C4120.50 (12)C11—C12—H12A121.1 (12)
C6—C5—H5A121.3 (12)N2—C13—C12123.98 (13)
C4—C5—H5A118.2 (12)N2—C13—H13A115.0 (11)
C5—C6—C1121.92 (11)C12—C13—H13A121.0 (11)
C5—C6—H6A119.0 (10)N2—C14—C10123.89 (14)
C1—C6—H6A119.0 (10)N2—C14—H14A114.7 (10)
O1—C7—C1121.71 (11)C10—C14—H14A121.4 (10)
C6—C1—C2—C31.23 (18)O1—C7—C8—C9−12.5 (2)
C7—C1—C2—C3−178.45 (12)C1—C7—C8—C9168.37 (12)
C1—C2—C3—C4−0.56 (19)C7—C8—C9—C10−176.57 (13)
C2—C3—C4—N1179.56 (12)C8—C9—C10—C11168.40 (14)
C2—C3—C4—C5−0.85 (19)C8—C9—C10—C14−10.3 (2)
N1—C4—C5—C6−178.84 (13)C14—C10—C11—C121.1 (2)
C3—C4—C5—C61.57 (19)C9—C10—C11—C12−177.71 (14)
C4—C5—C6—C1−0.9 (2)C10—C11—C12—C130.9 (2)
C2—C1—C6—C5−0.50 (19)C14—N2—C13—C121.8 (2)
C7—C1—C6—C5179.18 (12)C11—C12—C13—N2−2.5 (2)
C6—C1—C7—O1165.18 (12)C13—N2—C14—C100.5 (2)
C2—C1—C7—O1−15.15 (19)C11—C10—C14—N2−1.9 (2)
C6—C1—C7—C8−15.74 (19)C9—C10—C14—N2176.92 (14)
C2—C1—C7—C8163.92 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O1i0.88 (2)2.13 (2)2.9920 (16)170 (2)
N1—H2N1···N2ii0.93 (2)2.26 (2)3.1471 (17)161.7 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O1i0.88 (2)2.13 (2)2.9920 (16)170 (2)
N1—H2N1⋯N2ii0.93 (2)2.26 (2)3.1471 (17)161.7 (19)

Symmetry codes: (i) ; (ii) .

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