Literature DB >> 21837144

3-Ethyl-5-(4-meth-oxy-phen-oxy)-2-(pyridin-4-yl)-3H-imidazo[4,5-b]pyridine.

S Ranjith, A Subbiahpandi, A D Suresh, K Pitchumani.   

Abstract

In the title compound, C(20)H(18)N(4)O(2), the imidazopyridine fused ring system is almost perpendicular to the benzene ring [dihedral angle = 87.6 (5)°]. The pyridine ring makes a dihedral angle of 35.5 (5)° with the mean plane of the imidazopyridine fragment. The crystal structure is stabilized by an aromatic π-π stacking inter-action between the phenyl rings of neighbouring mol-ecules [centroid-centroid distance = 3.772 (2) Å, inter-planar distance = 3.546 (2) Å and slippage = 1.286 (2) Å].

Entities:  

Year:  2011        PMID: 21837144      PMCID: PMC3152004          DOI: 10.1107/S1600536811023543

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyridine derivatives, see: Passannanti et al. (1998 ▶); Jiyeon et al. (2010 ▶); Abdel-Alim et al. (2005 ▶); Girgis et al. (2006 ▶); Slominska et al. (2008 ▶); Spanka et al. (2010 ▶). For a related structure, see: Ouzidan et al. (2010 ▶). For sp 3 hybridization, see: Beddoes et al. (1986 ▶).

Experimental

Crystal data

C20H18N4O2 M = 346.38 Monoclinic, a = 13.6591 (4) Å b = 13.7104 (4) Å c = 9.3177 (2) Å β = 98.940 (1)° V = 1723.74 (8) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.25 × 0.22 × 0.19 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.981, T max = 0.985 24827 measured reflections 5887 independent reflections 3938 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.140 S = 1.00 5887 reflections 237 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811023543/lx2189sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811023543/lx2189Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811023543/lx2189Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H18N4O2F(000) = 728
Mr = 346.38Dx = 1.335 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5887 reflections
a = 13.6591 (4) Åθ = 1.5–32.0°
b = 13.7104 (4) ŵ = 0.09 mm1
c = 9.3177 (2) ÅT = 293 K
β = 98.940 (1)°Block, white crystalline
V = 1723.74 (8) Å30.25 × 0.22 × 0.19 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer5887 independent reflections
Radiation source: fine-focus sealed tube3938 reflections with I > 2σ(I)
graphiteRint = 0.027
Detector resolution: 10.0 pixels mm-1θmax = 32.1°, θmin = 1.5°
ω and φ scansh = −20→20
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −20→20
Tmin = 0.981, Tmax = 0.985l = −13→12
24827 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: difference Fourier map
wR(F2) = 0.140H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.068P)2 + 0.2334P] where P = (Fo2 + 2Fc2)/3
5887 reflections(Δ/σ)max < 0.001
237 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.34424 (9)0.10472 (9)0.42615 (13)0.0383 (3)
C20.34457 (9)0.18018 (9)0.52777 (14)0.0406 (3)
H20.38500.23440.52400.049*
C30.28465 (9)0.17335 (9)0.63296 (13)0.0389 (3)
H30.28340.22220.70200.047*
C40.22585 (8)0.09028 (8)0.63192 (12)0.0335 (2)
C50.23419 (8)0.02078 (8)0.52553 (12)0.0330 (2)
C60.12671 (8)−0.02604 (8)0.66320 (12)0.0332 (2)
C70.16889 (10)−0.14643 (8)0.46766 (13)0.0403 (3)
H7A0.1356−0.19520.51820.048*
H7B0.2363−0.16830.46700.048*
C80.11655 (12)−0.13785 (11)0.31346 (15)0.0547 (4)
H8A0.0490−0.11860.31370.082*
H8B0.1181−0.19970.26550.082*
H8C0.1493−0.08970.26290.082*
C90.05197 (8)−0.08407 (8)0.72257 (12)0.0341 (2)
C100.05089 (10)−0.08248 (9)0.87147 (13)0.0427 (3)
H100.0986−0.04760.93290.051*
C11−0.02193 (11)−0.13343 (10)0.92665 (15)0.0500 (3)
H11−0.0225−0.13051.02620.060*
C12−0.08936 (10)−0.18810 (10)0.70402 (15)0.0459 (3)
H12−0.1370−0.22510.64570.055*
C13−0.02073 (9)−0.13820 (9)0.63755 (13)0.0386 (3)
H13−0.0233−0.14090.53730.046*
C140.40351 (9)0.04175 (9)0.22118 (14)0.0425 (3)
C150.33767 (10)0.04307 (10)0.09494 (15)0.0488 (3)
H150.29130.09300.07690.059*
C160.34062 (10)−0.03057 (11)−0.00606 (15)0.0508 (3)
H160.2964−0.0299−0.09270.061*
C170.40900 (10)−0.10480 (10)0.02181 (15)0.0479 (3)
C180.47462 (11)−0.10467 (11)0.14910 (16)0.0546 (4)
H180.5211−0.15440.16790.066*
C190.47204 (10)−0.03162 (11)0.24862 (16)0.0512 (3)
H190.5167−0.03180.33480.061*
C200.35584 (16)−0.18189 (16)−0.2055 (2)0.0799 (5)
H20A0.2878−0.1767−0.19200.120*
H20B0.3653−0.2416−0.25550.120*
H20C0.3727−0.1276−0.26210.120*
N10.29165 (7)0.02406 (7)0.42238 (11)0.0374 (2)
N20.17080 (7)−0.05379 (7)0.54614 (10)0.0340 (2)
N30.15774 (7)0.05932 (7)0.71772 (10)0.0357 (2)
N4−0.09155 (9)−0.18655 (9)0.84645 (13)0.0512 (3)
O10.40353 (7)0.11775 (7)0.32231 (11)0.0511 (2)
O20.41700 (9)−0.18162 (9)−0.06945 (12)0.0716 (3)
U11U22U33U12U13U23
C10.0354 (6)0.0366 (6)0.0433 (6)−0.0005 (4)0.0079 (5)0.0034 (5)
C20.0382 (6)0.0315 (6)0.0517 (7)−0.0044 (5)0.0052 (5)−0.0009 (5)
C30.0407 (6)0.0313 (5)0.0433 (6)−0.0008 (5)0.0022 (5)−0.0056 (5)
C40.0353 (5)0.0304 (5)0.0338 (5)0.0009 (4)0.0027 (4)−0.0008 (4)
C50.0350 (5)0.0299 (5)0.0338 (5)0.0000 (4)0.0042 (4)0.0004 (4)
C60.0364 (5)0.0316 (5)0.0318 (5)0.0020 (4)0.0057 (4)0.0008 (4)
C70.0471 (7)0.0287 (5)0.0468 (7)−0.0017 (5)0.0128 (5)−0.0070 (5)
C80.0681 (9)0.0502 (8)0.0454 (7)−0.0077 (7)0.0075 (7)−0.0135 (6)
C90.0375 (6)0.0297 (5)0.0360 (5)0.0038 (4)0.0084 (4)0.0031 (4)
C100.0508 (7)0.0416 (6)0.0365 (6)−0.0059 (5)0.0091 (5)−0.0021 (5)
C110.0647 (9)0.0483 (7)0.0403 (7)−0.0071 (6)0.0187 (6)0.0014 (6)
C120.0408 (7)0.0469 (7)0.0496 (7)−0.0049 (5)0.0064 (5)0.0004 (6)
C130.0394 (6)0.0402 (6)0.0357 (6)0.0012 (5)0.0044 (5)0.0025 (5)
C140.0419 (6)0.0421 (6)0.0470 (7)−0.0027 (5)0.0181 (5)0.0038 (5)
C150.0454 (7)0.0443 (7)0.0571 (8)0.0077 (6)0.0097 (6)0.0095 (6)
C160.0489 (7)0.0559 (8)0.0462 (7)0.0039 (6)0.0025 (6)0.0070 (6)
C170.0490 (7)0.0491 (7)0.0473 (7)0.0052 (6)0.0129 (6)0.0019 (6)
C180.0499 (8)0.0579 (9)0.0554 (8)0.0177 (7)0.0060 (6)0.0030 (7)
C190.0466 (7)0.0594 (9)0.0468 (7)0.0080 (6)0.0045 (6)0.0042 (6)
C200.0881 (13)0.0854 (13)0.0627 (11)0.0002 (11)0.0005 (9)−0.0198 (10)
N10.0399 (5)0.0342 (5)0.0396 (5)−0.0011 (4)0.0109 (4)−0.0010 (4)
N20.0402 (5)0.0285 (4)0.0342 (5)−0.0025 (4)0.0085 (4)−0.0030 (4)
N30.0396 (5)0.0329 (5)0.0346 (5)0.0001 (4)0.0060 (4)−0.0017 (4)
N40.0538 (7)0.0511 (7)0.0517 (7)−0.0089 (5)0.0174 (5)0.0016 (5)
O10.0557 (6)0.0447 (5)0.0585 (6)−0.0112 (4)0.0262 (5)−0.0036 (4)
O20.0796 (8)0.0689 (7)0.0634 (7)0.0212 (6)0.0021 (6)−0.0142 (6)
C1—N11.3161 (15)C10—H100.9300
C1—O11.3667 (14)C11—N41.3312 (18)
C1—C21.4020 (17)C11—H110.9300
C2—C31.3744 (17)C12—N41.3322 (17)
C2—H20.9300C12—C131.3823 (17)
C3—C41.3928 (16)C12—H120.9300
C3—H30.9300C13—H130.9300
C4—N31.3842 (14)C14—C151.365 (2)
C4—C51.3924 (15)C14—C191.3708 (19)
C5—N11.3328 (14)C14—O11.4048 (16)
C5—N21.3724 (14)C15—C161.385 (2)
C6—N31.3192 (14)C15—H150.9300
C6—N21.3788 (13)C16—C171.3784 (19)
C6—C91.4686 (15)C16—H160.9300
C7—N21.4638 (14)C17—O21.3687 (17)
C7—C81.5066 (19)C17—C181.371 (2)
C7—H7A0.9700C18—C191.369 (2)
C7—H7B0.9700C18—H180.9300
C8—H8A0.9600C19—H190.9300
C8—H8B0.9600C20—O21.406 (2)
C8—H8C0.9600C20—H20A0.9600
C9—C131.3857 (17)C20—H20B0.9600
C9—C101.3899 (16)C20—H20C0.9600
C10—C111.3786 (18)
N1—C1—O1118.16 (10)N4—C12—C13124.07 (13)
N1—C1—C2125.63 (11)N4—C12—H12118.0
O1—C1—C2116.21 (10)C13—C12—H12118.0
C3—C2—C1119.44 (11)C12—C13—C9118.98 (11)
C3—C2—H2120.3C12—C13—H13120.5
C1—C2—H2120.3C9—C13—H13120.5
C2—C3—C4117.22 (11)C15—C14—C19120.64 (13)
C2—C3—H3121.4C15—C14—O1119.97 (12)
C4—C3—H3121.4C19—C14—O1119.35 (13)
N3—C4—C5109.76 (10)C14—C15—C16119.40 (13)
N3—C4—C3133.26 (10)C14—C15—H15120.3
C5—C4—C3116.98 (10)C16—C15—H15120.3
N1—C5—N2125.53 (10)C17—C16—C15120.04 (13)
N1—C5—C4127.79 (10)C17—C16—H16120.0
N2—C5—C4106.68 (9)C15—C16—H16120.0
N3—C6—N2113.32 (9)O2—C17—C18115.72 (12)
N3—C6—C9122.41 (10)O2—C17—C16124.63 (13)
N2—C6—C9124.27 (10)C18—C17—C16119.66 (13)
N2—C7—C8112.19 (10)C19—C18—C17120.31 (13)
N2—C7—H7A109.2C19—C18—H18119.8
C8—C7—H7A109.2C17—C18—H18119.8
N2—C7—H7B109.2C18—C19—C14119.94 (13)
C8—C7—H7B109.2C18—C19—H19120.0
H7A—C7—H7B107.9C14—C19—H19120.0
C7—C8—H8A109.5O2—C20—H20A109.5
C7—C8—H8B109.5O2—C20—H20B109.5
H8A—C8—H8B109.5H20A—C20—H20B109.5
C7—C8—H8C109.5O2—C20—H20C109.5
H8A—C8—H8C109.5H20A—C20—H20C109.5
H8B—C8—H8C109.5H20B—C20—H20C109.5
C13—C9—C10117.46 (11)C1—N1—C5112.91 (10)
C13—C9—C6123.59 (10)C5—N2—C6105.53 (9)
C10—C9—C6118.91 (11)C5—N2—C7122.62 (9)
C11—C10—C9118.99 (12)C6—N2—C7131.19 (9)
C11—C10—H10120.5C6—N3—C4104.72 (9)
C9—C10—H10120.5C11—N4—C12116.31 (11)
N4—C11—C10124.17 (12)C1—O1—C14116.08 (9)
N4—C11—H11117.9C17—O2—C20117.96 (13)
C10—C11—H11117.9
N1—C1—C2—C3−1.3 (2)O1—C14—C19—C18−178.17 (12)
O1—C1—C2—C3178.21 (11)O1—C1—N1—C5−177.83 (11)
C1—C2—C3—C4−0.17 (18)C2—C1—N1—C51.63 (18)
C2—C3—C4—N3−179.45 (12)N2—C5—N1—C1179.15 (11)
C2—C3—C4—C50.96 (16)C4—C5—N1—C1−0.73 (17)
N3—C4—C5—N1179.77 (11)N1—C5—N2—C6−179.62 (11)
C3—C4—C5—N1−0.54 (18)C4—C5—N2—C60.28 (12)
N3—C4—C5—N2−0.12 (13)N1—C5—N2—C78.72 (18)
C3—C4—C5—N2179.56 (10)C4—C5—N2—C7−171.38 (10)
N3—C6—C9—C13142.45 (12)N3—C6—N2—C5−0.36 (13)
N2—C6—C9—C13−37.09 (17)C9—C6—N2—C5179.21 (10)
N3—C6—C9—C10−35.08 (17)N3—C6—N2—C7170.30 (11)
N2—C6—C9—C10145.39 (12)C9—C6—N2—C7−10.13 (19)
C13—C9—C10—C11−0.54 (19)C8—C7—N2—C5−76.72 (15)
C6—C9—C10—C11177.14 (12)C8—C7—N2—C6113.98 (14)
C9—C10—C11—N41.3 (2)N2—C6—N3—C40.28 (13)
N4—C12—C13—C91.1 (2)C9—C6—N3—C4−179.30 (10)
C10—C9—C13—C12−0.60 (17)C5—C4—N3—C6−0.09 (13)
C6—C9—C13—C12−178.16 (11)C3—C4—N3—C6−179.70 (13)
C19—C14—C15—C16−0.1 (2)C10—C11—N4—C12−0.8 (2)
O1—C14—C15—C16177.83 (11)C13—C12—N4—C11−0.4 (2)
C14—C15—C16—C170.6 (2)N1—C1—O1—C14−0.86 (17)
C15—C16—C17—O2178.89 (13)C2—C1—O1—C14179.63 (11)
C15—C16—C17—C18−0.7 (2)C15—C14—O1—C190.64 (14)
O2—C17—C18—C19−179.25 (14)C19—C14—O1—C1−91.40 (14)
C16—C17—C18—C190.4 (2)C18—C17—O2—C20−175.90 (15)
C17—C18—C19—C140.1 (2)C16—C17—O2—C204.5 (2)
C15—C14—C19—C18−0.2 (2)
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