| Literature DB >> 21837143 |
Waka Nakanishi1, Jing Yang Xue, Tomoaki Yoshioka, Hiroyuki Isobe.
Abstract
Single crystals of a macrocyclic hydro-carbon, [6]cyclo-2,7-naphthyl-ene ([6]CNAP, C(60)H(36)) were prepared from anthracene melt with a prolonged time for the recrystallization. The crystal of improved quality led to the correction of the space-group assignment to Cmca from [Formula: see text] in the original determination [Nakanishi et al. (2011 ▶) Angew. Chem. Int. Ed.50, 5323-5326] and the refinement of anisotropic displacement parameters of all C atoms. The refined mol-ecular structure with C(2h) point symmetry indicated that the strain on the naphthyl rings of [6]CNAP is smallest among the congeners. Despite the large macrocyclic structure, mol-ecules are packed in a ubiquitous herringbone motif. A short C-C distance of 3.119 (4) Å was found in the stacking direction, and a short C-H distance of 2.80 Å was found in the inter-columnar contact.Entities:
Year: 2011 PMID: 21837143 PMCID: PMC3152034 DOI: 10.1107/S1600536811023427
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C60H36 | |
| Orthorhombic, | Mo |
| Hall symbol: -C 2bc 2 | Cell parameters from 5445 reflections |
| θ = 2.4–27.2° | |
| µ = 0.07 mm−1 | |
| Plate, colourless | |
| 0.40 × 0.12 × 0.06 mm |
| Bruker APEXII CCD area-detector diffractometer | 2234 independent reflections |
| Radiation source: Bruker TXS fine-focus rotating anode | 1667 reflections with |
| Bruker Helios multilayer confocal mirror | |
| Detector resolution: 8.333 pixels mm-1 | θmax = 27.5°, θmin = 2.4° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 20522 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2234 reflections | (Δ/σ)max < 0.001 |
| 139 parameters | Δρmax = 0.20 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.28550 (9) | 0.7008 (6) | 0.37933 (17) | 0.0855 (12) | |
| H1 | 0.2623 | 0.6634 | 0.3504 | 0.103* | |
| C2 | 0.28488 (8) | 0.8521 (5) | 0.43007 (18) | 0.0805 (11) | |
| H2 | 0.2610 | 0.9154 | 0.4371 | 0.097* | |
| C3 | 0.31917 (7) | 0.9174 (4) | 0.47282 (14) | 0.0599 (7) | |
| C4 | 0.35317 (7) | 0.8204 (3) | 0.46178 (14) | 0.0521 (6) | |
| H3 | 0.3764 | 0.8613 | 0.4897 | 0.062* | |
| C5 | 0.35467 (8) | 0.6627 (4) | 0.41049 (14) | 0.0546 (7) | |
| C6 | 0.32004 (9) | 0.5987 (5) | 0.36887 (15) | 0.0705 (9) | |
| C7 | 0.32231 (11) | 0.4362 (5) | 0.32059 (16) | 0.0842 (12) | |
| H4 | 0.2997 | 0.3918 | 0.2916 | 0.101* | |
| C8 | 0.35645 (11) | 0.3425 (4) | 0.31496 (15) | 0.0777 (11) | |
| H5 | 0.3570 | 0.2332 | 0.2828 | 0.093* | |
| C9 | 0.39145 (9) | 0.4048 (3) | 0.35623 (14) | 0.0599 (8) | |
| C10 | 0.38962 (8) | 0.5646 (3) | 0.40197 (13) | 0.0518 (6) | |
| H6 | 0.4127 | 0.6100 | 0.4286 | 0.062* | |
| C11 | 0.46345 (13) | 0.0185 (3) | 0.35550 (17) | 0.0872 (12) | |
| H7 | 0.4628 | −0.1088 | 0.3562 | 0.105* | |
| C12 | 0.42913 (13) | 0.1103 (4) | 0.35358 (16) | 0.0781 (11) | |
| H8 | 0.4052 | 0.0460 | 0.3522 | 0.094* | |
| C13 | 0.42846 (10) | 0.3024 (3) | 0.35367 (14) | 0.0602 (8) | |
| C14 | 0.46407 (8) | 0.3892 (3) | 0.35413 (14) | 0.0542 (7) | |
| H9 | 0.4643 | 0.5165 | 0.3534 | 0.065* | |
| C15 | 0.5000 | 0.2979 (4) | 0.35555 (19) | 0.0556 (10) | |
| C16 | 0.5000 | 0.1066 (4) | 0.3565 (2) | 0.0708 (13) |
| C1 | 0.0610 (18) | 0.162 (4) | 0.0339 (13) | −0.048 (2) | −0.0068 (12) | 0.0195 (17) |
| C2 | 0.0528 (16) | 0.151 (3) | 0.0375 (13) | −0.0189 (18) | −0.0027 (11) | 0.0297 (17) |
| C3 | 0.0481 (13) | 0.100 (2) | 0.0322 (11) | −0.0087 (13) | −0.0009 (9) | 0.0234 (11) |
| C4 | 0.0553 (14) | 0.0695 (15) | 0.0314 (10) | −0.0175 (12) | −0.0064 (9) | 0.0157 (10) |
| C5 | 0.0663 (16) | 0.0706 (16) | 0.0270 (10) | −0.0286 (13) | −0.0066 (10) | 0.0130 (10) |
| C6 | 0.0719 (18) | 0.114 (2) | 0.0260 (10) | −0.0495 (17) | −0.0031 (10) | 0.0138 (13) |
| C7 | 0.094 (2) | 0.129 (3) | 0.0301 (12) | −0.074 (2) | −0.0006 (13) | 0.0028 (15) |
| C8 | 0.116 (3) | 0.088 (2) | 0.0281 (11) | −0.071 (2) | 0.0065 (14) | −0.0042 (12) |
| C9 | 0.098 (2) | 0.0553 (14) | 0.0264 (10) | −0.0412 (15) | −0.0006 (11) | 0.0023 (9) |
| C10 | 0.0732 (16) | 0.0537 (13) | 0.0286 (10) | −0.0308 (12) | −0.0056 (10) | 0.0062 (9) |
| C11 | 0.197 (4) | 0.0250 (12) | 0.0396 (13) | −0.0237 (18) | 0.0074 (18) | −0.0075 (10) |
| C12 | 0.160 (3) | 0.0402 (14) | 0.0340 (12) | −0.0427 (18) | 0.0088 (16) | −0.0048 (10) |
| C13 | 0.114 (2) | 0.0398 (12) | 0.0267 (10) | −0.0318 (14) | 0.0039 (12) | −0.0045 (9) |
| C14 | 0.106 (2) | 0.0247 (9) | 0.0321 (10) | −0.0139 (11) | 0.0003 (11) | −0.0036 (8) |
| C15 | 0.114 (3) | 0.0230 (14) | 0.0300 (14) | 0.000 | 0.000 | −0.0045 (11) |
| C16 | 0.157 (4) | 0.0237 (15) | 0.0318 (16) | 0.000 | 0.000 | −0.0046 (12) |
| C1—C2 | 1.365 (5) | C8—H5 | 0.9500 |
| C1—C6 | 1.416 (5) | C9—C10 | 1.381 (3) |
| C1—H1 | 0.9500 | C9—C13 | 1.480 (4) |
| C2—C3 | 1.426 (4) | C10—H6 | 0.9500 |
| C2—H2 | 0.9500 | C11—C12 | 1.360 (5) |
| C3—C4 | 1.380 (3) | C11—C16 | 1.413 (4) |
| C3—C3i | 1.482 (6) | C11—H7 | 0.9500 |
| C4—C5 | 1.410 (4) | C12—C13 | 1.434 (4) |
| C4—H3 | 0.9500 | C12—H8 | 0.9500 |
| C5—C10 | 1.408 (4) | C13—C14 | 1.380 (4) |
| C5—C6 | 1.425 (3) | C14—C15 | 1.406 (3) |
| C6—C7 | 1.418 (5) | C14—H9 | 0.9500 |
| C7—C8 | 1.364 (5) | C15—C14ii | 1.406 (3) |
| C7—H4 | 0.9500 | C15—C16 | 1.428 (4) |
| C8—C9 | 1.429 (4) | C16—C11ii | 1.413 (4) |
| C2—C1—C6 | 121.4 (3) | C10—C9—C8 | 117.5 (3) |
| C2—C1—H1 | 119.3 | C10—C9—C13 | 119.9 (2) |
| C6—C1—H1 | 119.3 | C8—C9—C13 | 122.6 (3) |
| C1—C2—C3 | 121.7 (3) | C9—C10—C5 | 122.3 (2) |
| C1—C2—H2 | 119.2 | C9—C10—H6 | 118.9 |
| C3—C2—H2 | 119.2 | C5—C10—H6 | 118.9 |
| C4—C3—C2 | 117.4 (3) | C12—C11—C16 | 122.0 (2) |
| C4—C3—C3i | 120.22 (15) | C12—C11—H7 | 119.0 |
| C2—C3—C3i | 122.4 (2) | C16—C11—H7 | 119.0 |
| C3—C4—C5 | 122.3 (2) | C11—C12—C13 | 121.2 (3) |
| C3—C4—H3 | 118.8 | C11—C12—H8 | 119.4 |
| C5—C4—H3 | 118.8 | C13—C12—H8 | 119.4 |
| C10—C5—C4 | 121.0 (2) | C14—C13—C12 | 117.1 (3) |
| C10—C5—C6 | 119.4 (3) | C14—C13—C9 | 120.9 (2) |
| C4—C5—C6 | 119.5 (3) | C12—C13—C9 | 122.0 (3) |
| C1—C6—C7 | 124.3 (3) | C13—C14—C15 | 123.0 (2) |
| C1—C6—C5 | 117.7 (3) | C13—C14—H9 | 118.5 |
| C7—C6—C5 | 118.0 (3) | C15—C14—H9 | 118.5 |
| C8—C7—C6 | 121.2 (3) | C14ii—C15—C14 | 122.0 (3) |
| C8—C7—H4 | 119.4 | C14ii—C15—C16 | 118.99 (13) |
| C6—C7—H4 | 119.4 | C14—C15—C16 | 118.99 (13) |
| C7—C8—C9 | 121.6 (3) | C11ii—C16—C11 | 124.5 (4) |
| C7—C8—H5 | 119.2 | C11ii—C16—C15 | 117.71 (19) |
| C9—C8—H5 | 119.2 | C11—C16—C15 | 117.71 (19) |
| C6—C1—C2—C3 | 1.9 (4) | C4—C5—C10—C9 | 176.39 (19) |
| C1—C2—C3—C4 | −0.7 (4) | C6—C5—C10—C9 | −1.7 (3) |
| C1—C2—C3—C3i | 179.2 (3) | C16—C11—C12—C13 | −0.9 (4) |
| C2—C3—C4—C5 | 0.1 (3) | C11—C12—C13—C14 | 1.2 (4) |
| C3i—C3—C4—C5 | −179.8 (2) | C11—C12—C13—C9 | −176.8 (2) |
| C3—C4—C5—C10 | −178.7 (2) | C10—C9—C13—C14 | −33.1 (3) |
| C3—C4—C5—C6 | −0.6 (3) | C8—C9—C13—C14 | 148.8 (2) |
| C2—C1—C6—C7 | 177.0 (2) | C10—C9—C13—C12 | 144.8 (2) |
| C2—C1—C6—C5 | −2.3 (4) | C8—C9—C13—C12 | −33.2 (3) |
| C10—C5—C6—C1 | 179.8 (2) | C12—C13—C14—C15 | −0.8 (3) |
| C4—C5—C6—C1 | 1.7 (3) | C9—C13—C14—C15 | 177.2 (2) |
| C10—C5—C6—C7 | 0.4 (3) | C13—C14—C15—C14ii | 178.65 (17) |
| C4—C5—C6—C7 | −177.7 (2) | C13—C14—C15—C16 | 0.1 (4) |
| C1—C6—C7—C8 | −178.5 (2) | C12—C11—C16—C11ii | −177.8 (2) |
| C5—C6—C7—C8 | 0.8 (4) | C12—C11—C16—C15 | 0.1 (4) |
| C6—C7—C8—C9 | −0.9 (4) | C14ii—C15—C16—C11ii | −0.3 (4) |
| C7—C8—C9—C10 | −0.3 (3) | C14—C15—C16—C11ii | 178.3 (2) |
| C7—C8—C9—C13 | 177.8 (2) | C14ii—C15—C16—C11 | −178.3 (2) |
| C8—C9—C10—C5 | 1.6 (3) | C14—C15—C16—C11 | 0.3 (4) |
| C13—C9—C10—C5 | −176.57 (19) |