Literature DB >> 21837108

25,26,27,28-Tetra-kis(3-bromo-benzyl-oxy)calix[4]arene.

Eunji Lee, Suk-Hee Moon, Tae Ho Kim, Ki-Min Park.   

Abstract

In the title compound, C(56)H(44)Br(4)O(4), the calix[4]arene unit displays the 1,2-alternate conformation with crystallograpically imposed inversion symmetry. The four phen-oxy rings of the calix[4]arene unit are twisted about the mean plane defined by the four methyl-ene C atoms bridging the benzene rings, with dihedral angles of 46.73 (6) and 66.11 (5)°. The dihedral angle between adjacent phen-oxy rings is 74.75 (7)°. The two pendant bromo-phenyl rings on the same side of the calix[4]arene unit are nearly perpendicular to each other, with a dihedral angle of 72.85 (10)° due to an intra-molecular C-H⋯π inter-action. In the crystal, a Br⋯Br contact of 3.6350 (5) Å, an inter-molecular C-H⋯Br hydrogen bond and an inter-molecular C-H⋯π inter-action are observed.

Entities:  

Year:  2011        PMID: 21837108      PMCID: PMC3151756          DOI: 10.1107/S1600536811022975

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For calix[4]arene chemistry and its applications, see: Gutsche (2008 ▶); Ikeda & Shinkai (1997 ▶). For the use of calixarenes in crystal engineering, see: Dalgrano et al. (2007 ▶). For the modification of calix[4]arenes, see: Asfari et al. (2001 ▶); Mandolini & Ungaro (2000 ▶).

Experimental

Crystal data

C56H44Br4O4 M = 1100.55 Monoclinic, a = 13.4377 (8) Å b = 10.4789 (7) Å c = 17.1666 (12) Å β = 103.822 (2)° V = 2347.3 (3) Å3 Z = 2 Mo Kα radiation μ = 3.48 mm−1 T = 173 K 0.21 × 0.20 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996) ▶ T min = 0.529, T max = 0.624 22506 measured reflections 5813 independent reflections 3929 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.106 S = 1.02 5813 reflections 289 parameters H-atom parameters constrained Δρmax = 0.63 e Å−3 Δρmin = −0.91 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811022975/wn2436sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022975/wn2436Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C56H44Br4O4F(000) = 1104
Mr = 1100.55Dx = 1.557 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5179 reflections
a = 13.4377 (8) Åθ = 2.3–27.1°
b = 10.4789 (7) ŵ = 3.48 mm1
c = 17.1666 (12) ÅT = 173 K
β = 103.822 (2)°Block, colourless
V = 2347.3 (3) Å30.21 × 0.20 × 0.15 mm
Z = 2
Bruker APEXII CCD diffractometer5813 independent reflections
Radiation source: fine-focus sealed tube3929 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scansθmax = 28.3°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→17
Tmin = 0.529, Tmax = 0.624k = −13→10
22506 measured reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0447P)2 + 1.723P] where P = (Fo2 + 2Fc2)/3
5813 reflections(Δ/σ)max = 0.001
289 parametersΔρmax = 0.63 e Å3
0 restraintsΔρmin = −0.91 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.41607 (3)0.68787 (4)0.35182 (2)0.06529 (14)
Br20.48689 (2)1.06993 (6)0.31500 (3)0.0952 (2)
O10.15137 (12)0.85506 (17)0.55860 (10)0.0291 (4)
O20.04423 (11)0.96810 (15)0.38948 (9)0.0242 (3)
C10.07450 (16)0.7816 (2)0.57737 (13)0.0232 (5)
C20.01333 (17)0.7075 (2)0.51741 (14)0.0244 (5)
C3−0.06427 (18)0.6351 (2)0.53749 (15)0.0288 (5)
H3−0.10490.58050.49830.035*
C4−0.08325 (19)0.6411 (2)0.61272 (15)0.0310 (5)
H4−0.13570.59020.62540.037*
C5−0.02539 (18)0.7217 (2)0.66956 (14)0.0283 (5)
H5−0.04050.72820.72070.034*
C60.05422 (17)0.7931 (2)0.65368 (13)0.0249 (5)
C7−0.04927 (16)0.9096 (2)0.35766 (12)0.0222 (5)
C8−0.12770 (17)0.9807 (2)0.30901 (13)0.0255 (5)
C9−0.22207 (18)0.9204 (3)0.28019 (15)0.0336 (6)
H9−0.27750.96690.24780.040*
C10−0.23581 (19)0.7942 (3)0.29812 (16)0.0388 (7)
H10−0.30020.75420.27760.047*
C11−0.15618 (19)0.7258 (3)0.34591 (15)0.0342 (6)
H11−0.16620.63860.35730.041*
C12−0.06149 (17)0.7829 (2)0.37760 (13)0.0245 (5)
C130.02461 (18)0.7085 (2)0.43178 (14)0.0266 (5)
H13A0.02410.61960.41210.032*
H13B0.09120.74740.43010.032*
C14−0.11303 (18)1.1161 (2)0.28319 (14)0.0284 (5)
H14A−0.18171.15330.26090.034*
H14B−0.07741.11240.23900.034*
C150.25431 (18)0.8158 (3)0.59555 (16)0.0380 (6)
H15A0.25730.78620.65080.046*
H15B0.30070.89010.59910.046*
C160.29142 (17)0.7103 (3)0.54979 (16)0.0333 (6)
C170.32711 (17)0.7399 (3)0.48246 (16)0.0318 (6)
H170.32720.82590.46500.038*
C180.36244 (19)0.6437 (3)0.44102 (18)0.0412 (7)
C190.3620 (2)0.5183 (3)0.4642 (3)0.0606 (10)
H190.38580.45300.43480.073*
C200.3264 (3)0.4894 (3)0.5308 (3)0.0694 (11)
H200.32540.40320.54770.083*
C210.2918 (2)0.5851 (3)0.5734 (2)0.0536 (8)
H210.26810.56380.61960.064*
C220.11169 (17)0.9651 (3)0.33740 (15)0.0305 (5)
H22A0.08121.01280.28770.037*
H22B0.12260.87580.32260.037*
C230.21228 (17)1.0240 (2)0.37845 (16)0.0306 (5)
C240.28954 (19)1.0230 (3)0.33757 (17)0.0411 (7)
H240.27760.98760.28520.049*
C250.3838 (2)1.0737 (3)0.3736 (2)0.0532 (9)
C260.4038 (2)1.1250 (3)0.4500 (2)0.0551 (9)
H260.46931.15910.47430.066*
C270.3268 (2)1.1255 (3)0.4897 (2)0.0485 (8)
H270.33961.16000.54230.058*
C280.23048 (19)1.0765 (2)0.45464 (17)0.0362 (6)
H280.17751.07890.48270.043*
U11U22U33U12U13U23
Br10.04985 (19)0.0996 (3)0.0523 (2)−0.00434 (18)0.02381 (15)−0.02819 (19)
Br20.03236 (17)0.1775 (5)0.0785 (3)−0.0192 (2)0.01840 (17)0.0392 (3)
O10.0268 (8)0.0341 (10)0.0280 (9)−0.0023 (7)0.0100 (7)0.0013 (7)
O20.0220 (7)0.0264 (9)0.0235 (8)−0.0031 (6)0.0043 (6)−0.0022 (7)
C10.0246 (10)0.0223 (13)0.0237 (11)0.0041 (9)0.0081 (9)0.0044 (9)
C20.0309 (11)0.0191 (13)0.0247 (12)0.0048 (9)0.0097 (9)0.0025 (9)
C30.0345 (12)0.0226 (13)0.0292 (12)−0.0022 (10)0.0076 (10)0.0014 (10)
C40.0358 (12)0.0264 (14)0.0329 (13)−0.0022 (10)0.0126 (10)0.0073 (11)
C50.0359 (12)0.0284 (14)0.0230 (12)0.0035 (10)0.0116 (10)0.0070 (10)
C60.0299 (11)0.0228 (13)0.0219 (11)0.0052 (9)0.0061 (9)0.0036 (9)
C70.0232 (10)0.0287 (13)0.0153 (10)−0.0039 (9)0.0058 (8)−0.0054 (9)
C80.0268 (11)0.0317 (14)0.0178 (11)−0.0006 (10)0.0052 (9)−0.0031 (10)
C90.0273 (11)0.0467 (18)0.0246 (12)−0.0027 (11)0.0018 (9)−0.0032 (11)
C100.0302 (12)0.0511 (19)0.0322 (14)−0.0151 (12)0.0019 (10)−0.0062 (13)
C110.0396 (13)0.0346 (16)0.0288 (13)−0.0142 (11)0.0090 (11)−0.0038 (11)
C120.0310 (11)0.0281 (14)0.0157 (10)−0.0026 (9)0.0083 (9)−0.0040 (9)
C130.0345 (12)0.0227 (13)0.0241 (12)0.0012 (10)0.0100 (9)−0.0025 (10)
C140.0321 (11)0.0333 (15)0.0190 (11)0.0037 (10)0.0043 (9)0.0037 (10)
C150.0241 (11)0.0573 (19)0.0321 (14)−0.0014 (12)0.0055 (10)−0.0067 (13)
C160.0216 (11)0.0373 (16)0.0398 (14)−0.0032 (10)0.0048 (10)0.0015 (12)
C170.0255 (11)0.0316 (15)0.0383 (14)0.0007 (10)0.0074 (10)−0.0034 (11)
C180.0263 (12)0.0485 (19)0.0482 (17)−0.0011 (12)0.0075 (11)−0.0144 (14)
C190.0419 (16)0.036 (2)0.103 (3)0.0035 (14)0.0153 (18)−0.0216 (19)
C200.059 (2)0.034 (2)0.117 (3)−0.0004 (16)0.023 (2)0.011 (2)
C210.0449 (16)0.050 (2)0.068 (2)−0.0045 (14)0.0173 (15)0.0152 (17)
C220.0261 (11)0.0352 (15)0.0313 (13)−0.0037 (10)0.0091 (10)−0.0013 (11)
C230.0252 (11)0.0253 (14)0.0395 (14)−0.0013 (10)0.0041 (10)0.0096 (11)
C240.0294 (12)0.0518 (18)0.0410 (15)−0.0039 (12)0.0059 (11)0.0169 (14)
C250.0264 (12)0.072 (2)0.060 (2)−0.0057 (14)0.0089 (13)0.0288 (18)
C260.0299 (14)0.055 (2)0.070 (2)−0.0142 (14)−0.0072 (14)0.0151 (18)
C270.0420 (15)0.0365 (18)0.0589 (19)−0.0057 (13)−0.0041 (14)−0.0049 (15)
C280.0309 (12)0.0285 (15)0.0465 (16)−0.0027 (11)0.0037 (11)−0.0010 (12)
Br1—C181.899 (3)C14—C6i1.515 (3)
Br2—C251.897 (3)C14—H14A0.9900
O1—C11.387 (3)C14—H14B0.9900
O1—C151.437 (3)C15—C161.508 (4)
O2—C71.387 (3)C15—H15A0.9900
O2—C221.417 (3)C15—H15B0.9900
C1—C21.390 (3)C16—C211.373 (4)
C1—C61.406 (3)C16—C171.388 (4)
C2—C31.398 (3)C17—C181.382 (4)
C2—C131.513 (3)C17—H170.9500
C3—C41.376 (3)C18—C191.373 (5)
C3—H30.9500C19—C201.374 (6)
C4—C51.381 (4)C19—H190.9500
C4—H40.9500C20—C211.385 (5)
C5—C61.385 (3)C20—H200.9500
C5—H50.9500C21—H210.9500
C6—C14i1.515 (3)C22—C231.500 (3)
C7—C121.391 (3)C22—H22A0.9900
C7—C81.394 (3)C22—H22B0.9900
C8—C91.397 (3)C23—C241.385 (3)
C8—C141.514 (4)C23—C281.386 (4)
C9—C101.381 (4)C24—C251.376 (4)
C9—H90.9500C24—H240.9500
C10—C111.383 (4)C25—C261.383 (5)
C10—H100.9500C26—C271.367 (5)
C11—C121.394 (3)C26—H260.9500
C11—H110.9500C27—C281.389 (4)
C12—C131.516 (3)C27—H270.9500
C13—H13A0.9900C28—H280.9500
C13—H13B0.9900
C1—O1—C15115.49 (19)H14A—C14—H14B107.2
C7—O2—C22113.41 (16)O1—C15—C16112.5 (2)
O1—C1—C2118.64 (19)O1—C15—H15A109.1
O1—C1—C6119.3 (2)C16—C15—H15A109.1
C2—C1—C6121.7 (2)O1—C15—H15B109.1
C1—C2—C3117.7 (2)C16—C15—H15B109.1
C1—C2—C13122.5 (2)H15A—C15—H15B107.8
C3—C2—C13119.8 (2)C21—C16—C17118.8 (3)
C4—C3—C2121.5 (2)C21—C16—C15121.7 (3)
C4—C3—H3119.2C17—C16—C15119.5 (2)
C2—C3—H3119.2C18—C17—C16119.7 (3)
C3—C4—C5119.4 (2)C18—C17—H17120.2
C3—C4—H4120.3C16—C17—H17120.2
C5—C4—H4120.3C19—C18—C17121.6 (3)
C4—C5—C6121.5 (2)C19—C18—Br1119.7 (2)
C4—C5—H5119.3C17—C18—Br1118.7 (2)
C6—C5—H5119.3C18—C19—C20118.6 (3)
C5—C6—C1117.9 (2)C18—C19—H19120.7
C5—C6—C14i119.6 (2)C20—C19—H19120.7
C1—C6—C14i122.5 (2)C19—C20—C21120.5 (3)
O2—C7—C12118.30 (19)C19—C20—H20119.8
O2—C7—C8118.9 (2)C21—C20—H20119.8
C12—C7—C8122.7 (2)C16—C21—C20121.0 (3)
C7—C8—C9117.6 (2)C16—C21—H21119.5
C7—C8—C14122.9 (2)C20—C21—H21119.5
C9—C8—C14119.4 (2)O2—C22—C23109.6 (2)
C10—C9—C8120.8 (2)O2—C22—H22A109.8
C10—C9—H9119.6C23—C22—H22A109.8
C8—C9—H9119.6O2—C22—H22B109.8
C9—C10—C11120.2 (2)C23—C22—H22B109.8
C9—C10—H10119.9H22A—C22—H22B108.2
C11—C10—H10119.9C24—C23—C28119.8 (2)
C10—C11—C12120.9 (2)C24—C23—C22117.3 (2)
C10—C11—H11119.5C28—C23—C22122.9 (2)
C12—C11—H11119.5C25—C24—C23119.3 (3)
C7—C12—C11117.7 (2)C25—C24—H24120.3
C7—C12—C13121.6 (2)C23—C24—H24120.3
C11—C12—C13120.7 (2)C24—C25—C26121.7 (3)
C2—C13—C12111.12 (19)C24—C25—Br2117.7 (3)
C2—C13—H13A109.4C26—C25—Br2120.7 (2)
C12—C13—H13A109.4C27—C26—C25118.4 (3)
C2—C13—H13B109.4C27—C26—H26120.8
C12—C13—H13B109.4C25—C26—H26120.8
H13A—C13—H13B108.0C26—C27—C28121.4 (3)
C8—C14—C6i117.47 (19)C26—C27—H27119.3
C8—C14—H14A107.9C28—C27—H27119.3
C6i—C14—H14A107.9C23—C28—C27119.4 (3)
C8—C14—H14B107.9C23—C28—H28120.3
C6i—C14—H14B107.9C27—C28—H28120.3
C15—O1—C1—C2−112.0 (2)C1—C2—C13—C12−105.0 (2)
C15—O1—C1—C674.0 (3)C3—C2—C13—C1271.8 (3)
O1—C1—C2—C3−179.4 (2)C7—C12—C13—C297.3 (2)
C6—C1—C2—C3−5.6 (3)C11—C12—C13—C2−82.7 (3)
O1—C1—C2—C13−2.6 (3)C7—C8—C14—C6i−44.1 (3)
C6—C1—C2—C13171.2 (2)C9—C8—C14—C6i139.2 (2)
C1—C2—C3—C43.1 (4)C1—O1—C15—C1683.6 (3)
C13—C2—C3—C4−173.8 (2)O1—C15—C16—C21−100.1 (3)
C2—C3—C4—C50.9 (4)O1—C15—C16—C1780.5 (3)
C3—C4—C5—C6−2.6 (4)C21—C16—C17—C18−0.3 (4)
C4—C5—C6—C10.2 (3)C15—C16—C17—C18179.1 (2)
C4—C5—C6—C14i177.7 (2)C16—C17—C18—C190.8 (4)
O1—C1—C6—C5177.8 (2)C16—C17—C18—Br1−177.41 (18)
C2—C1—C6—C54.0 (3)C17—C18—C19—C20−0.7 (5)
O1—C1—C6—C14i0.3 (3)Br1—C18—C19—C20177.6 (3)
C2—C1—C6—C14i−173.5 (2)C18—C19—C20—C21−0.1 (5)
C22—O2—C7—C1295.5 (2)C17—C16—C21—C20−0.5 (4)
C22—O2—C7—C8−86.3 (2)C15—C16—C21—C20−179.9 (3)
O2—C7—C8—C9−177.8 (2)C19—C20—C21—C160.6 (5)
C12—C7—C8—C90.4 (3)C7—O2—C22—C23−176.98 (19)
O2—C7—C8—C145.5 (3)O2—C22—C23—C24176.7 (2)
C12—C7—C8—C14−176.3 (2)O2—C22—C23—C28−2.4 (3)
C7—C8—C9—C10−1.4 (3)C28—C23—C24—C250.3 (4)
C14—C8—C9—C10175.5 (2)C22—C23—C24—C25−178.7 (3)
C8—C9—C10—C110.8 (4)C23—C24—C25—C260.5 (5)
C9—C10—C11—C120.8 (4)C23—C24—C25—Br2−180.0 (2)
O2—C7—C12—C11179.3 (2)C24—C25—C26—C27−0.5 (5)
C8—C7—C12—C111.1 (3)Br2—C25—C26—C27180.0 (2)
O2—C7—C12—C13−0.8 (3)C25—C26—C27—C28−0.3 (5)
C8—C7—C12—C13−179.0 (2)C24—C23—C28—C27−1.1 (4)
C10—C11—C12—C7−1.7 (3)C22—C23—C28—C27177.9 (3)
C10—C11—C12—C13178.3 (2)C26—C27—C28—C231.1 (4)
Cg1 and Cg2 are the centroids of the C23–C28 and C7–C12 rings, respectively.
D—H···AD—HH···AD···AD—H···A
C15—H15B···Br2ii0.992.913.652 (2)132
C17—H17···Cg10.952.743.69175
C5—H5···Cg2iii0.952.683.54151
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C23–C28 and C7–C12 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15B⋯Br2i0.992.913.652 (2)132
C17—H17⋯Cg10.952.743.69175
C5—H5⋯Cg2ii0.952.683.54151

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Novel Cavity Design Using Calix[n]arene Skeletons: Toward Molecular Recognition and Metal Binding.

Authors:  Atsushi Ikeda; Seiji Shinkai
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

2.  Engineering void space in organic van der Waals crystals: calixarenes lead the way.

Authors:  Scott J Dalgarno; Praveen K Thallapally; Leonard J Barbour; Jerry L Atwood
Journal:  Chem Soc Rev       Date:  2007-01-02       Impact factor: 54.564

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total

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