Literature DB >> 21837100

Ethyl 6-(4-fluoro-phen-yl)-4-hy-droxy-2-oxo-4-trifluoro-meth-yl-1,3-diazinane-5-carboxyl-ate monohydrate.

Gong-Chun Li, Chang-Zeng Wu, Li-Li Guo, Feng-Ling Yang.   

Abstract

The asymmetric unit of the title compound, C(14)H(14)F(4)N(2)O(4)·H(2)O, contains two crystallographically independent organic mol-ecules and two water mol-ecules. The two 1,3-diazinane rings adopt a half-chair conformation and the dihedral angles between their mean planes and those of the benzene rings are 75.65 (4)° and 49.41 (3)° in the two mol-ecules. The crystal structure is stabilized by inter-molecular O-H⋯O and N-H⋯O hydrogen bonds.

Entities:  

Year:  2011        PMID: 21837100      PMCID: PMC3151995          DOI: 10.1107/S1600536811021866

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of dihydro­pyrimidines, see: Brier et al. (2004 ▶); Cochran et al. (2005 ▶); Moran et al. (2007 ▶); Zorkun et al. (2006 ▶). For the bioactivity of organofluorine compounds, see: Hermann et al. (2003 ▶); Ulrich (2004 ▶). For a related structure, see: Song et al. (2010 ▶).

Experimental

Crystal data

C14H14F4N2O4·H2O M = 368.29 Triclinic, a = 10.0196 (9) Å b = 12.1718 (12) Å c = 14.3037 (14) Å α = 98.463 (7)° β = 103.642 (8)° γ = 104.400 (9)° V = 1602.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.14 mm−1 T = 113 K 0.20 × 0.18 × 0.14 mm

Data collection

Rigaku Saturn CCD area detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2009 ▶) T min = 0.972, T max = 0.980 20692 measured reflections 7612 independent reflections 4575 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.072 S = 0.87 7612 reflections 493 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.35 e Å−3 Δρmin = −0.19 e Å−3 Data collection: CrystalClear (Rigaku, 2009 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811021866/jh2293sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021866/jh2293Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811021866/jh2293Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14F4N2O4·H2OZ = 4
Mr = 368.29F(000) = 760
Triclinic, P1Dx = 1.527 Mg m3
a = 10.0196 (9) ÅMo Kα radiation, λ = 0.71073 Å
b = 12.1718 (12) ÅCell parameters from 5664 reflections
c = 14.3037 (14) Åθ = 1.5–27.9°
α = 98.463 (7)°µ = 0.14 mm1
β = 103.642 (8)°T = 113 K
γ = 104.400 (9)°Prism, colorless
V = 1602.2 (3) Å30.20 × 0.18 × 0.14 mm
Rigaku Saturn CCD area detector diffractometer7612 independent reflections
Radiation source: rotating anode4575 reflections with I > 2σ(I)
multilayerRint = 0.041
Detector resolution: 14.63 pixels mm-1θmax = 27.9°, θmin = 1.5°
ω and φ scansh = −13→13
Absorption correction: multi-scan (CrystalClear; Rigaku, 2009)k = −16→14
Tmin = 0.972, Tmax = 0.980l = −18→18
20692 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.072H atoms treated by a mixture of independent and constrained refinement
S = 0.87w = 1/[σ2(Fo2) + (0.0267P)2] where P = (Fo2 + 2Fc2)/3
7612 reflections(Δ/σ)max = 0.001
493 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.21735 (8)0.30976 (7)0.47711 (6)0.0278 (2)
F20.44636 (9)0.33996 (7)0.51405 (6)0.0313 (2)
F30.30625 (9)0.19817 (7)0.39477 (6)0.0288 (2)
F40.49822 (9)0.38466 (7)1.13399 (6)0.0355 (2)
F5−0.11880 (8)0.62729 (6)0.98946 (6)0.02501 (19)
F60.01160 (8)0.72196 (7)1.13589 (6)0.02698 (19)
F70.09316 (8)0.61081 (6)1.04636 (6)0.02592 (19)
F80.28213 (9)0.78195 (7)0.49828 (6)0.0356 (2)
O10.57514 (10)0.02599 (8)0.62488 (6)0.0205 (2)
O20.16764 (10)0.09767 (8)0.52602 (7)0.0212 (2)
H20.1553 (16)0.0484 (13)0.4701 (12)0.041 (5)*
O30.10031 (10)0.25206 (8)0.67210 (7)0.0236 (2)
O40.27857 (9)0.41634 (7)0.69581 (7)0.0218 (2)
O50.44555 (9)0.97089 (7)1.10542 (6)0.0191 (2)
O6−0.00739 (10)0.86354 (8)0.99826 (7)0.0189 (2)
H60.0185 (16)0.9111 (13)1.0575 (12)0.039 (5)*
O7−0.13754 (10)0.74745 (8)0.79365 (7)0.0226 (2)
O8−0.07876 (9)0.58103 (7)0.79232 (6)0.0209 (2)
N10.41809 (12)0.11768 (10)0.55571 (8)0.0196 (3)
N20.45729 (12)0.10551 (10)0.71961 (8)0.0191 (3)
N30.22350 (12)0.84435 (9)1.06802 (8)0.0173 (2)
N40.31320 (12)0.91025 (10)0.94499 (8)0.0184 (3)
C10.48618 (14)0.07974 (11)0.63376 (9)0.0175 (3)
C20.30765 (14)0.17404 (11)0.55694 (9)0.0172 (3)
C30.32023 (15)0.25634 (12)0.48542 (10)0.0211 (3)
C40.33613 (14)0.24284 (11)0.66264 (9)0.0163 (3)
H40.43060.30440.68060.020*
C50.22216 (14)0.30121 (11)0.67569 (9)0.0177 (3)
C60.18167 (15)0.48463 (12)0.71134 (10)0.0256 (3)
H6A0.23810.56240.75300.031*
H6B0.11560.44570.74620.031*
C70.09575 (15)0.49743 (12)0.61357 (10)0.0292 (4)
H7A0.16130.52780.57600.044*
H7B0.04020.55130.62510.044*
H7C0.03010.42140.57620.044*
C80.34703 (14)0.16004 (11)0.73406 (9)0.0167 (3)
H80.25270.09860.71770.020*
C90.38729 (14)0.22261 (11)0.84106 (9)0.0169 (3)
C100.30035 (14)0.18702 (11)0.90023 (10)0.0198 (3)
H100.21350.12540.87230.024*
C110.33834 (15)0.23995 (12)0.99955 (10)0.0232 (3)
H110.27980.21431.04020.028*
C120.46237 (15)0.32993 (12)1.03707 (10)0.0235 (3)
C130.55181 (15)0.36883 (12)0.98175 (10)0.0259 (3)
H130.63740.43161.01010.031*
C140.51319 (15)0.31362 (12)0.88317 (10)0.0231 (3)
H140.57400.33850.84370.028*
C150.33267 (14)0.91286 (11)1.04127 (9)0.0164 (3)
C160.08059 (13)0.79019 (11)1.00238 (9)0.0157 (3)
C170.01571 (14)0.68607 (11)1.04325 (10)0.0196 (3)
C180.09283 (13)0.75018 (11)0.89773 (9)0.0157 (3)
H180.14810.69210.89940.019*
C19−0.05367 (14)0.69559 (11)0.82313 (9)0.0179 (3)
C20−0.21972 (15)0.51967 (11)0.72276 (10)0.0263 (3)
H20A−0.22920.54740.66050.032*
H20B−0.29680.53350.75100.032*
C21−0.23104 (15)0.39215 (11)0.70373 (10)0.0267 (3)
H21A−0.15170.38010.67850.040*
H21B−0.32280.34840.65500.040*
H21C−0.22590.36500.76530.040*
C220.17640 (13)0.85802 (11)0.86849 (9)0.0160 (3)
H220.12010.91530.86730.019*
C230.20333 (14)0.83296 (10)0.76879 (9)0.0162 (3)
C240.10992 (14)0.84699 (11)0.68548 (9)0.0197 (3)
H240.02760.86950.69150.024*
C250.13467 (15)0.82869 (11)0.59370 (10)0.0218 (3)
H250.06990.83730.53690.026*
C260.25512 (15)0.79791 (11)0.58763 (10)0.0233 (3)
C270.35117 (15)0.78274 (11)0.66745 (10)0.0225 (3)
H270.43360.76100.66040.027*
C280.32418 (14)0.80009 (11)0.75858 (10)0.0198 (3)
H280.38860.78950.81460.024*
O90.13823 (13)0.94116 (9)0.35763 (7)0.0243 (2)
O100.90924 (12)0.99386 (10)0.82314 (8)0.0282 (3)
H1A0.4218 (15)0.0862 (12)0.5014 (10)0.027 (4)*
H2A0.4935 (15)0.0714 (12)0.7678 (11)0.035 (4)*
H3A0.2281 (16)0.8644 (13)1.1265 (11)0.033 (5)*
H4A0.3906 (15)0.9527 (12)0.9307 (10)0.032 (4)*
H9A0.065 (2)0.8778 (17)0.3556 (14)0.081 (7)*
H9B0.215 (2)0.9295 (17)0.3632 (14)0.074 (8)*
H10A0.8938 (18)1.0100 (14)0.7657 (13)0.049 (5)*
H10B0.883 (2)0.9233 (18)0.8184 (14)0.080 (8)*
U11U22U33U12U13U23
F10.0324 (5)0.0316 (5)0.0278 (5)0.0196 (4)0.0087 (4)0.0144 (4)
F20.0268 (5)0.0318 (5)0.0332 (5)0.0016 (4)0.0064 (4)0.0162 (4)
F30.0391 (5)0.0352 (5)0.0176 (4)0.0168 (4)0.0097 (4)0.0099 (4)
F40.0378 (5)0.0467 (5)0.0169 (4)0.0151 (4)0.0028 (4)−0.0048 (4)
F50.0194 (4)0.0231 (4)0.0288 (5)0.0000 (4)0.0064 (4)0.0057 (4)
F60.0336 (5)0.0287 (4)0.0203 (4)0.0055 (4)0.0132 (4)0.0077 (4)
F70.0281 (5)0.0213 (4)0.0317 (5)0.0099 (4)0.0087 (4)0.0108 (4)
F80.0433 (5)0.0454 (5)0.0210 (5)0.0118 (5)0.0179 (4)0.0039 (4)
O10.0218 (5)0.0253 (5)0.0187 (5)0.0129 (4)0.0065 (4)0.0059 (4)
O20.0193 (5)0.0221 (5)0.0186 (5)0.0038 (4)0.0036 (4)0.0002 (4)
O30.0181 (5)0.0226 (5)0.0303 (6)0.0047 (4)0.0091 (4)0.0047 (4)
O40.0203 (5)0.0157 (5)0.0286 (6)0.0071 (4)0.0053 (4)0.0021 (4)
O50.0160 (5)0.0221 (5)0.0142 (5)0.0011 (4)0.0005 (4)0.0029 (4)
O60.0198 (5)0.0197 (5)0.0186 (5)0.0091 (4)0.0056 (4)0.0024 (4)
O70.0203 (5)0.0217 (5)0.0233 (5)0.0066 (4)0.0013 (4)0.0051 (4)
O80.0182 (5)0.0172 (5)0.0213 (5)0.0027 (4)−0.0001 (4)−0.0008 (4)
N10.0239 (7)0.0268 (6)0.0136 (6)0.0150 (5)0.0070 (5)0.0057 (5)
N20.0240 (7)0.0236 (6)0.0144 (6)0.0136 (5)0.0059 (5)0.0067 (5)
N30.0170 (6)0.0212 (6)0.0120 (6)0.0030 (5)0.0039 (5)0.0029 (5)
N40.0141 (6)0.0227 (6)0.0144 (6)0.0000 (5)0.0019 (5)0.0044 (5)
C10.0184 (7)0.0163 (7)0.0162 (7)0.0035 (6)0.0039 (6)0.0035 (5)
C20.0157 (7)0.0191 (7)0.0173 (7)0.0062 (6)0.0040 (6)0.0043 (6)
C30.0199 (8)0.0248 (7)0.0201 (7)0.0090 (6)0.0048 (6)0.0070 (6)
C40.0147 (7)0.0182 (7)0.0152 (7)0.0048 (6)0.0025 (6)0.0035 (5)
C50.0205 (8)0.0190 (7)0.0133 (7)0.0066 (6)0.0028 (6)0.0039 (5)
C60.0258 (8)0.0189 (7)0.0319 (8)0.0124 (6)0.0054 (7)−0.0003 (6)
C70.0308 (9)0.0266 (8)0.0327 (9)0.0143 (7)0.0064 (7)0.0085 (7)
C80.0169 (7)0.0180 (7)0.0158 (7)0.0060 (6)0.0047 (6)0.0036 (5)
C90.0182 (7)0.0180 (7)0.0172 (7)0.0096 (6)0.0047 (6)0.0051 (5)
C100.0179 (7)0.0221 (7)0.0196 (7)0.0074 (6)0.0047 (6)0.0037 (6)
C110.0225 (8)0.0327 (8)0.0193 (7)0.0127 (7)0.0090 (6)0.0079 (6)
C120.0260 (8)0.0299 (8)0.0145 (7)0.0148 (7)0.0015 (6)−0.0002 (6)
C130.0215 (8)0.0250 (8)0.0244 (8)0.0030 (6)0.0016 (6)−0.0007 (6)
C140.0218 (8)0.0253 (7)0.0223 (8)0.0051 (6)0.0084 (6)0.0057 (6)
C150.0180 (7)0.0151 (6)0.0171 (7)0.0062 (6)0.0044 (6)0.0048 (5)
C160.0140 (7)0.0167 (6)0.0154 (7)0.0043 (6)0.0030 (6)0.0034 (5)
C170.0189 (8)0.0210 (7)0.0186 (7)0.0055 (6)0.0058 (6)0.0033 (6)
C180.0147 (7)0.0158 (6)0.0160 (7)0.0048 (6)0.0036 (6)0.0025 (5)
C190.0190 (7)0.0180 (7)0.0163 (7)0.0034 (6)0.0066 (6)0.0034 (6)
C200.0190 (8)0.0252 (8)0.0249 (8)0.0007 (6)−0.0027 (6)−0.0001 (6)
C210.0211 (8)0.0247 (8)0.0265 (8)0.0003 (6)0.0034 (7)−0.0017 (6)
C220.0145 (7)0.0168 (6)0.0142 (7)0.0029 (6)0.0014 (6)0.0024 (5)
C230.0183 (7)0.0142 (6)0.0146 (7)0.0018 (6)0.0054 (6)0.0025 (5)
C240.0182 (7)0.0228 (7)0.0184 (7)0.0070 (6)0.0045 (6)0.0045 (6)
C250.0246 (8)0.0233 (7)0.0152 (7)0.0051 (6)0.0029 (6)0.0046 (6)
C260.0301 (8)0.0217 (7)0.0147 (7)0.0002 (6)0.0109 (6)−0.0005 (6)
C270.0204 (8)0.0211 (7)0.0265 (8)0.0066 (6)0.0092 (6)0.0017 (6)
C280.0203 (8)0.0179 (7)0.0187 (7)0.0042 (6)0.0031 (6)0.0031 (6)
O90.0231 (6)0.0241 (6)0.0235 (6)0.0053 (5)0.0048 (5)0.0044 (4)
O100.0423 (7)0.0230 (6)0.0188 (6)0.0127 (5)0.0053 (5)0.0031 (5)
F1—C31.3408 (15)C7—H7B0.9800
F2—C31.3395 (15)C7—H7C0.9800
F3—C31.3405 (15)C8—C91.5159 (17)
F4—C121.3671 (15)C8—H81.0000
F5—C171.3378 (15)C9—C101.3896 (17)
F6—C171.3464 (14)C9—C141.3897 (18)
F7—C171.3388 (14)C10—C111.3898 (18)
F8—C261.3641 (14)C10—H100.9500
O1—C11.2480 (15)C11—C121.3666 (19)
O2—C21.4019 (15)C11—H110.9500
O2—H20.889 (15)C12—C131.374 (2)
O3—C51.2039 (15)C13—C141.3871 (18)
O4—C51.3328 (15)C13—H130.9500
O4—C61.4600 (15)C14—H140.9500
O5—C151.2419 (15)C16—C171.5356 (18)
O6—C161.4001 (15)C16—C181.5474 (17)
O6—H60.893 (16)C18—C191.5173 (18)
O7—C191.2072 (15)C18—C221.5424 (17)
O8—C191.3395 (15)C18—H181.0000
O8—C201.4615 (16)C20—C211.5066 (18)
N1—C11.3690 (16)C20—H20A0.9900
N1—C21.4418 (16)C20—H20B0.9900
N1—H1A0.828 (14)C21—H21A0.9800
N2—C11.3377 (16)C21—H21B0.9800
N2—C81.4614 (16)C21—H21C0.9800
N2—H2A0.906 (14)C22—C231.5146 (17)
N3—C151.3697 (16)C22—H221.0000
N3—C161.4424 (17)C23—C241.3923 (17)
N3—H3A0.823 (14)C23—C281.3981 (18)
N4—C151.3390 (16)C24—C251.3890 (17)
N4—C221.4610 (16)C24—H240.9500
N4—H4A0.904 (14)C25—C261.3671 (19)
C2—C31.5380 (18)C25—H250.9500
C2—C41.5405 (17)C26—C271.3769 (18)
C4—C51.5194 (17)C27—C281.3894 (18)
C4—C81.5416 (17)C27—H270.9500
C4—H41.0000C28—H280.9500
C6—C71.5114 (18)O9—H9A0.91 (2)
C6—H6A0.9900O9—H9B0.80 (2)
C6—H6B0.9900O10—H10A0.861 (17)
C7—H7A0.9800O10—H10B0.82 (2)
C2—O2—H2109.7 (10)F4—C12—C13118.48 (13)
C5—O4—C6116.13 (10)C12—C13—C14117.91 (13)
C16—O6—H6107.7 (10)C12—C13—H13121.0
C19—O8—C20115.41 (10)C14—C13—H13121.0
C1—N1—C2124.52 (12)C13—C14—C9121.27 (13)
C1—N1—H1A114.5 (10)C13—C14—H14119.4
C2—N1—H1A117.6 (10)C9—C14—H14119.4
C1—N2—C8124.97 (11)O5—C15—N4123.03 (12)
C1—N2—H2A116.4 (9)O5—C15—N3119.63 (12)
C8—N2—H2A117.0 (9)N4—C15—N3117.30 (12)
C15—N3—C16123.46 (11)O6—C16—N3113.49 (10)
C15—N3—H3A113.1 (11)O6—C16—C17109.05 (10)
C16—N3—H3A115.5 (11)N3—C16—C17105.57 (10)
C15—N4—C22125.04 (11)O6—C16—C18109.01 (10)
C15—N4—H4A113.9 (9)N3—C16—C18108.46 (10)
C22—N4—H4A120.5 (9)C17—C16—C18111.26 (11)
O1—C1—N2121.75 (12)F5—C17—F7107.47 (10)
O1—C1—N1120.47 (12)F5—C17—F6107.27 (10)
N2—C1—N1117.75 (12)F7—C17—F6107.20 (10)
O2—C2—N1114.18 (11)F5—C17—C16112.27 (11)
O2—C2—C3108.30 (10)F7—C17—C16111.87 (11)
N1—C2—C3106.15 (11)F6—C17—C16110.49 (11)
O2—C2—C4108.86 (10)C19—C18—C22110.15 (10)
N1—C2—C4108.53 (10)C19—C18—C16111.83 (10)
C3—C2—C4110.82 (11)C22—C18—C16107.50 (10)
F2—C3—F3107.29 (11)C19—C18—H18109.1
F2—C3—F1106.81 (11)C22—C18—H18109.1
F3—C3—F1107.09 (10)C16—C18—H18109.1
F2—C3—C2112.82 (11)O7—C19—O8123.52 (12)
F3—C3—C2111.21 (11)O7—C19—C18125.21 (12)
F1—C3—C2111.32 (11)O8—C19—C18111.27 (11)
C5—C4—C2114.01 (10)O8—C20—C21107.16 (11)
C5—C4—C8109.05 (11)O8—C20—H20A110.3
C2—C4—C8108.95 (10)C21—C20—H20A110.3
C5—C4—H4108.2O8—C20—H20B110.3
C2—C4—H4108.2C21—C20—H20B110.3
C8—C4—H4108.2H20A—C20—H20B108.5
O3—C5—O4124.46 (12)C20—C21—H21A109.5
O3—C5—C4125.69 (12)C20—C21—H21B109.5
O4—C5—C4109.81 (11)H21A—C21—H21B109.5
O4—C6—C7110.18 (11)C20—C21—H21C109.5
O4—C6—H6A109.6H21A—C21—H21C109.5
C7—C6—H6A109.6H21B—C21—H21C109.5
O4—C6—H6B109.6N4—C22—C23109.79 (11)
C7—C6—H6B109.6N4—C22—C18107.87 (10)
H6A—C6—H6B108.1C23—C22—C18114.33 (10)
C6—C7—H7A109.5N4—C22—H22108.2
C6—C7—H7B109.5C23—C22—H22108.2
H7A—C7—H7B109.5C18—C22—H22108.2
C6—C7—H7C109.5C24—C23—C28118.56 (12)
H7A—C7—H7C109.5C24—C23—C22120.04 (11)
H7B—C7—H7C109.5C28—C23—C22121.35 (11)
N2—C8—C9109.11 (10)C25—C24—C23121.33 (12)
N2—C8—C4107.61 (10)C25—C24—H24119.3
C9—C8—C4112.55 (10)C23—C24—H24119.3
N2—C8—H8109.2C26—C25—C24117.96 (12)
C9—C8—H8109.2C26—C25—H25121.0
C4—C8—H8109.2C24—C25—H25121.0
C10—C9—C14118.47 (13)F8—C26—C25118.52 (12)
C10—C9—C8120.19 (12)F8—C26—C27118.24 (12)
C14—C9—C8121.31 (12)C25—C26—C27123.24 (13)
C9—C10—C11121.14 (13)C26—C27—C28118.16 (13)
C9—C10—H10119.4C26—C27—H27120.9
C11—C10—H10119.4C28—C27—H27120.9
C12—C11—C10118.08 (13)C27—C28—C23120.75 (12)
C12—C11—H11121.0C27—C28—H28119.6
C10—C11—H11121.0C23—C28—H28119.6
C11—C12—F4118.40 (13)H9A—O9—H9B114.7 (18)
C11—C12—C13123.12 (13)H10A—O10—H10B110.6 (17)
C8—N2—C1—O1−175.03 (12)C22—N4—C15—O5−170.31 (12)
C8—N2—C1—N17.05 (19)C22—N4—C15—N312.12 (18)
C2—N1—C1—O1176.03 (12)C16—N3—C15—O5168.82 (11)
C2—N1—C1—N2−6.03 (19)C16—N3—C15—N4−13.53 (18)
C1—N1—C2—O2−90.65 (15)C15—N3—C16—O6−83.84 (15)
C1—N1—C2—C3150.12 (12)C15—N3—C16—C17156.78 (12)
C1—N1—C2—C430.96 (17)C15—N3—C16—C1837.46 (16)
O2—C2—C3—F2174.10 (10)O6—C16—C17—F557.31 (14)
N1—C2—C3—F2−62.89 (14)N3—C16—C17—F5179.58 (10)
C4—C2—C3—F254.76 (14)C18—C16—C17—F5−62.96 (14)
O2—C2—C3—F3−65.29 (13)O6—C16—C17—F7178.24 (10)
N1—C2—C3—F357.72 (14)N3—C16—C17—F7−59.49 (13)
C4—C2—C3—F3175.37 (10)C18—C16—C17—F757.97 (14)
O2—C2—C3—F154.03 (14)O6—C16—C17—F6−62.40 (13)
N1—C2—C3—F1177.05 (11)N3—C16—C17—F659.87 (13)
C4—C2—C3—F1−65.30 (14)C18—C16—C17—F6177.33 (10)
O2—C2—C4—C5−51.86 (14)O6—C16—C18—C19−54.09 (13)
N1—C2—C4—C5−176.67 (10)N3—C16—C18—C19−178.11 (10)
C3—C2—C4—C567.14 (14)C17—C16—C18—C1966.20 (14)
O2—C2—C4—C870.19 (12)O6—C16—C18—C2266.94 (13)
N1—C2—C4—C8−54.63 (14)N3—C16—C18—C22−57.08 (13)
C3—C2—C4—C8−170.82 (11)C17—C16—C18—C22−172.77 (10)
C6—O4—C5—O3−1.83 (18)C20—O8—C19—O7−2.87 (18)
C6—O4—C5—C4−179.41 (10)C20—O8—C19—C18177.89 (10)
C2—C4—C5—O369.04 (17)C22—C18—C19—O7−49.13 (17)
C8—C4—C5—O3−52.95 (17)C16—C18—C19—O770.36 (16)
C2—C4—C5—O4−113.42 (12)C22—C18—C19—O8130.10 (11)
C8—C4—C5—O4124.58 (11)C16—C18—C19—O8−110.42 (12)
C5—O4—C6—C7−84.19 (14)C19—O8—C20—C21−175.59 (11)
C1—N2—C8—C9−155.05 (12)C15—N4—C22—C23−159.94 (12)
C1—N2—C8—C4−32.65 (17)C15—N4—C22—C18−34.77 (16)
C5—C4—C8—N2180.00 (10)C19—C18—C22—N4177.29 (10)
C2—C4—C8—N255.00 (13)C16—C18—C22—N455.21 (13)
C5—C4—C8—C9−59.74 (14)C19—C18—C22—C23−60.28 (14)
C2—C4—C8—C9175.25 (11)C16—C18—C22—C23177.64 (10)
N2—C8—C9—C10−116.25 (13)N4—C22—C23—C24−143.56 (12)
C4—C8—C9—C10124.37 (12)C18—C22—C23—C2495.07 (14)
N2—C8—C9—C1461.58 (15)N4—C22—C23—C2833.85 (16)
C4—C8—C9—C14−57.80 (15)C18—C22—C23—C28−87.53 (15)
C14—C9—C10—C11−0.64 (18)C28—C23—C24—C250.19 (19)
C8—C9—C10—C11177.25 (11)C22—C23—C24—C25177.67 (12)
C9—C10—C11—C121.40 (19)C23—C24—C25—C26−0.9 (2)
C10—C11—C12—F4178.09 (11)C24—C25—C26—F8−178.72 (11)
C10—C11—C12—C13−1.1 (2)C24—C25—C26—C271.0 (2)
C11—C12—C13—C140.1 (2)F8—C26—C27—C28179.41 (11)
F4—C12—C13—C14−179.12 (11)C25—C26—C27—C28−0.3 (2)
C12—C13—C14—C90.7 (2)C26—C27—C28—C23−0.5 (2)
C10—C9—C14—C13−0.43 (19)C24—C23—C28—C270.53 (19)
C8—C9—C14—C13−178.30 (12)C22—C23—C28—C27−176.91 (12)
D—H···AD—HH···AD···AD—H···A
O2—H2···O9i0.889 (15)1.860 (16)2.7482 (14)176.2 (15)
O9—H9A···O3ii0.91 (2)1.90 (2)2.8026 (15)169.8 (18)
O6—H6···O10iii0.893 (16)1.788 (16)2.6770 (14)173.5 (15)
N3—H3A···O10iii0.823 (14)2.583 (15)3.0737 (16)119.6 (12)
N4—H4A···O5iii0.904 (14)1.900 (15)2.8010 (14)174.8 (13)
N1—H1A···O1iv0.828 (14)2.109 (14)2.9235 (15)167.9 (13)
N2—H2A···O5v0.906 (14)1.958 (15)2.8395 (14)163.8 (13)
O9—H9B···O1vi0.80 (2)2.00 (2)2.7443 (15)155 (2)
O10—H10A···O9vii0.861 (17)1.925 (17)2.7833 (15)175.4 (16)
O10—H10B···O7viii0.82 (2)2.07 (2)2.8685 (14)166 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O9i0.889 (15)1.860 (16)2.7482 (14)176.2 (15)
O9—H9A⋯O3ii0.91 (2)1.90 (2)2.8026 (15)169.8 (18)
O6—H6⋯O10iii0.893 (16)1.788 (16)2.6770 (14)173.5 (15)
N3—H3A⋯O10iii0.823 (14)2.583 (15)3.0737 (16)119.6 (12)
N4—H4A⋯O5iii0.904 (14)1.900 (15)2.8010 (14)174.8 (13)
N1—H1A⋯O1iv0.828 (14)2.109 (14)2.9235 (15)167.9 (13)
N2—H2A⋯O5v0.906 (14)1.958 (15)2.8395 (14)163.8 (13)
O9—H9B⋯O1vi0.80 (2)2.00 (2)2.7443 (15)155 (2)
O10—H10A⋯O9vii0.861 (17)1.925 (17)2.7833 (15)175.4 (16)
O10—H10B⋯O7viii0.82 (2)2.07 (2)2.8685 (14)166 (2)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

  5 in total

1.  Synthesis of 4-aryl-3,4-dihydropyrimidin-2(1H)-thione derivatives as potential calcium channel blockers.

Authors:  Inci Selin Zorkun; Selma Saraç; Semra Celebi; Kevser Erol
Journal:  Bioorg Med Chem       Date:  2006-09-12       Impact factor: 3.641

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Monastrol inhibition of the mitotic kinesin Eg5.

Authors:  Jared C Cochran; Joseph E Gatial; Tarun M Kapoor; Susan P Gilbert
Journal:  J Biol Chem       Date:  2005-01-23       Impact factor: 5.157

4.  Identification of the protein binding region of S-trityl-L-cysteine, a new potent inhibitor of the mitotic kinesin Eg5.

Authors:  Sébastien Brier; David Lemaire; Salvatore Debonis; Eric Forest; Frank Kozielski
Journal:  Biochemistry       Date:  2004-10-19       Impact factor: 3.162

5.  Ethyl 6-[4-(dimethyl-amino)phen-yl]-4-hydr-oxy-2-oxo-4-(trifluoro-methyl)-hexa-hydro-pyrimidine-5-carboxyl-ate.

Authors:  Xiao-Ping Song; Gong-Chun Li; Chang-Zeng Wu; Feng-Ling Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-14
  5 in total
  3 in total

1.  Ethyl 6-(4-fluoro-phen-yl)-4-hy-droxy-2-sulfanyl-idene-4-trifluoro-methyl-1,3-diazinane-5-carboxyl-ate.

Authors:  Bao-Jun Huang; Lei Zhu; Qin He
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-29

2.  Crystal structure of ethyl 6-(2-fluoro-phen-yl)-4-hy-droxy-2-sulfanyl-idene-4-tri-fluoro-meth-yl-1,3-diazinane-5-carboxyl-ate.

Authors:  M S Krishnamurthy; Noor Shahina Begum
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-02

3.  rac-Ethyl 4-hy-droxy-4-trifluoro-methyl-6-(2,4,5-trimeth-oxy-phen-yl)-2-thio-1,3-diazinane-5-carboxyl-ate.

Authors:  Yong-Qiang Li; Zhi-Yu Ju
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-10
  3 in total

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