| Literature DB >> 21837091 |
Shou-Wen Jin1, Bing-Xia Chen, Yu-Shuang Ge, Hua-Bing Yin, Yu-Ping Fang.
Abstract
The title compound, H(3)O(+)·C(6)H(2)N(3)O(7) (-), consists of one picrate anion and one oxonium cation. The oxonium cation is located on a crystallographic twofold axis and both its H atoms are disordered, each over two symmetry-equivalent positions with occupancy ratios of 0.75. The picrate anions are also located on twofold axes bis-ecting the phenolate and p-nitro groups. π-π inter-actions between the rings of the picrates [centroid-to-centroid distances of 3.324 (2) Å] connect the anions to form stacks along the a-axis direction. The stacks are further joined together by the protonated water mol-ecules through hydrogen bonds to form two-dimensional sheets extending parallel to the ab plane. The sheets are stacked on top of each other along the c-axis direction and connected through C-H⋯O inter-actions between the CH groups of the benzene rings and the picrate nitro groups, with C⋯O distances of 3.450 (2) Å.Entities:
Year: 2011 PMID: 21837091 PMCID: PMC3151795 DOI: 10.1107/S1600536811022574
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| H3O+·C6H2N3O7− | |
| Mo | |
| Orthorhombic, | Cell parameters from 1867 reflections |
| θ = 1.5–25.0° | |
| µ = 0.16 mm−1 | |
| Block, yellow | |
| 0.45 × 0.34 × 0.31 mm | |
| Bruker SMART CCD area-detector diffractometer | 848 independent reflections |
| Radiation source: fine-focus sealed tube | 654 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 3842 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 848 reflections | Δρmax = 0.21 e Å−3 |
| 89 parameters | Δρmin = −0.41 e Å−3 |
| 2 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.039 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.3838 (3) | 0.11353 (11) | 0.17214 (16) | 0.0328 (7) | |
| N2 | 0.2500 | −0.09568 (15) | 0.0000 | 0.0361 (8) | |
| O1 | 0.2500 | 0.18513 (12) | 0.0000 | 0.0369 (8) | |
| O2 | 0.3327 (3) | 0.17048 (10) | 0.19325 (15) | 0.0502 (7) | |
| O3 | 0.4947 (3) | 0.08131 (11) | 0.22328 (15) | 0.0497 (7) | |
| O4 | 0.3100 (4) | −0.12491 (10) | 0.07276 (19) | 0.0630 (8) | |
| O5 | 0.0000 | 0.2500 | 0.1338 (2) | 0.0489 (9) | |
| H5A | 0.089 (6) | 0.233 (3) | 0.091 (3) | 0.073* | 0.75 |
| H5B | 0.052 (7) | 0.279 (2) | 0.177 (3) | 0.073* | 0.75 |
| C1 | 0.2500 | 0.12179 (17) | 0.0000 | 0.0270 (8) | |
| C2 | 0.3107 (4) | 0.08102 (13) | 0.08289 (17) | 0.0270 (7) | |
| C3 | 0.3134 (4) | 0.01147 (13) | 0.08305 (17) | 0.0286 (7) | |
| H3 | 0.3569 | −0.0122 | 0.1378 | 0.034* | |
| C4 | 0.2500 | −0.02233 (17) | 0.0000 | 0.0282 (8) |
| N1 | 0.0376 (14) | 0.0358 (13) | 0.0250 (12) | −0.0067 (10) | −0.0014 (10) | 0.0001 (9) |
| N2 | 0.0350 (19) | 0.0269 (16) | 0.046 (2) | 0.000 | 0.0059 (15) | 0.000 |
| O1 | 0.0587 (19) | 0.0226 (13) | 0.0295 (14) | 0.000 | 0.0085 (13) | 0.000 |
| O2 | 0.0748 (17) | 0.0372 (12) | 0.0387 (12) | 0.0047 (10) | −0.0128 (11) | −0.0126 (9) |
| O3 | 0.0569 (15) | 0.0538 (13) | 0.0385 (12) | 0.0006 (11) | −0.0193 (10) | 0.0019 (9) |
| O4 | 0.096 (2) | 0.0300 (12) | 0.0629 (15) | 0.0117 (11) | −0.0140 (14) | 0.0089 (10) |
| O5 | 0.061 (2) | 0.0414 (17) | 0.0443 (18) | −0.0008 (15) | 0.000 | 0.000 |
| C1 | 0.0273 (19) | 0.0275 (18) | 0.0260 (18) | 0.000 | 0.0050 (14) | 0.000 |
| C2 | 0.0287 (14) | 0.0305 (14) | 0.0217 (13) | −0.0032 (10) | 0.0009 (10) | −0.0014 (9) |
| C3 | 0.0279 (14) | 0.0303 (14) | 0.0275 (13) | 0.0010 (11) | −0.0001 (11) | 0.0051 (10) |
| C4 | 0.0262 (19) | 0.0248 (17) | 0.0337 (19) | 0.000 | 0.0041 (15) | 0.000 |
| N1—O2 | 1.220 (3) | O5—H5B | 0.91 (2) |
| N1—O3 | 1.230 (3) | C1—C2 | 1.447 (3) |
| N1—C2 | 1.463 (3) | C1—C2i | 1.447 (3) |
| N2—O4 | 1.219 (3) | C2—C3 | 1.378 (4) |
| N2—O4i | 1.219 (3) | C3—C4 | 1.383 (3) |
| N2—C4 | 1.453 (5) | C3—H3 | 0.9300 |
| O1—C1 | 1.255 (4) | C4—C3i | 1.383 (3) |
| O5—H5A | 0.92 (2) | ||
| O2—N1—O3 | 122.8 (2) | C3—C2—C1 | 124.3 (2) |
| O2—N1—C2 | 119.5 (2) | C3—C2—N1 | 115.7 (2) |
| O3—N1—C2 | 117.7 (2) | C1—C2—N1 | 119.9 (2) |
| O4—N2—O4i | 123.3 (3) | C2—C3—C4 | 118.6 (2) |
| O4—N2—C4 | 118.37 (17) | C2—C3—H3 | 120.7 |
| O4i—N2—C4 | 118.37 (17) | C4—C3—H3 | 120.7 |
| H5A—O5—H5B | 111 (5) | C3i—C4—C3 | 122.1 (3) |
| O1—C1—C2 | 123.92 (15) | C3i—C4—N2 | 118.97 (16) |
| O1—C1—C2i | 123.92 (15) | C3—C4—N2 | 118.97 (16) |
| C2—C1—C2i | 112.2 (3) | ||
| O1—C1—C2—C3 | −179.13 (18) | C1—C2—C3—C4 | −1.7 (3) |
| C2i—C1—C2—C3 | 0.87 (18) | N1—C2—C3—C4 | −178.59 (19) |
| O1—C1—C2—N1 | −2.4 (3) | C2—C3—C4—C3i | 0.81 (17) |
| C2i—C1—C2—N1 | 177.6 (3) | C2—C3—C4—N2 | −179.19 (17) |
| O2—N1—C2—C3 | −155.8 (3) | O4—N2—C4—C3i | 178.42 (19) |
| O3—N1—C2—C3 | 23.8 (3) | O4i—N2—C4—C3i | −1.58 (19) |
| O2—N1—C2—C1 | 27.2 (3) | O4—N2—C4—C3 | −1.58 (19) |
| O3—N1—C2—C1 | −153.3 (2) | O4i—N2—C4—C3 | 178.42 (19) |
| H··· | ||||
| O5—H5B···O2ii | 0.91 (2) | 2.17 (2) | 3.061 (3) | 166 (5) |
| O5—H5A···O1 | 0.92 (2) | 1.93 (2) | 2.848 (2) | 172 (5) |
| C3—H3···O3iii | 0.93 | 2.52 | 3.450 (2) | 175 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.91 (2) | 2.17 (2) | 3.061 (3) | 166 (5) |
| O5—H5 | 0.92 (2) | 1.93 (2) | 2.848 (2) | 172 (5) |
| C3—H3⋯O3ii | 0.93 | 2.52 | 3.450 (2) | 175 |
Symmetry codes: (i) ; (ii) .