| Literature DB >> 21837047 |
R Archana, K Prabakaran, K J Rajendra Prasad, A Thiruvalluvar, R J Butcher.
Abstract
In the title mol-ecule, C(13)H(13)NS, the dihedral angle between the benzene ring and the fused pyrrole ring is 0.71 (8)° and the cyclo-hexene ring is in an envelope form. The (CH(2))(3) atoms of the cyclo-hexene ring are disordered over two positions; the site-occupancy factor for the major component refined to 0.862 (4). In the crystal, inter-molecular N-H⋯S hydrogen bonds lead to the formation of centrosymmetric aggregates via an R(2) (2)(10) ring.Entities:
Year: 2011 PMID: 21837047 PMCID: PMC3151814 DOI: 10.1107/S1600536811019246
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H13NS | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 356 K |
| Cu | |
| Cell parameters from 2595 reflections | |
| θ = 5.3–72.6° | |
| α = 115.009 (7)° | µ = 2.31 mm−1 |
| β = 104.901 (6)° | |
| γ = 98.074 (6)° | Chunk, orange |
| 0.46 × 0.28 × 0.21 mm |
| Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2102 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 1924 reflections with |
| graphite | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 72.8°, θmin = 5.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 3471 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2102 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.33 e Å−3 |
| 3 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 1.12016 (7) | 0.28362 (5) | 0.07548 (6) | 0.0567 (1) | |
| N9 | 0.79545 (19) | 0.08614 (14) | 0.14611 (15) | 0.0412 (3) | |
| C1 | 0.9615 (3) | 0.34787 (18) | 0.16910 (19) | 0.0438 (4) | |
| C2A | 0.9571 (3) | 0.5227 (2) | 0.2371 (3) | 0.0611 (6) | 0.862 (4) |
| C3A | 0.7579 (4) | 0.5495 (2) | 0.2548 (3) | 0.0590 (7) | 0.862 (4) |
| C4A | 0.6807 (3) | 0.47256 (19) | 0.3468 (2) | 0.0531 (5) | 0.862 (4) |
| C4C | 0.6904 (3) | 0.30147 (17) | 0.27848 (18) | 0.0421 (4) | |
| C4D | 0.5783 (2) | 0.16637 (17) | 0.27860 (17) | 0.0396 (4) | |
| C5 | 0.4231 (3) | 0.14228 (19) | 0.33927 (19) | 0.0443 (4) | |
| C6 | 0.3399 (2) | −0.00860 (19) | 0.31681 (18) | 0.0430 (4) | |
| C7 | 0.4130 (2) | −0.13824 (18) | 0.23121 (19) | 0.0444 (4) | |
| C8 | 0.5640 (2) | −0.12039 (18) | 0.16959 (19) | 0.0426 (4) | |
| C8A | 0.6473 (2) | 0.03337 (17) | 0.19299 (17) | 0.0382 (4) | |
| C9A | 0.8222 (2) | 0.24863 (17) | 0.19625 (18) | 0.0406 (4) | |
| C16 | 0.1720 (3) | −0.0386 (2) | 0.3790 (2) | 0.0530 (5) | |
| C4B | 0.6807 (3) | 0.47256 (19) | 0.3468 (2) | 0.0531 (5) | 0.138 (4) |
| C3B | 0.855 (2) | 0.5809 (14) | 0.3534 (18) | 0.0590 (7) | 0.138 (4) |
| C2B | 0.9571 (3) | 0.5227 (2) | 0.2371 (3) | 0.0611 (6) | 0.138 (4) |
| H3A | 0.65603 | 0.50556 | 0.14672 | 0.0708* | 0.862 (4) |
| H2B | 0.98737 | 0.56293 | 0.16579 | 0.0733* | 0.862 (4) |
| H4B | 0.54131 | 0.47484 | 0.33584 | 0.0637* | 0.862 (4) |
| H3B | 0.77491 | 0.66471 | 0.31193 | 0.0708* | 0.862 (4) |
| H4A | 0.76376 | 0.53281 | 0.46218 | 0.0637* | 0.862 (4) |
| H8 | 0.60931 | −0.20752 | 0.11426 | 0.0512* | |
| H9 | 0.856 (3) | 0.029 (3) | 0.086 (2) | 0.050 (5)* | |
| H16A | 0.14149 | 0.06091 | 0.43500 | 0.0795* | |
| H16B | 0.21516 | −0.08010 | 0.45319 | 0.0795* | |
| H16C | 0.05241 | −0.11568 | 0.28852 | 0.0795* | |
| H5 | 0.37662 | 0.22852 | 0.39473 | 0.0531* | |
| H7 | 0.35612 | −0.24001 | 0.21612 | 0.0532* | |
| H2A | 1.06434 | 0.58601 | 0.34358 | 0.0733* | 0.862 (4) |
| H2C | 1.09697 | 0.59042 | 0.28888 | 0.0733* | 0.138 (4) |
| H2D | 0.89345 | 0.53906 | 0.14537 | 0.0733* | 0.138 (4) |
| H3C | 0.80970 | 0.66932 | 0.34463 | 0.0708* | 0.138 (4) |
| H3D | 0.95675 | 0.62673 | 0.46174 | 0.0708* | 0.138 (4) |
| H4C | 0.55597 | 0.47686 | 0.27954 | 0.0637* | 0.138 (4) |
| H4D | 0.67683 | 0.50937 | 0.45626 | 0.0637* | 0.138 (4) |
| S1 | 0.0577 (2) | 0.0544 (2) | 0.0691 (3) | 0.0166 (2) | 0.0349 (2) | 0.0319 (2) |
| N9 | 0.0486 (6) | 0.0350 (6) | 0.0475 (6) | 0.0156 (5) | 0.0246 (5) | 0.0209 (5) |
| C1 | 0.0476 (8) | 0.0392 (7) | 0.0458 (7) | 0.0084 (6) | 0.0155 (6) | 0.0232 (6) |
| C2A | 0.0759 (11) | 0.0386 (8) | 0.0776 (11) | 0.0143 (8) | 0.0367 (9) | 0.0307 (7) |
| C3A | 0.0760 (14) | 0.0372 (8) | 0.0728 (13) | 0.0214 (9) | 0.0301 (11) | 0.0304 (9) |
| C4A | 0.0659 (10) | 0.0342 (7) | 0.0616 (9) | 0.0190 (7) | 0.0300 (8) | 0.0194 (6) |
| C4C | 0.0506 (8) | 0.0340 (7) | 0.0432 (7) | 0.0125 (6) | 0.0184 (6) | 0.0187 (5) |
| C4D | 0.0474 (7) | 0.0338 (6) | 0.0402 (6) | 0.0132 (5) | 0.0179 (6) | 0.0180 (5) |
| C5 | 0.0517 (8) | 0.0407 (7) | 0.0453 (7) | 0.0181 (6) | 0.0239 (6) | 0.0194 (6) |
| C6 | 0.0440 (7) | 0.0451 (7) | 0.0416 (7) | 0.0113 (6) | 0.0178 (6) | 0.0211 (6) |
| C7 | 0.0493 (8) | 0.0363 (7) | 0.0497 (7) | 0.0093 (6) | 0.0188 (6) | 0.0226 (6) |
| C8 | 0.0504 (8) | 0.0342 (6) | 0.0468 (7) | 0.0147 (6) | 0.0206 (6) | 0.0197 (5) |
| C8A | 0.0439 (7) | 0.0347 (6) | 0.0389 (6) | 0.0132 (5) | 0.0167 (5) | 0.0183 (5) |
| C9A | 0.0481 (8) | 0.0339 (6) | 0.0426 (7) | 0.0119 (6) | 0.0174 (6) | 0.0200 (5) |
| C16 | 0.0521 (9) | 0.0552 (9) | 0.0545 (8) | 0.0109 (7) | 0.0256 (7) | 0.0262 (7) |
| C4B | 0.0659 (10) | 0.0342 (7) | 0.0616 (9) | 0.0190 (7) | 0.0300 (8) | 0.0194 (6) |
| C3B | 0.0760 (14) | 0.0372 (8) | 0.0728 (13) | 0.0214 (9) | 0.0301 (11) | 0.0304 (9) |
| C2B | 0.0759 (11) | 0.0386 (8) | 0.0776 (11) | 0.0143 (8) | 0.0367 (9) | 0.0307 (7) |
| S1—C1 | 1.643 (2) | C7—C8 | 1.374 (2) |
| N9—C8A | 1.359 (2) | C8—C8A | 1.398 (3) |
| N9—C9A | 1.380 (2) | C2A—H2A | 0.9700 |
| N9—H9 | 0.86 (2) | C2A—H2B | 0.9700 |
| C1—C9A | 1.420 (3) | C2B—H2C | 0.9700 |
| C1—C2B | 1.519 (3) | C2B—H2D | 0.9700 |
| C1—C2A | 1.519 (3) | C3A—H3A | 0.9700 |
| C2A—C3A | 1.508 (4) | C3A—H3B | 0.9700 |
| C2B—C3B | 1.446 (15) | C3B—H3C | 0.9700 |
| C3A—C4A | 1.520 (3) | C3B—H3D | 0.9700 |
| C3B—C4B | 1.463 (15) | C4A—H4A | 0.9700 |
| C4A—C4C | 1.498 (3) | C4A—H4B | 0.9700 |
| C4B—C4C | 1.498 (3) | C4B—H4D | 0.9700 |
| C4C—C4D | 1.415 (3) | C4B—H4C | 0.9700 |
| C4C—C9A | 1.389 (3) | C5—H5 | 0.9300 |
| C4D—C5 | 1.406 (3) | C7—H7 | 0.9300 |
| C4D—C8A | 1.422 (2) | C8—H8 | 0.9300 |
| C5—C6 | 1.376 (3) | C16—H16C | 0.9600 |
| C6—C16 | 1.507 (3) | C16—H16A | 0.9600 |
| C6—C7 | 1.419 (2) | C16—H16B | 0.9600 |
| C8A—N9—C9A | 108.73 (13) | H2A—C2A—H2B | 108.00 |
| C8A—N9—H9 | 127.5 (19) | C1—C2B—H2C | 108.00 |
| C9A—N9—H9 | 123.4 (19) | C1—C2B—H2D | 108.00 |
| S1—C1—C2B | 121.48 (16) | C3B—C2B—H2C | 108.00 |
| C2A—C1—C9A | 114.66 (17) | C3B—C2B—H2D | 108.00 |
| C2B—C1—C9A | 114.66 (17) | H2C—C2B—H2D | 107.00 |
| S1—C1—C2A | 121.48 (16) | C2A—C3A—H3B | 109.00 |
| S1—C1—C9A | 123.85 (14) | C4A—C3A—H3A | 109.00 |
| C1—C2A—C3A | 114.80 (19) | C2A—C3A—H3A | 109.00 |
| C1—C2B—C3B | 118.3 (6) | H3A—C3A—H3B | 108.00 |
| C2A—C3A—C4A | 113.5 (2) | C4A—C3A—H3B | 109.00 |
| C2B—C3B—C4B | 121.0 (10) | C2B—C3B—H3D | 107.00 |
| C3A—C4A—C4C | 109.36 (17) | C2B—C3B—H3C | 107.00 |
| C3B—C4B—C4C | 112.2 (6) | C4B—C3B—H3D | 107.00 |
| C4B—C4C—C9A | 122.29 (17) | H3C—C3B—H3D | 107.00 |
| C4B—C4C—C4D | 130.69 (18) | C4B—C3B—H3C | 107.00 |
| C4A—C4C—C4D | 130.69 (18) | C3A—C4A—H4A | 110.00 |
| C4A—C4C—C9A | 122.29 (17) | C3A—C4A—H4B | 110.00 |
| C4D—C4C—C9A | 107.01 (15) | H4A—C4A—H4B | 108.00 |
| C4C—C4D—C5 | 134.04 (17) | C4C—C4A—H4A | 110.00 |
| C4C—C4D—C8A | 106.52 (14) | C4C—C4A—H4B | 110.00 |
| C5—C4D—C8A | 119.43 (16) | C4C—C4B—H4D | 109.00 |
| C4D—C5—C6 | 120.16 (17) | H4C—C4B—H4D | 108.00 |
| C7—C6—C16 | 119.78 (17) | C3B—C4B—H4C | 109.00 |
| C5—C6—C16 | 121.41 (16) | C3B—C4B—H4D | 109.00 |
| C5—C6—C7 | 118.81 (16) | C4C—C4B—H4C | 109.00 |
| C6—C7—C8 | 123.03 (17) | C4D—C5—H5 | 120.00 |
| C7—C8—C8A | 117.67 (15) | C6—C5—H5 | 120.00 |
| N9—C8A—C4D | 108.52 (15) | C6—C7—H7 | 119.00 |
| N9—C8A—C8 | 130.59 (15) | C8—C7—H7 | 118.00 |
| C4D—C8A—C8 | 120.89 (14) | C7—C8—H8 | 121.00 |
| N9—C9A—C4C | 109.22 (15) | C8A—C8—H8 | 121.00 |
| C1—C9A—C4C | 124.73 (17) | C6—C16—H16A | 109.00 |
| N9—C9A—C1 | 126.04 (15) | C6—C16—H16B | 109.00 |
| C1—C2A—H2A | 109.00 | C6—C16—H16C | 109.00 |
| C1—C2A—H2B | 109.00 | H16A—C16—H16B | 109.00 |
| C3A—C2A—H2A | 109.00 | H16A—C16—H16C | 109.00 |
| C3A—C2A—H2B | 109.00 | H16B—C16—H16C | 109.00 |
| C9A—N9—C8A—C4D | −1.01 (16) | C4A—C4C—C9A—N9 | −179.30 (14) |
| C9A—N9—C8A—C8 | 179.17 (15) | C4A—C4C—C9A—C1 | 0.7 (3) |
| C8A—N9—C9A—C1 | −179.28 (15) | C4D—C4C—C9A—N9 | −0.11 (17) |
| C8A—N9—C9A—C4C | 0.70 (17) | C4D—C4C—C9A—C1 | 179.87 (15) |
| S1—C1—C2A—C3A | 155.86 (17) | C4C—C4D—C5—C6 | 178.74 (17) |
| C9A—C1—C2A—C3A | −25.3 (3) | C8A—C4D—C5—C6 | 0.4 (2) |
| S1—C1—C9A—N9 | −1.7 (2) | C4C—C4D—C8A—N9 | 0.93 (17) |
| S1—C1—C9A—C4C | 178.38 (13) | C4C—C4D—C8A—C8 | −179.22 (14) |
| C2A—C1—C9A—N9 | 179.56 (16) | C5—C4D—C8A—N9 | 179.65 (14) |
| C2A—C1—C9A—C4C | −0.4 (2) | C5—C4D—C8A—C8 | −0.5 (2) |
| C1—C2A—C3A—C4A | 51.1 (3) | C4D—C5—C6—C7 | −0.3 (2) |
| C2A—C3A—C4A—C4C | −48.2 (2) | C4D—C5—C6—C16 | −179.42 (15) |
| C3A—C4A—C4C—C4D | −155.34 (19) | C5—C6—C7—C8 | 0.2 (2) |
| C3A—C4A—C4C—C9A | 23.7 (2) | C16—C6—C7—C8 | 179.32 (15) |
| C4A—C4C—C4D—C5 | 0.2 (3) | C6—C7—C8—C8A | −0.2 (2) |
| C4A—C4C—C4D—C8A | 178.61 (16) | C7—C8—C8A—N9 | −179.81 (15) |
| C9A—C4C—C4D—C5 | −178.95 (17) | C7—C8—C8A—C4D | 0.4 (2) |
| C9A—C4C—C4D—C8A | −0.50 (17) |
| H··· | ||||
| N9—H9···S1i | 0.86 (2) | 2.77 (3) | 3.4955 (15) | 143 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N9—H9⋯S1i | 0.86 (2) | 2.77 (3) | 3.4955 (15) | 143 (2) |
Symmetry code: (i) .