| Literature DB >> 21837046 |
Xu-Feng Liu, Xiao-Yong Yu, Shao-Liang Jiang.
Abstract
The title compound, C(8)H(9)N(3)S, is almost planar (r.m.s. deviation = 0.019 Å) apart from the terminal -NH(2) grouping [deviation of the N atom = 0.286 (2) Å]. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds, generating (001) sheets.Entities:
Year: 2011 PMID: 21837046 PMCID: PMC3152062 DOI: 10.1107/S1600536811020149
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H9N3S | |
| Monoclinic, | Mo |
| Cell parameters from 1356 reflections | |
| θ = 2.9–27.9° | |
| µ = 0.34 mm−1 | |
| β = 93.416 (13)° | |
| Prism, colorless | |
| 0.28 × 0.18 × 0.10 mm |
| Rigaku Saturn CCD area-detector diffractometer | 1864 independent reflections |
| Radiation source: rotating anode | 1614 reflections with |
| multilayer | |
| Detector resolution: 14.63 pixels mm-1 | θmax = 27.9°, θmin = 1.4° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 4186 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 1864 reflections | Δρmax = 0.28 e Å−3 |
| 122 parameters | Δρmin = −0.20 e Å−3 |
| 5 restraints | Absolute structure: Flack (1983), 836 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.09 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.74281 (13) | 0.41481 (6) | 0.33097 (3) | 0.01462 (12) | |
| C5 | 0.2809 (5) | 0.8047 (3) | 0.18122 (14) | 0.0144 (5) | |
| N3 | 0.9465 (5) | 0.4807 (2) | 0.52579 (12) | 0.0163 (4) | |
| C2 | 0.5274 (5) | 0.4513 (3) | 0.13713 (13) | 0.0163 (5) | |
| H2A | 0.6107 | 0.3333 | 0.1221 | 0.020* | |
| N1 | 0.4899 (4) | 0.7443 (2) | 0.34709 (11) | 0.0136 (4) | |
| C4 | 0.2524 (5) | 0.7352 (3) | 0.08962 (14) | 0.0158 (5) | |
| H4 | 0.1480 | 0.8083 | 0.0403 | 0.019* | |
| C6 | 0.4388 (5) | 0.6942 (3) | 0.25178 (13) | 0.0127 (4) | |
| C7 | 0.6412 (5) | 0.6127 (3) | 0.39382 (13) | 0.0130 (4) | |
| N2 | 0.7110 (4) | 0.6159 (2) | 0.49033 (12) | 0.0150 (4) | |
| C3 | 0.3711 (5) | 0.5633 (3) | 0.06809 (13) | 0.0185 (5) | |
| H3 | 0.3451 | 0.5208 | 0.0046 | 0.022* | |
| C1 | 0.5572 (5) | 0.5186 (3) | 0.22906 (13) | 0.0124 (4) | |
| C8 | 0.1482 (5) | 0.9932 (3) | 0.20484 (14) | 0.0182 (5) | |
| H8A | 0.3296 | 1.0618 | 0.2404 | 0.027* | |
| H8B | −0.0518 | 0.9812 | 0.2433 | 0.027* | |
| H8C | 0.0810 | 1.0585 | 0.1461 | 0.027* | |
| H2 | 0.761 (6) | 0.7236 (19) | 0.5172 (16) | 0.060 (10)* | |
| H3A | 0.861 (4) | 0.423 (3) | 0.5774 (10) | 0.043 (7)* | |
| H3B | 1.153 (3) | 0.531 (3) | 0.5428 (12) | 0.038 (8)* |
| S1 | 0.0167 (3) | 0.0120 (2) | 0.0151 (2) | 0.0012 (3) | 0.00115 (18) | 0.0003 (2) |
| C5 | 0.0078 (11) | 0.0166 (11) | 0.0191 (11) | −0.0007 (10) | 0.0026 (9) | 0.0030 (9) |
| N3 | 0.0141 (11) | 0.0180 (10) | 0.0163 (9) | 0.0006 (8) | −0.0015 (7) | 0.0049 (8) |
| C2 | 0.0142 (11) | 0.0169 (14) | 0.0180 (10) | −0.0005 (9) | 0.0029 (8) | −0.0029 (9) |
| N1 | 0.0139 (10) | 0.0126 (9) | 0.0142 (9) | 0.0000 (7) | 0.0007 (7) | 0.0017 (7) |
| C4 | 0.0124 (12) | 0.0188 (11) | 0.0163 (11) | −0.0008 (9) | 0.0004 (8) | 0.0044 (9) |
| C6 | 0.0091 (10) | 0.0132 (10) | 0.0160 (10) | −0.0037 (9) | 0.0032 (8) | 0.0004 (9) |
| C7 | 0.0125 (11) | 0.0137 (10) | 0.0133 (10) | −0.0043 (9) | 0.0033 (9) | −0.0010 (9) |
| N2 | 0.0186 (11) | 0.0117 (9) | 0.0145 (9) | 0.0011 (8) | −0.0009 (7) | 0.0004 (8) |
| C3 | 0.0189 (13) | 0.0231 (12) | 0.0133 (10) | −0.0065 (9) | 0.0009 (9) | −0.0015 (10) |
| C1 | 0.0113 (11) | 0.0129 (11) | 0.0129 (10) | 0.0004 (9) | 0.0005 (8) | 0.0027 (8) |
| C8 | 0.0167 (13) | 0.0162 (10) | 0.0215 (11) | 0.0010 (10) | −0.0008 (9) | 0.0034 (9) |
| S1—C1 | 1.746 (2) | N1—C7 | 1.289 (2) |
| S1—C7 | 1.756 (2) | N1—C6 | 1.399 (2) |
| C5—C4 | 1.389 (3) | C4—C3 | 1.379 (3) |
| C5—C6 | 1.397 (3) | C4—H4 | 0.9500 |
| C5—C8 | 1.516 (3) | C6—C1 | 1.407 (2) |
| N3—N2 | 1.420 (2) | C7—N2 | 1.375 (3) |
| N3—H3A | 0.923 (9) | N2—H2 | 0.891 (9) |
| N3—H3B | 0.903 (9) | C3—H3 | 0.9500 |
| C2—C3 | 1.387 (3) | C8—H8A | 0.9800 |
| C2—C1 | 1.388 (2) | C8—H8B | 0.9800 |
| C2—H2A | 0.9500 | C8—H8C | 0.9800 |
| C1—S1—C7 | 87.97 (10) | N1—C7—S1 | 117.74 (15) |
| C4—C5—C6 | 117.47 (18) | N2—C7—S1 | 118.61 (15) |
| C4—C5—C8 | 121.90 (18) | C7—N2—N3 | 115.08 (15) |
| C6—C5—C8 | 120.64 (17) | C7—N2—H2 | 117.6 (16) |
| N2—N3—H3A | 110.0 (13) | N3—N2—H2 | 110.2 (17) |
| N2—N3—H3B | 110.7 (14) | C4—C3—C2 | 121.44 (19) |
| H3A—N3—H3B | 109.6 (12) | C4—C3—H3 | 119.3 |
| C3—C2—C1 | 117.26 (17) | C2—C3—H3 | 119.3 |
| C3—C2—H2A | 121.4 | C2—C1—C6 | 121.80 (18) |
| C1—C2—H2A | 121.4 | C2—C1—S1 | 128.72 (15) |
| C7—N1—C6 | 109.43 (16) | C6—C1—S1 | 109.47 (14) |
| C3—C4—C5 | 121.98 (19) | C5—C8—H8A | 109.5 |
| C3—C4—H4 | 119.0 | C5—C8—H8B | 109.5 |
| C5—C4—H4 | 119.0 | H8A—C8—H8B | 109.5 |
| C5—C6—N1 | 124.57 (18) | C5—C8—H8C | 109.5 |
| C5—C6—C1 | 120.04 (17) | H8A—C8—H8C | 109.5 |
| N1—C6—C1 | 115.39 (17) | H8B—C8—H8C | 109.5 |
| N1—C7—N2 | 123.57 (18) | ||
| C6—C5—C4—C3 | 0.6 (3) | N1—C7—N2—N3 | −165.94 (18) |
| C8—C5—C4—C3 | −179.61 (17) | S1—C7—N2—N3 | 17.4 (2) |
| C4—C5—C6—N1 | 179.46 (18) | C5—C4—C3—C2 | −0.4 (3) |
| C8—C5—C6—N1 | −0.3 (3) | C1—C2—C3—C4 | 0.5 (3) |
| C4—C5—C6—C1 | −0.9 (3) | C3—C2—C1—C6 | −0.9 (3) |
| C8—C5—C6—C1 | 179.27 (16) | C3—C2—C1—S1 | −179.19 (14) |
| C7—N1—C6—C5 | 179.87 (19) | C5—C6—C1—C2 | 1.1 (3) |
| C7—N1—C6—C1 | 0.3 (2) | N1—C6—C1—C2 | −179.26 (17) |
| C6—N1—C7—N2 | −176.41 (18) | C5—C6—C1—S1 | 179.73 (15) |
| C6—N1—C7—S1 | 0.3 (2) | N1—C6—C1—S1 | −0.6 (2) |
| C1—S1—C7—N1 | −0.54 (17) | C7—S1—C1—C2 | 179.11 (18) |
| C1—S1—C7—N2 | 176.31 (16) | C7—S1—C1—C6 | 0.61 (14) |
| H··· | ||||
| N2—H2···N3i | 0.89 (1) | 2.30 (2) | 2.996 (3) | 135 (2) |
| N3—H3A···N1ii | 0.92 (1) | 2.21 (1) | 3.077 (3) | 156.(2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯N3i | 0.89 (1) | 2.30 (2) | 2.996 (3) | 135 (2) |
| N3—H3 | 0.92 (1) | 2.21 (1) | 3.077 (3) | 156 (2) |
Symmetry codes: (i) ; (ii) .