Literature DB >> 21837046

2-Hydrazinyl-4-methyl-1,3-benzothia-zole.

Xu-Feng Liu, Xiao-Yong Yu, Shao-Liang Jiang.   

Abstract

The title compound, C(8)H(9)N(3)S, is almost planar (r.m.s. deviation = 0.019 Å) apart from the terminal -NH(2) grouping [deviation of the N atom = 0.286 (2) Å]. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds, generating (001) sheets.

Entities:  

Year:  2011        PMID: 21837046      PMCID: PMC3152062          DOI: 10.1107/S1600536811020149

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and their biactivity, see Sun & Cui (2008 ▶); Liu & Liu (2011 ▶); Liuet al. (2011a ▶,b ▶). For the synthesis, see: Patel et al. (2010 ▶).

Experimental

Crystal data

C8H9N3S M = 179.24 Monoclinic, a = 3.893 (2) Å b = 7.312 (4) Å c = 14.137 (8) Å β = 93.416 (13)° V = 401.7 (4) Å3 Z = 2 Mo Kα radiation μ = 0.34 mm−1 T = 113 K 0.28 × 0.18 × 0.10 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.910, T max = 0.967 4186 measured reflections 1864 independent reflections 1614 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.057 S = 1.02 1864 reflections 122 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack (1983 ▶), 836 Friedel pairs Flack parameter: −0.09 (6) Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811020149/hb5894sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811020149/hb5894Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811020149/hb5894Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H9N3SF(000) = 188
Mr = 179.24Dx = 1.482 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
a = 3.893 (2) ÅCell parameters from 1356 reflections
b = 7.312 (4) Åθ = 2.9–27.9°
c = 14.137 (8) ŵ = 0.34 mm1
β = 93.416 (13)°T = 113 K
V = 401.7 (4) Å3Prism, colorless
Z = 20.28 × 0.18 × 0.10 mm
Rigaku Saturn CCD area-detector diffractometer1864 independent reflections
Radiation source: rotating anode1614 reflections with I > 2σ(I)
multilayerRint = 0.043
Detector resolution: 14.63 pixels mm-1θmax = 27.9°, θmin = 1.4°
ω and φ scansh = −5→5
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −9→9
Tmin = 0.910, Tmax = 0.967l = −18→18
4186 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.057w = 1/[σ2(Fo2) + (0.006P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
1864 reflectionsΔρmax = 0.28 e Å3
122 parametersΔρmin = −0.20 e Å3
5 restraintsAbsolute structure: Flack (1983), 836 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.09 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.74281 (13)0.41481 (6)0.33097 (3)0.01462 (12)
C50.2809 (5)0.8047 (3)0.18122 (14)0.0144 (5)
N30.9465 (5)0.4807 (2)0.52579 (12)0.0163 (4)
C20.5274 (5)0.4513 (3)0.13713 (13)0.0163 (5)
H2A0.61070.33330.12210.020*
N10.4899 (4)0.7443 (2)0.34709 (11)0.0136 (4)
C40.2524 (5)0.7352 (3)0.08962 (14)0.0158 (5)
H40.14800.80830.04030.019*
C60.4388 (5)0.6942 (3)0.25178 (13)0.0127 (4)
C70.6412 (5)0.6127 (3)0.39382 (13)0.0130 (4)
N20.7110 (4)0.6159 (2)0.49033 (12)0.0150 (4)
C30.3711 (5)0.5633 (3)0.06809 (13)0.0185 (5)
H30.34510.52080.00460.022*
C10.5572 (5)0.5186 (3)0.22906 (13)0.0124 (4)
C80.1482 (5)0.9932 (3)0.20484 (14)0.0182 (5)
H8A0.32961.06180.24040.027*
H8B−0.05180.98120.24330.027*
H8C0.08101.05850.14610.027*
H20.761 (6)0.7236 (19)0.5172 (16)0.060 (10)*
H3A0.861 (4)0.423 (3)0.5774 (10)0.043 (7)*
H3B1.153 (3)0.531 (3)0.5428 (12)0.038 (8)*
U11U22U33U12U13U23
S10.0167 (3)0.0120 (2)0.0151 (2)0.0012 (3)0.00115 (18)0.0003 (2)
C50.0078 (11)0.0166 (11)0.0191 (11)−0.0007 (10)0.0026 (9)0.0030 (9)
N30.0141 (11)0.0180 (10)0.0163 (9)0.0006 (8)−0.0015 (7)0.0049 (8)
C20.0142 (11)0.0169 (14)0.0180 (10)−0.0005 (9)0.0029 (8)−0.0029 (9)
N10.0139 (10)0.0126 (9)0.0142 (9)0.0000 (7)0.0007 (7)0.0017 (7)
C40.0124 (12)0.0188 (11)0.0163 (11)−0.0008 (9)0.0004 (8)0.0044 (9)
C60.0091 (10)0.0132 (10)0.0160 (10)−0.0037 (9)0.0032 (8)0.0004 (9)
C70.0125 (11)0.0137 (10)0.0133 (10)−0.0043 (9)0.0033 (9)−0.0010 (9)
N20.0186 (11)0.0117 (9)0.0145 (9)0.0011 (8)−0.0009 (7)0.0004 (8)
C30.0189 (13)0.0231 (12)0.0133 (10)−0.0065 (9)0.0009 (9)−0.0015 (10)
C10.0113 (11)0.0129 (11)0.0129 (10)0.0004 (9)0.0005 (8)0.0027 (8)
C80.0167 (13)0.0162 (10)0.0215 (11)0.0010 (10)−0.0008 (9)0.0034 (9)
S1—C11.746 (2)N1—C71.289 (2)
S1—C71.756 (2)N1—C61.399 (2)
C5—C41.389 (3)C4—C31.379 (3)
C5—C61.397 (3)C4—H40.9500
C5—C81.516 (3)C6—C11.407 (2)
N3—N21.420 (2)C7—N21.375 (3)
N3—H3A0.923 (9)N2—H20.891 (9)
N3—H3B0.903 (9)C3—H30.9500
C2—C31.387 (3)C8—H8A0.9800
C2—C11.388 (2)C8—H8B0.9800
C2—H2A0.9500C8—H8C0.9800
C1—S1—C787.97 (10)N1—C7—S1117.74 (15)
C4—C5—C6117.47 (18)N2—C7—S1118.61 (15)
C4—C5—C8121.90 (18)C7—N2—N3115.08 (15)
C6—C5—C8120.64 (17)C7—N2—H2117.6 (16)
N2—N3—H3A110.0 (13)N3—N2—H2110.2 (17)
N2—N3—H3B110.7 (14)C4—C3—C2121.44 (19)
H3A—N3—H3B109.6 (12)C4—C3—H3119.3
C3—C2—C1117.26 (17)C2—C3—H3119.3
C3—C2—H2A121.4C2—C1—C6121.80 (18)
C1—C2—H2A121.4C2—C1—S1128.72 (15)
C7—N1—C6109.43 (16)C6—C1—S1109.47 (14)
C3—C4—C5121.98 (19)C5—C8—H8A109.5
C3—C4—H4119.0C5—C8—H8B109.5
C5—C4—H4119.0H8A—C8—H8B109.5
C5—C6—N1124.57 (18)C5—C8—H8C109.5
C5—C6—C1120.04 (17)H8A—C8—H8C109.5
N1—C6—C1115.39 (17)H8B—C8—H8C109.5
N1—C7—N2123.57 (18)
C6—C5—C4—C30.6 (3)N1—C7—N2—N3−165.94 (18)
C8—C5—C4—C3−179.61 (17)S1—C7—N2—N317.4 (2)
C4—C5—C6—N1179.46 (18)C5—C4—C3—C2−0.4 (3)
C8—C5—C6—N1−0.3 (3)C1—C2—C3—C40.5 (3)
C4—C5—C6—C1−0.9 (3)C3—C2—C1—C6−0.9 (3)
C8—C5—C6—C1179.27 (16)C3—C2—C1—S1−179.19 (14)
C7—N1—C6—C5179.87 (19)C5—C6—C1—C21.1 (3)
C7—N1—C6—C10.3 (2)N1—C6—C1—C2−179.26 (17)
C6—N1—C7—N2−176.41 (18)C5—C6—C1—S1179.73 (15)
C6—N1—C7—S10.3 (2)N1—C6—C1—S1−0.6 (2)
C1—S1—C7—N1−0.54 (17)C7—S1—C1—C2179.11 (18)
C1—S1—C7—N2176.31 (16)C7—S1—C1—C60.61 (14)
D—H···AD—HH···AD···AD—H···A
N2—H2···N3i0.89 (1)2.30 (2)2.996 (3)135 (2)
N3—H3A···N1ii0.92 (1)2.21 (1)3.077 (3)156.(2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯N3i0.89 (1)2.30 (2)2.996 (3)135 (2)
N3—H3A⋯N1ii0.92 (1)2.21 (1)3.077 (3)156 (2)

Symmetry codes: (i) ; (ii) .

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