| Literature DB >> 21837026 |
Gao-Xiang Meng1, Hao Ding, Ya-Min Feng, Jian-Hui Zhu, He-Lin Yang.
Abstract
The asymmetric unit of the title compound, C(6)H(5)N(5)·C(9)H(6)O(6), comprises a full mol-ecule each of neutral trimesic acid (tma) and zwitterionic 5-(pyridin-1-ium-3-yl)-5H-1,2,3,4-tetra-zol-5-ide (ptz). The components are linked into a two-dimensional layer by a combination of O-H⋯O, O-H⋯N, N-H⋯O and N-H⋯N hydrogen bonds parallel to the (10[Formula: see text]) plane. Layers comprising alternating rows of tma and ptz are linked into a three-dimensional network by C-H⋯O and π-π inter-actions between tma and tetra-zolate rings [centroid-centroid distance = 3.763 (2) Å], and between pyridinium and tetra-zolate rings [centroid-centroid distance = 3.745 (2) Å].Entities:
Year: 2011 PMID: 21837026 PMCID: PMC3151784 DOI: 10.1107/S1600536811021490
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H5N5·C9H6O6 | |
| Triclinic, | |
| Hall symbol: -p 1 | Mo |
| Cell parameters from 2432 reflections | |
| θ = 2.4–28.3° | |
| µ = 0.13 mm−1 | |
| α = 94.336 (2)° | |
| β = 95.584 (1)° | Block, colourless |
| γ = 98.465 (2)° | 0.16 × 0.12 × 0.10 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 2770 independent reflections |
| Radiation source: fine focus sealed Siemens Mo tube | 2438 reflections with |
| graphite | |
| 0.3° wide ω exposures scans | θmax = 25.5°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 7554 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.005 | |
| 2770 reflections | Δρmax = 0.24 e Å−3 |
| 248 parameters | Δρmin = −0.29 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0853 (4) | 0.4773 (3) | 0.3543 (2) | 0.0287 (6) | |
| C2 | 0.1850 (4) | 0.6185 (3) | 0.3963 (3) | 0.0380 (7) | |
| H2 | 0.2941 | 0.6226 | 0.4410 | 0.046* | |
| C3 | −0.0294 (5) | 0.7514 (3) | 0.3090 (3) | 0.0442 (8) | |
| H3 | −0.0663 | 0.8458 | 0.2951 | 0.053* | |
| C4 | −0.1328 (4) | 0.6155 (4) | 0.2643 (3) | 0.0438 (8) | |
| H4 | −0.2406 | 0.6158 | 0.2190 | 0.053* | |
| C5 | −0.0751 (4) | 0.4771 (3) | 0.2873 (3) | 0.0378 (7) | |
| H5 | −0.1445 | 0.3833 | 0.2575 | 0.045* | |
| C6 | 0.1461 (4) | 0.3330 (3) | 0.3868 (2) | 0.0271 (6) | |
| C7 | 0.6435 (4) | 0.6942 (3) | 0.8877 (2) | 0.0287 (6) | |
| C8 | 0.5465 (4) | 0.7376 (3) | 0.7906 (3) | 0.0306 (6) | |
| H8 | 0.4858 | 0.6622 | 0.7331 | 0.037* | |
| C9 | 0.5391 (4) | 0.8940 (3) | 0.7785 (2) | 0.0283 (6) | |
| C10 | 0.6274 (4) | 1.0065 (3) | 0.8654 (2) | 0.0287 (6) | |
| H10 | 0.6234 | 1.1111 | 0.8571 | 0.034* | |
| C11 | 0.7210 (4) | 0.9634 (3) | 0.9639 (2) | 0.0277 (6) | |
| C12 | 0.7303 (4) | 0.8069 (3) | 0.9750 (2) | 0.0301 (6) | |
| H12 | 0.7947 | 0.7779 | 1.0409 | 0.036* | |
| C13 | 0.6573 (4) | 0.5263 (3) | 0.8965 (2) | 0.0324 (7) | |
| C14 | 0.4369 (4) | 0.9377 (3) | 0.6711 (2) | 0.0313 (7) | |
| C15 | 0.8122 (4) | 1.0852 (3) | 1.0584 (2) | 0.0295 (6) | |
| N1 | 0.1243 (4) | 0.7486 (3) | 0.3726 (3) | 0.0456 (7) | |
| H1 | 0.183 (5) | 0.841 (4) | 0.401 (3) | 0.055* | |
| N2 | 0.2717 (3) | 0.3285 (3) | 0.4749 (2) | 0.0366 (6) | |
| N3 | 0.2783 (3) | 0.1772 (3) | 0.4792 (2) | 0.0364 (6) | |
| N4 | 0.1635 (3) | 0.0944 (3) | 0.3974 (2) | 0.0342 (6) | |
| N5 | 0.0770 (3) | 0.1911 (2) | 0.3364 (2) | 0.0316 (6) | |
| O1 | 0.7675 (4) | 0.5045 (3) | 0.9864 (2) | 0.0643 (8) | |
| H1A | 0.779 (6) | 0.412 (5) | 0.993 (4) | 0.096* | |
| O2 | 0.5762 (4) | 0.4234 (3) | 0.8289 (2) | 0.0646 (8) | |
| O3 | 0.3320 (3) | 0.8463 (2) | 0.60580 (18) | 0.0423 (6) | |
| O4 | 0.4766 (3) | 1.0861 (2) | 0.6547 (2) | 0.0474 (6) | |
| H4A | 0.406 (5) | 1.104 (4) | 0.589 (4) | 0.071* | |
| O5 | 0.8228 (3) | 1.2228 (2) | 1.04881 (19) | 0.0470 (6) | |
| O6 | 0.8802 (3) | 1.0282 (2) | 1.15213 (18) | 0.0409 (6) | |
| H6A | 0.944 (5) | 1.106 (4) | 1.214 (3) | 0.061* |
| C1 | 0.0376 (16) | 0.0218 (14) | 0.0248 (14) | 0.0026 (12) | −0.0011 (12) | 0.0003 (11) |
| C2 | 0.0460 (19) | 0.0257 (15) | 0.0389 (17) | 0.0041 (13) | −0.0080 (14) | 0.0004 (13) |
| C3 | 0.064 (2) | 0.0238 (16) | 0.0460 (19) | 0.0112 (15) | 0.0001 (17) | 0.0118 (14) |
| C4 | 0.051 (2) | 0.0391 (18) | 0.0425 (19) | 0.0149 (15) | −0.0078 (15) | 0.0090 (14) |
| C5 | 0.0473 (18) | 0.0262 (15) | 0.0363 (17) | 0.0028 (13) | −0.0066 (14) | −0.0003 (12) |
| C6 | 0.0311 (15) | 0.0237 (14) | 0.0254 (14) | 0.0029 (11) | −0.0004 (12) | 0.0026 (11) |
| C7 | 0.0331 (15) | 0.0231 (14) | 0.0302 (15) | 0.0049 (11) | 0.0026 (12) | 0.0055 (11) |
| C8 | 0.0295 (15) | 0.0293 (15) | 0.0315 (15) | 0.0017 (12) | −0.0008 (12) | 0.0047 (12) |
| C9 | 0.0288 (15) | 0.0288 (14) | 0.0285 (15) | 0.0074 (12) | 0.0039 (12) | 0.0033 (12) |
| C10 | 0.0353 (16) | 0.0227 (14) | 0.0284 (15) | 0.0068 (11) | 0.0000 (12) | 0.0056 (11) |
| C11 | 0.0301 (15) | 0.0266 (14) | 0.0267 (15) | 0.0071 (11) | 0.0005 (12) | 0.0035 (11) |
| C12 | 0.0362 (16) | 0.0271 (14) | 0.0277 (15) | 0.0085 (12) | −0.0034 (12) | 0.0086 (11) |
| C13 | 0.0412 (17) | 0.0260 (15) | 0.0293 (16) | 0.0048 (13) | −0.0011 (13) | 0.0047 (12) |
| C14 | 0.0341 (16) | 0.0288 (15) | 0.0305 (16) | 0.0064 (12) | −0.0008 (13) | 0.0038 (12) |
| C15 | 0.0353 (16) | 0.0260 (15) | 0.0268 (15) | 0.0077 (12) | −0.0034 (12) | 0.0026 (11) |
| N1 | 0.0549 (18) | 0.0200 (13) | 0.0564 (18) | −0.0011 (12) | −0.0101 (14) | 0.0019 (12) |
| N2 | 0.0457 (15) | 0.0275 (13) | 0.0339 (14) | 0.0054 (11) | −0.0084 (12) | 0.0032 (10) |
| N3 | 0.0462 (15) | 0.0286 (13) | 0.0332 (14) | 0.0087 (11) | −0.0061 (12) | 0.0039 (11) |
| N4 | 0.0411 (14) | 0.0240 (12) | 0.0374 (14) | 0.0079 (11) | −0.0017 (11) | 0.0039 (10) |
| N5 | 0.0410 (14) | 0.0228 (12) | 0.0294 (13) | 0.0063 (10) | −0.0063 (11) | 0.0030 (10) |
| O1 | 0.105 (2) | 0.0261 (12) | 0.0554 (16) | 0.0204 (13) | −0.0349 (15) | 0.0024 (11) |
| O2 | 0.0873 (19) | 0.0271 (12) | 0.0693 (17) | 0.0070 (12) | −0.0330 (15) | −0.0036 (11) |
| O3 | 0.0476 (13) | 0.0375 (12) | 0.0355 (12) | 0.0017 (10) | −0.0160 (10) | −0.0008 (9) |
| O4 | 0.0598 (15) | 0.0344 (12) | 0.0418 (13) | 0.0045 (10) | −0.0263 (11) | 0.0105 (10) |
| O5 | 0.0709 (16) | 0.0194 (11) | 0.0467 (14) | 0.0101 (10) | −0.0186 (11) | 0.0025 (9) |
| O6 | 0.0589 (14) | 0.0245 (11) | 0.0344 (12) | 0.0056 (10) | −0.0194 (10) | 0.0040 (9) |
| C1—C2 | 1.377 (4) | C9—C14 | 1.493 (4) |
| C1—C5 | 1.382 (4) | C10—C11 | 1.379 (4) |
| C1—C6 | 1.468 (4) | C10—H10 | 0.9300 |
| C2—N1 | 1.326 (4) | C11—C12 | 1.394 (4) |
| C2—H2 | 0.9300 | C11—C15 | 1.497 (4) |
| C3—N1 | 1.325 (4) | C12—H12 | 0.9300 |
| C3—C4 | 1.360 (4) | C13—O2 | 1.193 (3) |
| C3—H3 | 0.9300 | C13—O1 | 1.307 (4) |
| C4—C5 | 1.382 (4) | C14—O3 | 1.201 (3) |
| C4—H4 | 0.9300 | C14—O4 | 1.319 (3) |
| C5—H5 | 0.9300 | C15—O5 | 1.207 (3) |
| C6—N2 | 1.328 (3) | C15—O6 | 1.307 (3) |
| C6—N5 | 1.337 (3) | N1—H1 | 0.88 (4) |
| C7—C8 | 1.381 (4) | N2—N3 | 1.335 (3) |
| C7—C12 | 1.390 (4) | N3—N4 | 1.310 (3) |
| C7—C13 | 1.496 (4) | N4—N5 | 1.341 (3) |
| C8—C9 | 1.392 (4) | O1—H1A | 0.83 (5) |
| C8—H8 | 0.9300 | O4—H4A | 0.92 (4) |
| C9—C10 | 1.390 (4) | O6—H6A | 0.98 (4) |
| C2—C1—C5 | 118.1 (3) | C11—C10—H10 | 120.0 |
| C2—C1—C6 | 119.8 (3) | C9—C10—H10 | 120.0 |
| C5—C1—C6 | 122.0 (2) | C10—C11—C12 | 119.9 (2) |
| N1—C2—C1 | 119.6 (3) | C10—C11—C15 | 119.7 (2) |
| N1—C2—H2 | 120.2 | C12—C11—C15 | 120.3 (2) |
| C1—C2—H2 | 120.2 | C7—C12—C11 | 120.1 (2) |
| N1—C3—C4 | 119.7 (3) | C7—C12—H12 | 120.0 |
| N1—C3—H3 | 120.2 | C11—C12—H12 | 120.0 |
| C4—C3—H3 | 120.2 | O2—C13—O1 | 123.6 (3) |
| C3—C4—C5 | 118.8 (3) | O2—C13—C7 | 123.7 (3) |
| C3—C4—H4 | 120.6 | O1—C13—C7 | 112.6 (2) |
| C5—C4—H4 | 120.6 | O3—C14—O4 | 123.9 (3) |
| C1—C5—C4 | 120.4 (3) | O3—C14—C9 | 123.2 (3) |
| C1—C5—H5 | 119.8 | O4—C14—C9 | 112.9 (2) |
| C4—C5—H5 | 119.8 | O5—C15—O6 | 123.2 (3) |
| N2—C6—N5 | 112.1 (2) | O5—C15—C11 | 123.3 (2) |
| N2—C6—C1 | 123.2 (2) | O6—C15—C11 | 113.5 (2) |
| N5—C6—C1 | 124.6 (2) | C3—N1—C2 | 123.4 (3) |
| C8—C7—C12 | 119.8 (2) | C3—N1—H1 | 115 (2) |
| C8—C7—C13 | 119.6 (2) | C2—N1—H1 | 122 (2) |
| C12—C7—C13 | 120.7 (2) | C6—N2—N3 | 104.0 (2) |
| C7—C8—C9 | 120.2 (3) | N4—N3—N2 | 110.7 (2) |
| C7—C8—H8 | 119.9 | N3—N4—N5 | 108.6 (2) |
| C9—C8—H8 | 119.9 | C6—N5—N4 | 104.6 (2) |
| C10—C9—C8 | 119.9 (3) | C13—O1—H1A | 115 (3) |
| C10—C9—C14 | 121.1 (2) | C14—O4—H4A | 107 (2) |
| C8—C9—C14 | 119.0 (2) | C15—O6—H6A | 115 (2) |
| C11—C10—C9 | 120.1 (2) | ||
| C5—C1—C2—N1 | 0.7 (4) | C8—C7—C13—O2 | −6.8 (5) |
| C6—C1—C2—N1 | −176.0 (3) | C12—C7—C13—O2 | 174.6 (3) |
| N1—C3—C4—C5 | 0.5 (5) | C8—C7—C13—O1 | 173.4 (3) |
| C2—C1—C5—C4 | −0.4 (5) | C12—C7—C13—O1 | −5.2 (4) |
| C6—C1—C5—C4 | 176.2 (3) | C10—C9—C14—O3 | −165.2 (3) |
| C3—C4—C5—C1 | −0.2 (5) | C8—C9—C14—O3 | 15.3 (4) |
| C2—C1—C6—N2 | 15.2 (4) | C10—C9—C14—O4 | 16.0 (4) |
| C5—C1—C6—N2 | −161.3 (3) | C8—C9—C14—O4 | −163.6 (3) |
| C2—C1—C6—N5 | −168.4 (3) | C10—C11—C15—O5 | −7.1 (4) |
| C5—C1—C6—N5 | 15.1 (4) | C12—C11—C15—O5 | 172.9 (3) |
| C12—C7—C8—C9 | 1.6 (4) | C10—C11—C15—O6 | 173.3 (3) |
| C13—C7—C8—C9 | −177.0 (3) | C12—C11—C15—O6 | −6.7 (4) |
| C7—C8—C9—C10 | −1.0 (4) | C4—C3—N1—C2 | −0.3 (5) |
| C7—C8—C9—C14 | 178.5 (3) | C1—C2—N1—C3 | −0.4 (5) |
| C8—C9—C10—C11 | −0.5 (4) | N5—C6—N2—N3 | −0.6 (3) |
| C14—C9—C10—C11 | 180.0 (3) | C1—C6—N2—N3 | 176.2 (3) |
| C9—C10—C11—C12 | 1.4 (4) | C6—N2—N3—N4 | 0.4 (3) |
| C9—C10—C11—C15 | −178.6 (3) | N2—N3—N4—N5 | −0.1 (3) |
| C8—C7—C12—C11 | −0.7 (4) | N2—C6—N5—N4 | 0.6 (3) |
| C13—C7—C12—C11 | 178.0 (3) | C1—C6—N5—N4 | −176.2 (3) |
| C10—C11—C12—C7 | −0.8 (4) | N3—N4—N5—C6 | −0.3 (3) |
| C15—C11—C12—C7 | 179.2 (3) |
| H··· | ||||
| N1—H1···N4i | 0.88 (4) | 2.25 (4) | 2.981 (3) | 141 (3) |
| N1—H1···O3 | 0.88 (4) | 2.49 (3) | 2.958 (3) | 114 (3) |
| O1—H1A···O5ii | 0.83 (5) | 1.88 (5) | 2.694 (3) | 165 (5) |
| O4—H4A···N3i | 0.92 (4) | 1.73 (4) | 2.635 (3) | 168 (4) |
| O6—H6A···N4iii | 0.98 (4) | 2.57 (4) | 3.325 (3) | 134 (3) |
| O6—H6A···N5iii | 0.98 (4) | 1.70 (4) | 2.647 (3) | 163 (3) |
| C3—H3···O6iv | 0.93 | 2.41 | 3.230 (3) | 147. |
| C4—H4···O2v | 0.93 | 2.54 | 3.418 (4) | 157. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N4i | 0.88 (4) | 2.25 (4) | 2.981 (3) | 141 (3) |
| N1—H1⋯O3 | 0.88 (4) | 2.49 (3) | 2.958 (3) | 114 (3) |
| O1—H1 | 0.83 (5) | 1.88 (5) | 2.694 (3) | 165 (5) |
| O4—H4 | 0.92 (4) | 1.73 (4) | 2.635 (3) | 168 (4) |
| O6—H6 | 0.98 (4) | 2.57 (4) | 3.325 (3) | 134 (3) |
| O6—H6 | 0.98 (4) | 1.70 (4) | 2.647 (3) | 163 (3) |
| C3—H3⋯O6iv | 0.93 | 2.41 | 3.230 (3) | 147 |
| C4—H4⋯O2v | 0.93 | 2.54 | 3.418 (4) | 157 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .