| Literature DB >> 21837006 |
Hoong-Kun Fun, Wan-Sin Loh, M S Siddegowda, H S Yathirajan, B Narayana.
Abstract
IN THE TITLE COMPOUND (SYSTEMATIC NAME: 2-{4-[3-(5H-dibenz[b,f]azepin-5-yl)prop-yl]piperazin-1-yl}ethanol), C(23)H(29)N(3)O, the 5H-dibenz[b,f]azepine and piperazine rings adopt boat and chair conformations, respectively, and the overall shape of the fused ring part of the molecule is a butterfly. In the crystal, O-H⋯N and C-H⋯O hydrogen bonds link the mol-ecules into a layer parallel to the bc plane.Entities:
Year: 2011 PMID: 21837006 PMCID: PMC3151965 DOI: 10.1107/S1600536811021131
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C23H29N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9885 reflections |
| θ = 2.9–34.2° | |
| µ = 0.08 mm−1 | |
| β = 90.966 (1)° | Block, colourless |
| 0.59 × 0.36 × 0.30 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 7949 independent reflections |
| Radiation source: fine-focus sealed tube | 6682 reflections with |
| graphite | |
| φ and ω scans | θmax = 34.3°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 30830 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 7949 reflections | (Δ/σ)max = 0.001 |
| 248 parameters | Δρmax = 0.56 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.10636 (5) | 1.33255 (6) | 1.06904 (4) | 0.01965 (12) | |
| N1 | 0.33738 (5) | 0.74218 (6) | 0.57588 (4) | 0.01418 (11) | |
| N2 | 0.21096 (5) | 1.06560 (6) | 0.73239 (4) | 0.01326 (11) | |
| N3 | 0.12890 (5) | 1.23458 (6) | 0.87387 (4) | 0.01380 (11) | |
| C1 | 0.35654 (6) | 0.60944 (7) | 0.58110 (5) | 0.01411 (12) | |
| C2 | 0.45637 (6) | 0.56231 (8) | 0.60674 (5) | 0.01763 (13) | |
| H2A | 0.5136 | 0.6192 | 0.6165 | 0.021* | |
| C3 | 0.47316 (7) | 0.43319 (8) | 0.61812 (5) | 0.02086 (15) | |
| H3A | 0.5412 | 0.4027 | 0.6363 | 0.025* | |
| C4 | 0.39006 (8) | 0.34908 (8) | 0.60285 (6) | 0.02318 (16) | |
| H4A | 0.4011 | 0.2610 | 0.6106 | 0.028* | |
| C5 | 0.29077 (7) | 0.39456 (8) | 0.57628 (6) | 0.02090 (15) | |
| H5A | 0.2344 | 0.3367 | 0.5656 | 0.025* | |
| C6 | 0.27213 (6) | 0.52452 (7) | 0.56485 (5) | 0.01608 (13) | |
| C7 | 0.16454 (6) | 0.56539 (8) | 0.53991 (5) | 0.01885 (14) | |
| H7A | 0.1084 | 0.5136 | 0.5611 | 0.023* | |
| C8 | 0.13636 (6) | 0.66812 (8) | 0.49038 (5) | 0.01869 (14) | |
| H8A | 0.0627 | 0.6846 | 0.4831 | 0.022* | |
| C9 | 0.20930 (6) | 0.75680 (7) | 0.44664 (5) | 0.01590 (13) | |
| C10 | 0.17851 (7) | 0.81058 (8) | 0.36112 (5) | 0.02081 (15) | |
| H10A | 0.1099 | 0.7931 | 0.3362 | 0.025* | |
| C11 | 0.24589 (8) | 0.88867 (8) | 0.31209 (5) | 0.02329 (16) | |
| H11A | 0.2239 | 0.9232 | 0.2539 | 0.028* | |
| C12 | 0.34570 (7) | 0.91589 (8) | 0.34884 (6) | 0.02238 (16) | |
| H12A | 0.3926 | 0.9685 | 0.3153 | 0.027* | |
| C13 | 0.37721 (6) | 0.86616 (8) | 0.43480 (5) | 0.01829 (14) | |
| H13A | 0.4454 | 0.8858 | 0.4597 | 0.022* | |
| C14 | 0.30944 (6) | 0.78756 (7) | 0.48477 (5) | 0.01414 (12) | |
| C15 | 0.40721 (6) | 0.82280 (7) | 0.63287 (5) | 0.01655 (13) | |
| H15A | 0.4750 | 0.8347 | 0.6004 | 0.020* | |
| H15B | 0.4229 | 0.7799 | 0.6928 | 0.020* | |
| C16 | 0.35831 (6) | 0.95205 (7) | 0.65234 (5) | 0.01594 (13) | |
| H16A | 0.4100 | 1.0040 | 0.6881 | 0.019* | |
| H16B | 0.3434 | 0.9954 | 0.5925 | 0.019* | |
| C17 | 0.25587 (6) | 0.94200 (7) | 0.70697 (5) | 0.01620 (13) | |
| H17A | 0.2028 | 0.8949 | 0.6691 | 0.019* | |
| H17B | 0.2700 | 0.8929 | 0.7645 | 0.019* | |
| C18 | 0.10673 (6) | 1.04721 (7) | 0.77555 (5) | 0.01661 (13) | |
| H18A | 0.1148 | 0.9920 | 0.8308 | 0.020* | |
| H18B | 0.0580 | 1.0051 | 0.7307 | 0.020* | |
| C19 | 0.06022 (6) | 1.17294 (8) | 0.80442 (5) | 0.01601 (13) | |
| H19A | 0.0522 | 1.2281 | 0.7491 | 0.019* | |
| H19B | −0.0109 | 1.1594 | 0.8307 | 0.019* | |
| C20 | 0.23213 (6) | 1.25503 (7) | 0.83151 (5) | 0.01593 (13) | |
| H20A | 0.2805 | 1.2962 | 0.8772 | 0.019* | |
| H20B | 0.2237 | 1.3121 | 0.7773 | 0.019* | |
| C21 | 0.28023 (6) | 1.13121 (7) | 0.80016 (5) | 0.01553 (13) | |
| H21A | 0.3497 | 1.1479 | 0.7716 | 0.019* | |
| H21B | 0.2924 | 1.0762 | 0.8550 | 0.019* | |
| C22 | 0.08179 (6) | 1.35398 (7) | 0.90363 (5) | 0.01556 (13) | |
| H22A | 0.0054 | 1.3403 | 0.9144 | 0.019* | |
| H22B | 0.0881 | 1.4162 | 0.8526 | 0.019* | |
| C23 | 0.13187 (6) | 1.40919 (7) | 0.99127 (5) | 0.01650 (13) | |
| H23A | 0.2097 | 1.4132 | 0.9847 | 0.020* | |
| H23B | 0.1053 | 1.4960 | 1.0010 | 0.020* | |
| H1O1 | 0.1474 (12) | 1.3609 (15) | 1.1160 (11) | 0.047 (4)* |
| O1 | 0.0255 (3) | 0.0212 (3) | 0.0123 (2) | −0.0037 (2) | −0.0003 (2) | −0.00024 (19) |
| N1 | 0.0171 (3) | 0.0124 (3) | 0.0129 (2) | 0.0007 (2) | −0.00349 (19) | −0.00178 (19) |
| N2 | 0.0140 (2) | 0.0135 (3) | 0.0123 (2) | −0.0022 (2) | −0.00079 (19) | −0.00190 (19) |
| N3 | 0.0138 (2) | 0.0157 (3) | 0.0119 (2) | −0.0006 (2) | −0.00102 (19) | −0.00231 (19) |
| C1 | 0.0180 (3) | 0.0130 (3) | 0.0113 (3) | 0.0014 (2) | −0.0002 (2) | −0.0009 (2) |
| C2 | 0.0203 (3) | 0.0175 (3) | 0.0150 (3) | 0.0033 (3) | −0.0019 (2) | −0.0009 (2) |
| C3 | 0.0276 (4) | 0.0191 (3) | 0.0159 (3) | 0.0078 (3) | −0.0006 (3) | 0.0010 (2) |
| C4 | 0.0352 (4) | 0.0149 (3) | 0.0196 (3) | 0.0043 (3) | 0.0037 (3) | 0.0018 (3) |
| C5 | 0.0289 (4) | 0.0155 (3) | 0.0183 (3) | −0.0023 (3) | 0.0036 (3) | −0.0002 (3) |
| C6 | 0.0199 (3) | 0.0153 (3) | 0.0131 (3) | −0.0010 (2) | 0.0018 (2) | −0.0017 (2) |
| C7 | 0.0178 (3) | 0.0205 (4) | 0.0184 (3) | −0.0035 (3) | 0.0021 (2) | −0.0039 (3) |
| C8 | 0.0157 (3) | 0.0219 (4) | 0.0184 (3) | 0.0004 (3) | −0.0010 (2) | −0.0059 (3) |
| C9 | 0.0172 (3) | 0.0165 (3) | 0.0139 (3) | 0.0036 (2) | −0.0019 (2) | −0.0036 (2) |
| C10 | 0.0251 (4) | 0.0211 (4) | 0.0160 (3) | 0.0063 (3) | −0.0062 (3) | −0.0038 (3) |
| C11 | 0.0349 (4) | 0.0213 (4) | 0.0136 (3) | 0.0087 (3) | −0.0013 (3) | −0.0003 (3) |
| C12 | 0.0306 (4) | 0.0196 (4) | 0.0171 (3) | 0.0047 (3) | 0.0058 (3) | 0.0021 (3) |
| C13 | 0.0194 (3) | 0.0177 (3) | 0.0177 (3) | 0.0023 (3) | 0.0023 (2) | −0.0002 (2) |
| C14 | 0.0163 (3) | 0.0136 (3) | 0.0125 (3) | 0.0029 (2) | −0.0007 (2) | −0.0020 (2) |
| C15 | 0.0172 (3) | 0.0151 (3) | 0.0172 (3) | 0.0009 (2) | −0.0041 (2) | −0.0034 (2) |
| C16 | 0.0179 (3) | 0.0134 (3) | 0.0165 (3) | −0.0006 (2) | −0.0003 (2) | −0.0025 (2) |
| C17 | 0.0190 (3) | 0.0126 (3) | 0.0170 (3) | −0.0016 (2) | 0.0007 (2) | −0.0017 (2) |
| C18 | 0.0168 (3) | 0.0181 (3) | 0.0150 (3) | −0.0054 (2) | 0.0012 (2) | −0.0026 (2) |
| C19 | 0.0135 (3) | 0.0210 (3) | 0.0135 (3) | −0.0019 (2) | −0.0009 (2) | −0.0027 (2) |
| C20 | 0.0142 (3) | 0.0159 (3) | 0.0177 (3) | −0.0019 (2) | 0.0001 (2) | −0.0039 (2) |
| C21 | 0.0144 (3) | 0.0169 (3) | 0.0152 (3) | −0.0003 (2) | −0.0026 (2) | −0.0037 (2) |
| C22 | 0.0169 (3) | 0.0163 (3) | 0.0135 (3) | 0.0020 (2) | −0.0008 (2) | −0.0005 (2) |
| C23 | 0.0198 (3) | 0.0161 (3) | 0.0136 (3) | −0.0008 (2) | 0.0009 (2) | −0.0015 (2) |
| O1—C23 | 1.4221 (9) | C11—C12 | 1.3879 (13) |
| O1—H1O1 | 0.896 (16) | C11—H11A | 0.9500 |
| N1—C1 | 1.4284 (10) | C12—C13 | 1.3941 (11) |
| N1—C14 | 1.4327 (9) | C12—H12A | 0.9500 |
| N1—C15 | 1.4669 (9) | C13—C14 | 1.4002 (11) |
| N2—C21 | 1.4719 (9) | C13—H13A | 0.9500 |
| N2—C17 | 1.4750 (10) | C15—C16 | 1.5295 (10) |
| N2—C18 | 1.4766 (9) | C15—H15A | 0.9900 |
| N3—C20 | 1.4633 (9) | C15—H15B | 0.9900 |
| N3—C19 | 1.4641 (9) | C16—C17 | 1.5275 (11) |
| N3—C22 | 1.4644 (10) | C16—H16A | 0.9900 |
| C1—C2 | 1.3988 (10) | C16—H16B | 0.9900 |
| C1—C6 | 1.4109 (11) | C17—H17A | 0.9900 |
| C2—C3 | 1.3932 (11) | C17—H17B | 0.9900 |
| C2—H2A | 0.9500 | C18—C19 | 1.5160 (11) |
| C3—C4 | 1.3908 (13) | C18—H18A | 0.9900 |
| C3—H3A | 0.9500 | C18—H18B | 0.9900 |
| C4—C5 | 1.3900 (13) | C19—H19A | 0.9900 |
| C4—H4A | 0.9500 | C19—H19B | 0.9900 |
| C5—C6 | 1.4057 (11) | C20—C21 | 1.5168 (11) |
| C5—H5A | 0.9500 | C20—H20A | 0.9900 |
| C6—C7 | 1.4641 (11) | C20—H20B | 0.9900 |
| C7—C8 | 1.3446 (12) | C21—H21A | 0.9900 |
| C7—H7A | 0.9500 | C21—H21B | 0.9900 |
| C8—C9 | 1.4644 (12) | C22—C23 | 1.5163 (10) |
| C8—H8A | 0.9500 | C22—H22A | 0.9900 |
| C9—C10 | 1.4029 (11) | C22—H22B | 0.9900 |
| C9—C14 | 1.4072 (10) | C23—H23A | 0.9900 |
| C10—C11 | 1.3870 (13) | C23—H23B | 0.9900 |
| C10—H10A | 0.9500 | ||
| C23—O1—H1O1 | 105.3 (10) | N1—C15—H15A | 109.1 |
| C1—N1—C14 | 114.65 (6) | C16—C15—H15A | 109.1 |
| C1—N1—C15 | 116.37 (6) | N1—C15—H15B | 109.1 |
| C14—N1—C15 | 116.79 (6) | C16—C15—H15B | 109.1 |
| C21—N2—C17 | 110.88 (6) | H15A—C15—H15B | 107.8 |
| C21—N2—C18 | 107.94 (6) | C17—C16—C15 | 112.28 (6) |
| C17—N2—C18 | 109.61 (6) | C17—C16—H16A | 109.1 |
| C20—N3—C19 | 107.69 (5) | C15—C16—H16A | 109.1 |
| C20—N3—C22 | 111.24 (6) | C17—C16—H16B | 109.1 |
| C19—N3—C22 | 110.21 (6) | C15—C16—H16B | 109.1 |
| C2—C1—C6 | 119.36 (7) | H16A—C16—H16B | 107.9 |
| C2—C1—N1 | 121.07 (7) | N2—C17—C16 | 113.42 (6) |
| C6—C1—N1 | 119.49 (6) | N2—C17—H17A | 108.9 |
| C3—C2—C1 | 121.06 (8) | C16—C17—H17A | 108.9 |
| C3—C2—H2A | 119.5 | N2—C17—H17B | 108.9 |
| C1—C2—H2A | 119.5 | C16—C17—H17B | 108.9 |
| C4—C3—C2 | 119.84 (8) | H17A—C17—H17B | 107.7 |
| C4—C3—H3A | 120.1 | N2—C18—C19 | 110.53 (6) |
| C2—C3—H3A | 120.1 | N2—C18—H18A | 109.5 |
| C5—C4—C3 | 119.69 (8) | C19—C18—H18A | 109.5 |
| C5—C4—H4A | 120.2 | N2—C18—H18B | 109.5 |
| C3—C4—H4A | 120.2 | C19—C18—H18B | 109.5 |
| C4—C5—C6 | 121.32 (8) | H18A—C18—H18B | 108.1 |
| C4—C5—H5A | 119.3 | N3—C19—C18 | 110.52 (6) |
| C6—C5—H5A | 119.3 | N3—C19—H19A | 109.5 |
| C5—C6—C1 | 118.73 (7) | C18—C19—H19A | 109.5 |
| C5—C6—C7 | 118.10 (7) | N3—C19—H19B | 109.5 |
| C1—C6—C7 | 123.14 (7) | C18—C19—H19B | 109.5 |
| C8—C7—C6 | 127.21 (7) | H19A—C19—H19B | 108.1 |
| C8—C7—H7A | 116.4 | N3—C20—C21 | 111.04 (6) |
| C6—C7—H7A | 116.4 | N3—C20—H20A | 109.4 |
| C7—C8—C9 | 125.70 (7) | C21—C20—H20A | 109.4 |
| C7—C8—H8A | 117.1 | N3—C20—H20B | 109.4 |
| C9—C8—H8A | 117.1 | C21—C20—H20B | 109.4 |
| C10—C9—C14 | 118.72 (7) | H20A—C20—H20B | 108.0 |
| C10—C9—C8 | 117.98 (7) | N2—C21—C20 | 111.61 (6) |
| C14—C9—C8 | 123.27 (7) | N2—C21—H21A | 109.3 |
| C11—C10—C9 | 121.56 (8) | C20—C21—H21A | 109.3 |
| C11—C10—H10A | 119.2 | N2—C21—H21B | 109.3 |
| C9—C10—H10A | 119.2 | C20—C21—H21B | 109.3 |
| C10—C11—C12 | 119.42 (7) | H21A—C21—H21B | 108.0 |
| C10—C11—H11A | 120.3 | N3—C22—C23 | 114.20 (6) |
| C12—C11—H11A | 120.3 | N3—C22—H22A | 108.7 |
| C11—C12—C13 | 120.12 (8) | C23—C22—H22A | 108.7 |
| C11—C12—H12A | 119.9 | N3—C22—H22B | 108.7 |
| C13—C12—H12A | 119.9 | C23—C22—H22B | 108.7 |
| C12—C13—C14 | 120.73 (8) | H22A—C22—H22B | 107.6 |
| C12—C13—H13A | 119.6 | O1—C23—C22 | 109.58 (6) |
| C14—C13—H13A | 119.6 | O1—C23—H23A | 109.8 |
| C13—C14—C9 | 119.38 (7) | C22—C23—H23A | 109.8 |
| C13—C14—N1 | 121.65 (7) | O1—C23—H23B | 109.8 |
| C9—C14—N1 | 118.91 (7) | C22—C23—H23B | 109.8 |
| N1—C15—C16 | 112.50 (6) | H23A—C23—H23B | 108.2 |
| C14—N1—C1—C2 | 116.85 (7) | C10—C9—C14—C13 | −2.75 (11) |
| C15—N1—C1—C2 | −24.50 (10) | C8—C9—C14—C13 | 175.33 (7) |
| C14—N1—C1—C6 | −66.45 (9) | C10—C9—C14—N1 | 174.38 (7) |
| C15—N1—C1—C6 | 152.20 (7) | C8—C9—C14—N1 | −7.54 (11) |
| C6—C1—C2—C3 | −1.21 (11) | C1—N1—C14—C13 | −111.94 (8) |
| N1—C1—C2—C3 | 175.49 (7) | C15—N1—C14—C13 | 29.25 (10) |
| C1—C2—C3—C4 | 0.74 (12) | C1—N1—C14—C9 | 71.01 (8) |
| C2—C3—C4—C5 | 0.03 (12) | C15—N1—C14—C9 | −147.81 (7) |
| C3—C4—C5—C6 | −0.32 (12) | C1—N1—C15—C16 | −158.48 (6) |
| C4—C5—C6—C1 | −0.14 (11) | C14—N1—C15—C16 | 61.01 (8) |
| C4—C5—C6—C7 | −177.90 (7) | N1—C15—C16—C17 | 61.73 (8) |
| C2—C1—C6—C5 | 0.90 (10) | C21—N2—C17—C16 | −67.12 (8) |
| N1—C1—C6—C5 | −175.86 (7) | C18—N2—C17—C16 | 173.81 (6) |
| C2—C1—C6—C7 | 178.53 (7) | C15—C16—C17—N2 | 175.98 (6) |
| N1—C1—C6—C7 | 1.78 (10) | C21—N2—C18—C19 | 57.76 (8) |
| C5—C6—C7—C8 | −150.54 (8) | C17—N2—C18—C19 | 178.62 (6) |
| C1—C6—C7—C8 | 31.80 (12) | C20—N3—C19—C18 | 60.33 (8) |
| C6—C7—C8—C9 | 3.66 (13) | C22—N3—C19—C18 | −178.17 (6) |
| C7—C8—C9—C10 | 144.64 (8) | N2—C18—C19—N3 | −61.60 (8) |
| C7—C8—C9—C14 | −33.45 (12) | C19—N3—C20—C21 | −58.73 (8) |
| C14—C9—C10—C11 | 2.62 (12) | C22—N3—C20—C21 | −179.59 (6) |
| C8—C9—C10—C11 | −175.56 (7) | C17—N2—C21—C20 | −176.59 (6) |
| C9—C10—C11—C12 | −0.88 (13) | C18—N2—C21—C20 | −56.52 (8) |
| C10—C11—C12—C13 | −0.73 (12) | N3—C20—C21—N2 | 58.74 (8) |
| C11—C12—C13—C14 | 0.55 (12) | C20—N3—C22—C23 | −74.86 (8) |
| C12—C13—C14—C9 | 1.22 (11) | C19—N3—C22—C23 | 165.77 (6) |
| C12—C13—C14—N1 | −175.83 (7) | N3—C22—C23—O1 | −69.38 (8) |
| H··· | ||||
| O1—H1O1···N2i | 0.896 (16) | 1.999 (16) | 2.8822 (9) | 168.3 (14) |
| C5—H5A···O1ii | 0.95 | 2.41 | 3.3478 (11) | 167. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1O1⋯N2i | 0.896 (16) | 1.999 (16) | 2.8822 (9) | 168.3 (14) |
| C5—H5 | 0.95 | 2.41 | 3.3478 (11) | 167 |
Symmetry codes: (i) ; (ii) .