Literature DB >> 21836999

N,N'-Bis(3-methyl-phen-yl)succinamide dihydrate.

B S Saraswathi, Sabine Foro, B Thimme Gowda.   

Abstract

The asymmetric unit of the title compound, C(18)H(20)N(2)O(2)·2H(2)O, contains half a mol-ecule with a center of symmetry at the mid-point of the central C-C bond. The N-H bonds in the amide fragments are anti to the meta-methyl groups in the adjacent benzene rings. The dihedral angle between the benzene ring and the NH-C(O)-CH(2) segment in the two halves of the mol-ecule is 5.6 (4)°. In the crystal, the packing of mol-ecules through O-H⋯O and N-H⋯O hydrogen-bonding inter-actions leads to the formation of layers parallel to the bc plane. The methyl group is disordered with respect to the 3- and 5-positions of the benzene ring, with site-occupation factors of 0.910 (8) and 0.090 (8).

Entities:  

Year:  2011        PMID: 21836999      PMCID: PMC3152126          DOI: 10.1107/S1600536811020940

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the study of the effect of substituents on the structures of N-(ar­yl)-amides, see: Gowda et al. (2000 ▶); Saraswathi et al. (2011a ▶,b ▶). For the effect of substituents on the structures of N-(ar­yl)methane­sulfonamides, see: Gowda et al. (2007 ▶). For similar structures, see: Pierrot et al. (1984 ▶).

Experimental

Crystal data

C18H20N2O2·2H2O M = 332.39 Monoclinic, a = 13.401 (4) Å b = 4.937 (2) Å c = 14.446 (4) Å β = 108.67 (3)° V = 905.5 (5) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.48 × 0.12 × 0.04 mm

Data collection

Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.960, T max = 0.997 2857 measured reflections 1679 independent reflections 797 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.126 wR(F 2) = 0.159 S = 1.23 1679 reflections 123 parameters 10 restraints H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811020940/wm2494sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811020940/wm2494Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811020940/wm2494Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20N2O2·2H2OF(000) = 356
Mr = 332.39Dx = 1.219 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 433 reflections
a = 13.401 (4) Åθ = 2.9–28.2°
b = 4.937 (2) ŵ = 0.09 mm1
c = 14.446 (4) ÅT = 293 K
β = 108.67 (3)°Needle, colourless
V = 905.5 (5) Å30.48 × 0.12 × 0.04 mm
Z = 2
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector1679 independent reflections
Radiation source: fine-focus sealed tube797 reflections with I > 2σ(I)
graphiteRint = 0.064
Rotation method data acquisition using ω scansθmax = 25.7°, θmin = 2.9°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −10→16
Tmin = 0.960, Tmax = 0.997k = −6→4
2857 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.126Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.159H-atom parameters constrained
S = 1.23w = 1/[σ2(Fo2) + (0.P)2 + 1.5559P] where P = (Fo2 + 2Fc2)/3
1679 reflections(Δ/σ)max = 0.008
123 parametersΔρmax = 0.23 e Å3
10 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.1286 (3)0.1598 (8)0.4781 (2)0.0590 (12)
N10.1521 (3)0.1149 (9)0.6385 (3)0.0471 (13)
H1N0.13130.17910.68460.056*
C10.2292 (4)−0.0896 (12)0.6675 (4)0.0467 (15)
C20.2784 (4)−0.2019 (13)0.6062 (4)0.0582 (17)
H20.2614−0.14120.54210.070*
C30.3535 (5)−0.4063 (13)0.6396 (6)0.0668 (19)
C40.3776 (5)−0.4944 (14)0.7340 (6)0.076 (2)
H40.4281−0.62880.75720.091*
C50.3280 (5)−0.3861 (15)0.7938 (6)0.081 (2)
H50.3439−0.45100.85740.098*
C60.2547 (5)−0.1828 (13)0.7627 (4)0.0625 (18)
H60.2226−0.10860.80510.075*
C70.1061 (4)0.2251 (11)0.5504 (4)0.0408 (14)
C80.0227 (4)0.4323 (11)0.5484 (3)0.0407 (14)
H8A−0.03370.34410.56550.049*
H8B0.05300.56910.59750.049*
C90.4042 (6)−0.5247 (16)0.5729 (5)0.098 (3)0.910 (8)
H9A0.4538−0.39790.56240.147*0.910 (8)
H9B0.3516−0.56610.51160.147*0.910 (8)
H9C0.4403−0.68780.60100.147*0.910 (8)
C9'0.367 (4)−0.529 (11)0.878 (4)0.041 (18)0.090 (8)
H9'A0.4200−0.65660.87500.061*0.090 (8)
H9'B0.3956−0.40780.93170.061*0.090 (8)
H9'C0.3080−0.62410.88610.061*0.090 (8)
O20.0524 (3)0.1884 (9)0.2803 (2)0.0583 (12)
H210.00460.30060.26190.087*
H220.07560.17470.34150.087*
U11U22U33U12U13U23
O10.071 (3)0.067 (3)0.038 (2)0.022 (2)0.016 (2)−0.002 (2)
N10.054 (3)0.047 (3)0.040 (3)0.010 (3)0.015 (2)−0.002 (2)
C10.038 (3)0.038 (4)0.057 (4)−0.006 (3)0.006 (3)−0.005 (3)
C20.052 (4)0.055 (4)0.067 (4)0.000 (4)0.018 (3)0.002 (4)
C30.043 (4)0.053 (5)0.101 (6)0.005 (4)0.018 (4)0.003 (4)
C40.057 (5)0.056 (5)0.098 (6)0.010 (4)0.001 (4)0.020 (5)
C50.080 (6)0.070 (6)0.080 (5)0.009 (5)0.006 (4)0.023 (5)
C60.067 (4)0.058 (5)0.054 (4)0.007 (4)0.007 (3)0.009 (4)
C70.046 (4)0.035 (4)0.037 (3)−0.004 (3)0.007 (3)0.000 (3)
C80.051 (3)0.035 (4)0.036 (3)0.006 (3)0.014 (3)−0.001 (3)
C90.086 (6)0.099 (7)0.121 (7)0.037 (5)0.051 (5)0.005 (6)
C9'0.041 (18)0.040 (19)0.040 (18)0.000 (5)0.013 (7)0.001 (5)
O20.079 (3)0.062 (3)0.037 (2)0.012 (2)0.023 (2)0.008 (2)
O1—C71.219 (5)C6—H60.9300
N1—C71.340 (6)C7—C81.509 (6)
N1—C11.409 (6)C8—C8i1.492 (8)
N1—H1N0.8600C8—H8A0.9700
C1—C21.378 (7)C8—H8B0.9700
C1—C61.385 (7)C9—H9A0.9600
C2—C31.398 (8)C9—H9B0.9600
C2—H20.9300C9—H9C0.9600
C3—C41.368 (8)C9'—H9'A0.9600
C3—C91.466 (8)C9'—H9'B0.9600
C4—C51.358 (8)C9'—H9'C0.9600
C4—H40.9300O2—H210.8235
C5—C61.375 (8)O2—H220.8398
C5—H50.9300
C7—N1—C1130.1 (5)C1—C6—H6120.3
C7—N1—H1N115.0O1—C7—N1122.8 (5)
C1—N1—H1N115.0O1—C7—C8123.2 (5)
C2—C1—C6119.1 (6)N1—C7—C8114.0 (5)
C2—C1—N1123.6 (5)C8i—C8—C7113.5 (5)
C6—C1—N1117.2 (5)C8i—C8—H8A108.9
C1—C2—C3120.6 (6)C7—C8—H8A108.9
C1—C2—H2119.7C8i—C8—H8B108.9
C3—C2—H2119.7C7—C8—H8B108.9
C4—C3—C2119.2 (6)H8A—C8—H8B107.7
C4—C3—C9121.1 (7)C3—C9—H9A109.5
C2—C3—C9119.7 (7)C3—C9—H9B109.5
C5—C4—C3120.1 (7)H9A—C9—H9B109.5
C5—C4—H4119.9C3—C9—H9C109.5
C3—C4—H4119.9H9A—C9—H9C109.5
C4—C5—C6121.5 (7)H9B—C9—H9C109.5
C4—C5—H5119.2H9'A—C9'—H9'B109.5
C6—C5—H5119.2H9'A—C9'—H9'C109.5
C5—C6—C1119.4 (6)H9'B—C9'—H9'C109.5
C5—C6—H6120.3H21—O2—H22112.4
C7—N1—C1—C25.4 (9)C3—C4—C5—C6−1.5 (11)
C7—N1—C1—C6−173.6 (5)C4—C5—C6—C11.3 (10)
C6—C1—C2—C3−0.3 (8)C2—C1—C6—C5−0.4 (9)
N1—C1—C2—C3−179.4 (5)N1—C1—C6—C5178.7 (5)
C1—C2—C3—C40.1 (9)C1—N1—C7—O1−1.5 (9)
C1—C2—C3—C9179.4 (6)C1—N1—C7—C8177.3 (5)
C2—C3—C4—C50.8 (10)O1—C7—C8—C8i−5.3 (9)
C9—C3—C4—C5−178.5 (7)N1—C7—C8—C8i175.9 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2ii0.862.102.946 (6)169.
O2—H21···O2iii0.822.082.836 (4)153.
O2—H22···O10.841.872.713 (5)178.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O2i0.862.102.946 (6)169
O2—H21⋯O2ii0.822.082.836 (4)153
O2—H22⋯O10.841.872.713 (5)178

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N,N'-Bis(3-chloro-phen-yl)succinamide.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-26

3.  N,N'-Bis(2-methyl-phen-yl)succinamide.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-12

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  2 in total

1.  Models for potential dendritic nitric oxide donors: crystal structures of two 2-nitroanilino precursors and nitric oxide-release behavior of the nitrosated derivatives.

Authors:  Alec R Badour; Corey J Arnett-Butscher; Dillip K Mohanty; Philip J Squattrito; Kelly J Lambright; Kristin Kirschbaum
Journal:  Acta Crystallogr C Struct Chem       Date:  2018-08-28       Impact factor: 1.172

2.  N-(3-Chloro-phen-yl)-N'-(3-methyl-phen-yl)succinamide.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-23
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.