Literature DB >> 21836978

Dimethyl hydrazine-1,2-dicarboxyl-ate-triphenyl-phosphine oxide (1/1).

Bogdan Doboszewski, James McGarrah, Alexander Y Nazarenko, Fabio da Paixao Soares.   

Abstract

In the crystal structure of the title compound, C(4)H(8)N(2)O(4)·C(18)H(15)OP, two triphenyl-phosphine oxide mol-ecules and two dimethyl hydrazine-1,2-dicarboxyl-ate mol-ecules are connected via N-H⋯O hydrogen bonds of moderate strength and are related via a twofold rotational axis. Weak C(ar)-H⋯ O contacts strengthen the crystal structure.

Entities:  

Year:  2011        PMID: 21836978      PMCID: PMC3151943          DOI: 10.1107/S160053681101991X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the Mitsunobu reaction, see: Mitsunobu (1981 ▶); Hughes (1992 ▶), Swamy et al. (2009 ▶). For the structures of analogous compounds, see: Anderson et al. (1996 ▶); Héroux & Brisse (1997 ▶); Wang et al. (2007 ▶). For the synthesis of this and related compounds, see Doboszewski (1997 ▶, 2009 ▶).

Experimental

Crystal data

C4H8N2O4·C18H15OP M = 426.39 Monoclinic, a = 26.494 (3) Å b = 8.5545 (9) Å c = 20.4426 (19) Å β = 109.090 (3)° V = 4378.3 (8) Å3 Z = 8 Mo Kα radiation μ = 0.16 mm−1 T = 200 K 0.8 × 0.7 × 0.4 mm

Data collection

Bruker SMART X2S diffractometer Absorption correction: multi-scan (SADABS (Sheldrick, 2008a ▶) T min = 0.84, T max = 0.93 20468 measured reflections 3862 independent reflections 2956 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.095 S = 1.03 3862 reflections 298 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.30 e Å−3 Data collection: GIS (Bruker, 2010 ▶); cell refinement: APEX2 (Bruker, 2010 ▶) and SAINT (Bruker, 2009 ▶); data reduction: SAINT and XPREP (Bruker, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681101991X/mw2011sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681101991X/mw2011Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681101991X/mw2011Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report Enhanced figure: interactive version of Fig. 3
C4H8N2O4·C18H15OPF(000) = 1792
Mr = 426.39Dx = 1.294 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3730 reflections
a = 26.494 (3) Åθ = 2.5–24.4°
b = 8.5545 (9) ŵ = 0.16 mm1
c = 20.4426 (19) ÅT = 200 K
β = 109.090 (3)°Prism, colourless
V = 4378.3 (8) Å30.8 × 0.7 × 0.4 mm
Z = 8
Bruker SMART X2S diffractometer3862 independent reflections
Radiation source: XOS X-beam microfocus source2956 reflections with I > 2σ(I)
doubly curved silicon crystalRint = 0.036
ω scansθmax = 25.1°, θmin = 2.5°
Absorption correction: multi-scan (SADABS (Sheldrick, 2008a)h = −31→31
Tmin = 0.84, Tmax = 0.93k = −10→10
20468 measured reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0533P)2] where P = (Fo2 + 2Fc2)/3
3862 reflections(Δ/σ)max = 0.001
298 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.149303 (17)0.57905 (5)0.87467 (2)0.02544 (14)
O1−0.00845 (5)0.79421 (15)0.65671 (7)0.0488 (4)
O20.07350 (5)0.70178 (15)0.66494 (6)0.0447 (3)
O30.08693 (5)0.23349 (15)0.65300 (7)0.0476 (4)
O40.01686 (5)0.35822 (15)0.57612 (6)0.0451 (3)
O50.10118 (4)0.50237 (13)0.82537 (5)0.0294 (3)
N10.00680 (6)0.54291 (18)0.67207 (8)0.0378 (4)
H1−0.0244 (8)0.535 (2)0.6754 (10)0.048 (6)*
N20.03969 (6)0.41275 (18)0.68918 (8)0.0372 (4)
H20.0640 (7)0.419 (2)0.7272 (10)0.036 (5)*
C10.00936 (10)0.9500 (2)0.65050 (13)0.0638 (7)
H1C−0.0205 (4)1.0138 (9)0.6276 (8)0.096*
H1B0.0332 (6)0.9482 (3)0.6246 (8)0.096*
H1A0.0271 (6)0.9911 (9)0.6953 (6)0.096*
C20.02861 (7)0.6822 (2)0.66519 (8)0.0351 (4)
C30.05118 (7)0.3283 (2)0.63982 (9)0.0349 (4)
C40.02347 (10)0.2626 (3)0.52124 (11)0.0646 (7)
H4C0.0053 (6)0.3099 (11)0.4776 (6)0.097*
H4B0.0089 (6)0.1613 (14)0.5229 (5)0.097*
H4A0.0606 (5)0.2535 (15)0.5269 (5)0.097*
C110.16370 (7)0.50014 (18)0.96079 (8)0.0281 (4)
C120.12062 (8)0.4739 (2)0.98395 (10)0.0405 (5)
H12A0.0857 (7)0.4938 (5)0.9542 (6)0.049*
C130.12841 (9)0.4190 (2)1.04989 (10)0.0486 (5)
H13A0.0996 (6)0.4028 (4)1.0647 (3)0.058*
C140.17909 (9)0.3886 (2)1.09350 (11)0.0517 (6)
H14A0.18455 (16)0.3523 (9)1.1397 (11)0.062*
C150.22194 (9)0.4102 (3)1.07079 (11)0.0575 (6)
H15A0.2541 (8)0.3883 (6)1.0982 (7)0.069*
C160.21459 (8)0.4665 (2)1.00490 (9)0.0425 (5)
H16A0.2438 (6)0.4818 (4)0.9902 (3)0.051*
C210.14139 (6)0.78746 (18)0.88138 (8)0.0268 (4)
C220.13023 (7)0.8756 (2)0.82090 (10)0.0350 (4)
H22A0.12774 (8)0.8242 (10)0.7772 (8)0.042*
C230.12265 (8)1.0355 (2)0.82236 (11)0.0422 (5)
H23A0.11515 (17)1.0970 (12)0.7799 (9)0.051*
C240.12570 (8)1.1079 (2)0.88404 (11)0.0473 (5)
H24A0.12009 (15)1.216 (2)0.88489 (11)0.057*
C250.13689 (8)1.0227 (2)0.94401 (11)0.0457 (5)
H25A0.13925 (9)1.0737 (11)0.9865 (9)0.055*
C260.14479 (7)0.8620 (2)0.94297 (10)0.0352 (4)
H26A0.15250 (16)0.8033 (11)0.9845 (8)0.042*
C310.20790 (7)0.55624 (18)0.84924 (8)0.0276 (4)
C320.20893 (8)0.4427 (2)0.80066 (9)0.0392 (5)
H32A0.1776 (6)0.3766 (13)0.7795 (4)0.047*
C330.25459 (8)0.4243 (3)0.78255 (11)0.0515 (6)
H33A0.25523 (9)0.3520 (18)0.7511 (8)0.062*
C340.29896 (8)0.5155 (3)0.81221 (10)0.0477 (5)
H34A0.3296 (7)0.5006 (4)0.8003 (3)0.057*
C350.29792 (8)0.6288 (2)0.85965 (10)0.0423 (5)
H35A0.3295 (6)0.6949 (14)0.8805 (4)0.051*
C360.25267 (7)0.6494 (2)0.87778 (9)0.0352 (4)
H36A0.25208 (7)0.7255 (16)0.9091 (6)0.042*
U11U22U33U12U13U23
P10.0270 (2)0.0250 (2)0.0231 (3)−0.00232 (18)0.00640 (19)−0.00216 (18)
O10.0400 (8)0.0444 (8)0.0621 (9)0.0031 (6)0.0167 (7)0.0007 (7)
O20.0374 (8)0.0594 (9)0.0420 (8)−0.0045 (6)0.0192 (6)−0.0049 (6)
O30.0497 (8)0.0438 (8)0.0514 (9)0.0081 (7)0.0195 (7)0.0000 (6)
O40.0513 (8)0.0565 (9)0.0254 (7)0.0014 (7)0.0097 (6)−0.0057 (6)
O50.0281 (6)0.0295 (6)0.0275 (6)−0.0044 (5)0.0049 (5)−0.0050 (5)
N10.0282 (9)0.0469 (10)0.0385 (10)0.0018 (7)0.0113 (7)−0.0041 (7)
N20.0327 (9)0.0480 (10)0.0259 (9)0.0065 (7)0.0026 (8)−0.0050 (7)
C10.0649 (16)0.0467 (14)0.0768 (17)−0.0003 (11)0.0192 (13)0.0018 (12)
C20.0311 (10)0.0512 (12)0.0218 (10)0.0021 (9)0.0070 (8)−0.0043 (8)
C30.0353 (10)0.0372 (11)0.0337 (11)−0.0056 (9)0.0132 (9)−0.0016 (8)
C40.0955 (19)0.0660 (15)0.0359 (13)−0.0054 (13)0.0262 (12)−0.0144 (11)
C110.0327 (10)0.0237 (9)0.0267 (10)−0.0028 (7)0.0082 (8)−0.0032 (7)
C120.0400 (11)0.0510 (12)0.0321 (11)0.0040 (9)0.0139 (9)0.0054 (9)
C130.0553 (14)0.0582 (14)0.0403 (13)0.0019 (10)0.0267 (11)0.0055 (10)
C140.0726 (17)0.0516 (13)0.0304 (12)−0.0028 (11)0.0164 (11)0.0101 (9)
C150.0484 (13)0.0737 (16)0.0383 (13)0.0008 (11)−0.0024 (10)0.0208 (11)
C160.0356 (11)0.0528 (13)0.0358 (12)−0.0052 (9)0.0072 (9)0.0093 (9)
C210.0253 (9)0.0258 (9)0.0281 (10)−0.0024 (7)0.0069 (7)−0.0027 (7)
C220.0389 (11)0.0325 (10)0.0332 (11)−0.0022 (8)0.0111 (8)0.0003 (8)
C230.0470 (12)0.0315 (10)0.0449 (12)−0.0027 (8)0.0107 (9)0.0071 (9)
C240.0483 (13)0.0252 (10)0.0635 (15)−0.0010 (8)0.0114 (11)−0.0041 (10)
C250.0508 (13)0.0366 (11)0.0453 (12)−0.0017 (9)0.0096 (10)−0.0170 (10)
C260.0385 (10)0.0324 (10)0.0310 (10)−0.0018 (8)0.0064 (8)−0.0052 (8)
C310.0301 (9)0.0279 (9)0.0234 (9)0.0005 (7)0.0071 (7)0.0016 (7)
C320.0411 (11)0.0403 (11)0.0368 (11)−0.0021 (9)0.0136 (9)−0.0076 (9)
C330.0575 (14)0.0564 (14)0.0464 (13)0.0051 (11)0.0251 (11)−0.0156 (10)
C340.0407 (12)0.0643 (14)0.0453 (13)0.0059 (10)0.0241 (10)0.0021 (11)
C350.0348 (11)0.0546 (12)0.0391 (12)−0.0064 (9)0.0142 (9)0.0012 (10)
C360.0375 (11)0.0391 (10)0.0306 (10)−0.0042 (8)0.0131 (8)−0.0052 (8)
P1—O51.4938 (11)C14—C151.373 (3)
P1—C311.8017 (17)C14—H14A0.9582
P1—C211.8056 (16)C15—C161.383 (3)
P1—C111.8058 (17)C15—H15A0.8729
O1—C21.342 (2)C16—H16A0.9271
O1—C11.433 (2)C21—C261.388 (2)
O2—C21.203 (2)C21—C221.395 (2)
O3—C31.209 (2)C22—C231.384 (2)
O4—C31.347 (2)C22—H22A0.9782
O4—C41.445 (2)C23—C241.383 (3)
N1—C21.352 (2)C23—H23A0.9780
N1—N21.386 (2)C24—C251.373 (3)
N1—H10.85 (2)C24—H24A0.9379
N2—C31.354 (2)C25—C261.391 (2)
N2—H20.832 (18)C25—H25A0.9546
C1—H1C0.9492C26—H26A0.9485
C1—H1B0.9492C31—C361.389 (2)
C1—H1A0.9492C31—C321.396 (2)
C4—H4C0.9539C32—C331.385 (3)
C4—H4B0.9539C32—H32A0.9810
C4—H4A0.9539C33—C341.375 (3)
C11—C161.385 (2)C33—H33A0.8962
C11—C121.389 (2)C34—C351.378 (3)
C12—C131.378 (3)C34—H34A0.9307
C12—H12A0.9422C35—C361.377 (2)
C13—C141.372 (3)C35—H35A0.9830
C13—H13A0.9187C36—H36A0.9161
O5—P1—C31112.56 (7)C15—C14—H14A120.1
O5—P1—C21112.97 (7)C14—C15—C16120.5 (2)
C31—P1—C21105.14 (7)C14—C15—H15A119.7
O5—P1—C11110.80 (7)C16—C15—H15A119.7
C31—P1—C11108.28 (8)C15—C16—C11120.22 (19)
C21—P1—C11106.73 (8)C15—C16—H16A119.9
C2—O1—C1115.29 (16)C11—C16—H16A119.9
C3—O4—C4115.36 (16)C26—C21—C22119.19 (16)
C2—N1—N2118.65 (16)C26—C21—P1123.23 (13)
C2—N1—H1122.3 (13)C22—C21—P1117.57 (13)
N2—N1—H1117.6 (13)C23—C22—C21120.35 (18)
C3—N2—N1121.10 (16)C23—C22—H22A119.8
C3—N2—H2115.9 (12)C21—C22—H22A119.8
N1—N2—H2114.3 (12)C24—C23—C22119.80 (19)
O1—C1—H1C109.5C24—C23—H23A120.1
O1—C1—H1B109.5C22—C23—H23A120.1
H1C—C1—H1B109.5C25—C24—C23120.46 (19)
O1—C1—H1A109.5C25—C24—H24A119.8
H1C—C1—H1A109.5C23—C24—H24A119.8
H1B—C1—H1A109.5C24—C25—C26120.04 (19)
O2—C2—O1125.67 (18)C24—C25—H25A120.0
O2—C2—N1125.44 (18)C26—C25—H25A120.0
O1—C2—N1108.86 (15)C21—C26—C25120.16 (18)
O3—C3—O4125.12 (17)C21—C26—H26A119.9
O3—C3—N2122.87 (17)C25—C26—H26A119.9
O4—C3—N2111.95 (16)C36—C31—C32119.02 (17)
O4—C4—H4C109.5C36—C31—P1120.98 (13)
O4—C4—H4B109.5C32—C31—P1120.00 (13)
H4C—C4—H4B109.5C33—C32—C31119.46 (18)
O4—C4—H4A109.5C33—C32—H32A120.3
H4C—C4—H4A109.5C31—C32—H32A120.3
H4B—C4—H4A109.5C34—C33—C32120.84 (19)
C16—C11—C12118.54 (16)C34—C33—H33A119.6
C16—C11—P1124.23 (14)C32—C33—H33A119.6
C12—C11—P1117.23 (13)C33—C34—C35119.90 (19)
C13—C12—C11120.77 (19)C33—C34—H34A120.0
C13—C12—H12A119.6C35—C34—H34A120.0
C11—C12—H12A119.6C36—C35—C34119.92 (19)
C14—C13—C12120.1 (2)C36—C35—H35A120.0
C14—C13—H13A119.9C34—C35—H35A120.0
C12—C13—H13A119.9C35—C36—C31120.85 (18)
C13—C14—C15119.8 (2)C35—C36—H36A119.6
C13—C14—H14A120.1C31—C36—H36A119.6
C2—N1—N2—C3−85.2 (2)O5—P1—C21—C22−58.38 (15)
C1—O1—C2—O2−3.3 (3)C31—P1—C21—C2264.74 (15)
C1—O1—C2—N1178.43 (16)C11—P1—C21—C22179.61 (13)
N2—N1—C2—O28.9 (3)C26—C21—C22—C230.0 (3)
N2—N1—C2—O1−172.85 (14)P1—C21—C22—C23178.68 (14)
C4—O4—C3—O32.5 (3)C21—C22—C23—C24−0.6 (3)
C4—O4—C3—N2−174.72 (16)C22—C23—C24—C250.8 (3)
N1—N2—C3—O3165.73 (17)C23—C24—C25—C26−0.6 (3)
N1—N2—C3—O4−17.0 (2)C22—C21—C26—C250.3 (3)
O5—P1—C11—C16138.93 (15)P1—C21—C26—C25−178.33 (14)
C31—P1—C11—C1615.04 (17)C24—C25—C26—C210.0 (3)
C21—P1—C11—C16−97.70 (16)O5—P1—C31—C36163.98 (13)
O5—P1—C11—C12−41.92 (15)C21—P1—C31—C3640.60 (16)
C31—P1—C11—C12−165.81 (13)C11—P1—C31—C36−73.19 (15)
C21—P1—C11—C1281.45 (14)O5—P1—C31—C32−16.60 (16)
C16—C11—C12—C131.5 (3)C21—P1—C31—C32−139.98 (14)
P1—C11—C12—C13−177.73 (15)C11—P1—C31—C32106.23 (15)
C11—C12—C13—C14−0.4 (3)C36—C31—C32—C330.7 (3)
C12—C13—C14—C15−1.2 (3)P1—C31—C32—C33−178.72 (14)
C13—C14—C15—C161.7 (3)C31—C32—C33—C340.5 (3)
C14—C15—C16—C11−0.7 (3)C32—C33—C34—C35−1.2 (3)
C12—C11—C16—C15−0.9 (3)C33—C34—C35—C360.7 (3)
P1—C11—C16—C15178.22 (16)C34—C35—C36—C310.5 (3)
O5—P1—C21—C26120.24 (14)C32—C31—C36—C35−1.2 (3)
C31—P1—C21—C26−116.65 (14)P1—C31—C36—C35178.21 (13)
C11—P1—C21—C26−1.77 (16)
D—H···AD—HH···AD···AD—H···A
N1—H1···O5i0.85 (2)2.05 (2)2.899 (2)174.2 (19)
N2—H2···O50.83 (2)2.05 (2)2.833 (2)155.9 (17)
C13—H13A···O2ii0.922.533.310 (3)143
C35—H35A···O3iii0.982.543.270 (3)131
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O5i0.85 (2)2.05 (2)2.899 (2)174.2 (19)
N2—H2⋯O50.83 (2)2.05 (2)2.833 (2)155.9 (17)
C13—H13A⋯O2ii0.922.533.310 (3)143
C35—H35A⋯O3iii0.982.543.270 (3)131

Symmetry codes: (i) ; (ii) ; (iii) .

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