Literature DB >> 21836970

Diaqua-bis-[1,2-bis-(pyridin-4-yl)ethene]-bis-[2-(4-carboxy-phen-yl)acetato]-cobalt(II).

Wei-Hua Yu1, Jian-Lan Liu, Xiao-Ming Ren.   

Abstract

The asymmetric unit of the title compound, [Co(C(9)H(7)O(4))(2)(C(12)H(10)N(2))(2)(H(2)O)(2)], consists of one Co(2+) ion, one mono-deprotonated 2-(4-carboxyl-atophen-yl)acetate carboxylic acid, one 1,2-bis-(pyridin-4-yl)ethane mol-ecule and one water mol-ecule. The Co(II) atom is situated on a crystallographic center of inversion and is octa-hedrally coordinated by two O atoms from two anions, two N atoms of two 1,2-bis-(pyridin-4-yl)ethane mol-ecules and two O atoms from two water mol-ecules. A three-dimensional network is established by inter-molecular O-H⋯O and O-H⋯N hydrogen bonds.

Entities:  

Year:  2011        PMID: 21836970      PMCID: PMC3152052          DOI: 10.1107/S1600536811024755

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the design of metal-organic supra­molecular solids with potential functionality, see: Moulton & Zaworotko (2001 ▶); Janiak (2003 ▶). For weak non-covalent inter­actions in supra­molecular solids, see: Hosseini (2005 ▶); Nishio (2004 ▶). For metal-organic supra­molecular frameworks based on organic connectors containing pyridyl and/or carboxyl­ate groups, see: Brammer (2004 ▶).

Experimental

Crystal data

[Co(C9H7O4)2(C12H10N2)2(H2O)2] M = 817.69 Monoclinic, a = 21.349 (5) Å b = 5.6522 (12) Å c = 15.659 (4) Å β = 98.999 (4)° V = 1866.3 (7) Å3 Z = 2 Mo Kα radiation μ = 0.53 mm−1 T = 293 K 0.40 × 0.30 × 0.10 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.850, T max = 0.874 9499 measured reflections 3635 independent reflections 2640 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.105 S = 1.06 3635 reflections 268 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.71 e Å−3 Δρmin = −0.36 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024755/im2300sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024755/im2300Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C9H7O4)2(C12H10N2)2(H2O)2]F(000) = 850
Mr = 817.69Dx = 1.455 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 870 reflections
a = 21.349 (5) Åθ = 2.6–22.1°
b = 5.6522 (12) ŵ = 0.53 mm1
c = 15.659 (4) ÅT = 293 K
β = 98.999 (4)°Plate, red
V = 1866.3 (7) Å30.40 × 0.30 × 0.10 mm
Z = 2
Bruker SMART CCD area-detector diffractometer3635 independent reflections
Radiation source: fine-focus sealed tube2640 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −26→23
Tmin = 0.850, Tmax = 0.874k = −6→6
9499 measured reflectionsl = −19→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.040P)2 + 0.440P] where P = (Fo2 + 2Fc2)/3
3635 reflections(Δ/σ)max < 0.001
268 parametersΔρmax = 0.71 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.13939 (13)0.6024 (5)0.07330 (17)0.0285 (6)
H10.13080.73880.04040.034*
C20.21300 (13)0.3771 (6)0.16945 (19)0.0324 (7)
C30.16536 (14)0.2132 (6)0.1675 (2)0.0418 (8)
H3A0.17270.07500.19970.050*
C40.19847 (13)0.5792 (5)0.11978 (18)0.0305 (7)
H40.22870.69690.11830.037*
C50.10794 (14)0.2501 (5)0.11927 (19)0.0360 (7)
H5A0.07710.13380.11940.043*
C60.27478 (13)0.3325 (6)0.2271 (2)0.0446 (8)
H60.28050.20170.26350.053*
C70.32607 (15)0.5046 (7)0.2236 (2)0.0542 (9)
H70.32130.63480.18680.065*
C80.38736 (14)0.4545 (6)0.2844 (2)0.0435 (8)
C90.43624 (15)0.6125 (7)0.2885 (2)0.0480 (9)
H90.43170.74910.25490.058*
C100.49294 (15)0.5670 (6)0.3433 (2)0.0418 (8)
H100.52630.67300.34390.050*
C110.45391 (15)0.2330 (6)0.3909 (2)0.0467 (9)
H110.45880.10170.42710.056*
C120.39688 (15)0.2605 (6)0.3370 (2)0.0476 (9)
H120.36510.14770.33630.057*
C250.09958 (12)0.8462 (5)−0.19283 (18)0.0311 (6)
H25A0.10550.7968−0.25040.037*
H25B0.07750.9968−0.19780.037*
C260.16362 (13)0.8760 (5)−0.13681 (18)0.0290 (6)
C270.17905 (14)1.0732 (5)−0.0867 (2)0.0333 (7)
H270.14971.1953−0.08810.040*
C280.23634 (15)1.0942 (6)−0.0351 (2)0.0422 (8)
H280.24461.2272−0.00020.051*
C290.28176 (14)0.9246 (6)−0.0335 (2)0.0387 (7)
C300.26777 (14)0.7226 (6)−0.0820 (2)0.0447 (8)
H300.29780.6031−0.08110.054*
C310.20875 (14)0.6992 (6)−0.1321 (2)0.0408 (8)
H310.19920.5607−0.16350.049*
C320.34424 (16)0.9532 (6)0.0221 (2)0.0494 (9)
C500.05974 (12)0.6632 (5)−0.15437 (17)0.0237 (6)
Co10.00000.50000.00000.02453 (15)
H5C−0.0226 (18)0.907 (7)0.078 (3)0.057 (13)*
H5D−0.0072 (15)0.719 (6)0.134 (2)0.049 (10)*
N10.09278 (10)0.4435 (4)0.07147 (14)0.0278 (5)
N20.50139 (12)0.3794 (5)0.39444 (17)0.0417 (6)
O10.03952 (8)0.7233 (3)−0.08597 (11)0.0252 (4)
O20.05249 (10)0.4649 (4)−0.18973 (14)0.0392 (5)
O30.38617 (10)0.7984 (4)0.00934 (15)0.0448 (6)
H30.41910.82320.04260.067*
O40.35646 (11)1.1161 (4)0.07192 (15)0.0506 (6)
O5−0.00449 (10)0.7965 (4)0.07875 (14)0.0308 (5)
U11U22U33U12U13U23
C10.0255 (14)0.0263 (14)0.0317 (15)−0.0001 (11)−0.0015 (11)0.0051 (12)
C20.0228 (15)0.0414 (18)0.0314 (15)0.0045 (12)−0.0004 (12)−0.0013 (13)
C30.0411 (17)0.0279 (17)0.052 (2)−0.0034 (14)−0.0078 (14)0.0124 (15)
C40.0254 (14)0.0280 (16)0.0360 (16)−0.0053 (11)−0.0017 (12)0.0017 (12)
C50.0329 (15)0.0323 (17)0.0372 (17)−0.0017 (13)−0.0112 (12)0.0083 (13)
C60.0238 (16)0.050 (2)0.056 (2)0.0032 (14)−0.0049 (14)0.0141 (17)
C70.0407 (18)0.056 (2)0.061 (2)−0.0067 (18)−0.0091 (15)0.023 (2)
C80.0303 (16)0.043 (2)0.055 (2)−0.0009 (14)−0.0020 (13)0.0019 (15)
C90.0383 (19)0.050 (2)0.053 (2)−0.0036 (15)−0.0021 (15)0.0131 (17)
C100.0357 (17)0.042 (2)0.0446 (19)−0.0083 (14)−0.0035 (14)−0.0042 (14)
C110.0469 (19)0.0385 (19)0.0453 (19)−0.0024 (15)−0.0222 (15)0.0135 (15)
C120.0373 (18)0.051 (2)0.048 (2)−0.0097 (16)−0.0121 (15)0.0094 (17)
C250.0254 (14)0.0341 (17)0.0340 (15)−0.0005 (12)0.0056 (12)0.0059 (13)
C260.0241 (14)0.0337 (16)0.0301 (15)−0.0018 (12)0.0069 (11)−0.0003 (12)
C270.0326 (16)0.0210 (16)0.0469 (18)0.0048 (11)0.0086 (13)0.0006 (12)
C280.0408 (19)0.0344 (18)0.054 (2)−0.0039 (14)0.0135 (15)−0.0099 (15)
C290.0296 (15)0.044 (2)0.0424 (17)−0.0057 (13)0.0056 (13)−0.0033 (14)
C300.0256 (15)0.052 (2)0.054 (2)0.0122 (15)−0.0021 (13)−0.0096 (17)
C310.0404 (17)0.0326 (17)0.0480 (19)0.0022 (14)0.0024 (14)−0.0182 (14)
C320.0381 (18)0.053 (2)0.054 (2)−0.0008 (16)−0.0024 (15)−0.0161 (18)
C500.0207 (12)0.0236 (15)0.0258 (13)0.0028 (11)0.0003 (10)0.0029 (11)
Co10.0269 (3)0.0223 (3)0.0237 (3)0.0004 (2)0.00182 (19)0.0014 (2)
N10.0252 (12)0.0271 (13)0.0307 (12)0.0007 (9)0.0033 (9)0.0002 (9)
N20.0315 (14)0.0433 (16)0.0461 (16)0.0071 (12)−0.0069 (12)−0.0035 (13)
O10.0242 (9)0.0268 (10)0.0264 (10)−0.0013 (8)0.0093 (8)0.0018 (8)
O20.0491 (13)0.0258 (12)0.0478 (13)−0.0078 (10)0.0238 (10)−0.0055 (9)
O30.0347 (12)0.0444 (14)0.0466 (13)0.0077 (11)−0.0200 (10)−0.0051 (11)
O40.0511 (15)0.0463 (14)0.0473 (14)0.0075 (11)−0.0141 (11)−0.0127 (12)
O50.0390 (11)0.0199 (11)0.0365 (12)0.0029 (9)0.0150 (9)0.0008 (9)
C1—N11.338 (3)C25—H25A0.9700
C1—C41.360 (4)C25—H25B0.9700
C1—H10.9300C26—C271.373 (4)
C2—C31.373 (4)C26—C311.382 (4)
C2—C41.389 (4)C27—C281.362 (4)
C2—C61.498 (4)C27—H270.9300
C3—C51.352 (4)C28—C291.361 (4)
C3—H3A0.9300C28—H280.9300
C4—H40.9300C29—C301.378 (5)
C5—N11.335 (4)C29—C321.483 (4)
C5—H5A0.9300C30—C311.383 (4)
C6—C71.472 (5)C30—H300.9300
C6—H60.9300C31—H310.9300
C7—C81.520 (4)C32—O41.209 (4)
C7—H70.9300C32—O31.290 (4)
C8—C121.367 (5)C50—O21.249 (3)
C8—C91.367 (5)C50—O11.262 (3)
C9—C101.394 (4)Co1—O52.092 (2)
C9—H90.9300Co1—O5i2.092 (2)
C10—N21.324 (4)Co1—O1i2.1149 (17)
C10—H100.9300Co1—O12.1149 (17)
C11—N21.303 (4)Co1—N1i2.141 (2)
C11—C121.378 (4)Co1—N12.141 (2)
C11—H110.9300O3—H30.8200
C12—H120.9300O5—H5C0.73 (4)
C25—C261.514 (4)O5—H5D0.98 (4)
C25—C501.522 (4)
N1—C1—C4124.8 (3)C28—C27—C26121.5 (3)
N1—C1—H1117.6C28—C27—H27119.2
C4—C1—H1117.6C26—C27—H27119.2
C3—C2—C4116.3 (3)C29—C28—C27121.4 (3)
C3—C2—C6118.6 (3)C29—C28—H28119.3
C4—C2—C6125.0 (3)C27—C28—H28119.3
C5—C3—C2120.8 (3)C28—C29—C30118.7 (3)
C5—C3—H3A119.6C28—C29—C32120.5 (3)
C2—C3—H3A119.6C30—C29—C32120.8 (3)
C1—C4—C2119.1 (3)C29—C30—C31119.5 (3)
C1—C4—H4120.5C29—C30—H30120.3
C2—C4—H4120.5C31—C30—H30120.3
N1—C5—C3124.0 (3)C26—C31—C30121.8 (3)
N1—C5—H5A118.0C26—C31—H31119.1
C3—C5—H5A118.0C30—C31—H31119.1
C7—C6—C2117.1 (3)O4—C32—O3122.1 (3)
C7—C6—H6121.4O4—C32—C29123.0 (3)
C2—C6—H6121.4O3—C32—C29114.7 (3)
C6—C7—C8115.2 (3)O2—C50—O1125.6 (2)
C6—C7—H7122.4O2—C50—C25118.2 (2)
C8—C7—H7122.4O1—C50—C25116.1 (2)
C12—C8—C9117.1 (3)O5—Co1—O5i180.00 (10)
C12—C8—C7124.0 (3)O5—Co1—O1i92.48 (8)
C9—C8—C7118.9 (3)O5i—Co1—O1i87.52 (8)
C8—C9—C10119.4 (3)O5—Co1—O187.52 (8)
C8—C9—H9120.3O5i—Co1—O192.48 (8)
C10—C9—H9120.3O1i—Co1—O1180.00 (7)
N2—C10—C9122.9 (3)O5—Co1—N1i93.70 (9)
N2—C10—H10118.5O5i—Co1—N1i86.30 (9)
C9—C10—H10118.5O1i—Co1—N1i89.61 (8)
N2—C11—C12124.1 (3)O1—Co1—N1i90.39 (8)
N2—C11—H11117.9O5—Co1—N186.30 (9)
C12—C11—H11117.9O5i—Co1—N193.70 (9)
C8—C12—C11119.6 (3)O1i—Co1—N190.39 (8)
C8—C12—H12120.2O1—Co1—N189.61 (8)
C11—C12—H12120.2N1i—Co1—N1180.00 (13)
C26—C25—C50110.9 (2)C5—N1—C1115.0 (2)
C26—C25—H25A109.5C5—N1—Co1122.57 (19)
C50—C25—H25A109.5C1—N1—Co1122.36 (19)
C26—C25—H25B109.5C11—N2—C10116.8 (3)
C50—C25—H25B109.5C50—O1—Co1127.08 (17)
H25A—C25—H25B108.1C32—O3—H3109.5
C27—C26—C31117.0 (3)Co1—O5—H5C138 (3)
C27—C26—C25122.4 (3)Co1—O5—H5D100 (2)
C31—C26—C25120.6 (3)H5C—O5—H5D107 (3)
D—H···AD—HH···AD···AD—H···A
O5—H5C···O1ii0.73 (4)2.13 (4)2.822 (3)158 (4)
O5—H5D···O2i0.98 (4)1.74 (4)2.610 (3)145 (3)
O3—H3···N2iii0.821.852.667 (3)173.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5C⋯O1i0.73 (4)2.13 (4)2.822 (3)158 (4)
O5—H5D⋯O2ii0.98 (4)1.74 (4)2.610 (3)145 (3)
O3—H3⋯N2iii0.821.852.667 (3)173

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  From molecules to crystal engineering: supramolecular isomerism and polymorphism in network solids.

Authors:  B Moulton; M J Zaworotko
Journal:  Chem Rev       Date:  2001-06       Impact factor: 60.622

2.  Developments in inorganic crystal engineering.

Authors:  Lee Brammer
Journal:  Chem Soc Rev       Date:  2004-09-24       Impact factor: 54.564

3.  Molecular tectonics: from simple tectons to complex molecular networks.

Authors:  Mir Wais Hosseini
Journal:  Acc Chem Res       Date:  2005-04       Impact factor: 22.384

4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  4 in total

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