Literature DB >> 21836945

Tris(6-carb-oxy-pyridine-2-carboxyl-ato)terbium(III) 2.75-hydrate.

Soumaila Zebret, Céline Besnard, Josef Hamacek.   

Abstract

In the title compound, [Tb(C(7)H(4)NO(4))(3)]·2.75H(2)O, the Tb(3+) atom is coordinated by three tridentate 6-carb-oxy-pyridine-2-carboxyl-ate ligands and lies on a crystallographic threefold rotation axis. The coordination polyhedron around Tb(III) adopts a distorted tricapped trigonal-prismatic geometry. Disordered water mol-ecules with partial occupancy are also present in the crystal, one of which is associated with each of the carboxyl-ate O atoms of the complex unit.

Entities:  

Year:  2011        PMID: 21836945      PMCID: PMC3151876          DOI: 10.1107/S1600536811024135

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details of the synthesis, see: Zebret et al. (2009 ▶). For related structures, see: D’Aléo, et al. (2007 ▶, 2008 ▶); Borthwick (1980 ▶); Albertsson (1970 ▶); Hamacek et al. (2009 ▶). For isotypic structures, see: Brayshaw et al. (2005 ▶); Chen et al. (2002 ▶); Iwamura et al. (2007 ▶); Lunstroot et al. (2009 ▶); Pompidor et al. (2008 ▶); Shengzhi et al. (1989 ▶); Van Meervelt et al. (1997 ▶). For the Squeeze/bypass procedure, see: van der Sluis & Spek (1990 ▶). For a description of the Cambridge Structural Database, see: Allen (2002) ▶.

Experimental

Crystal data

[Tb(C7H4NO4)3]·2.75H2O M = 706.79 Trigonal, a = 13.0115 (15) Å c = 9.4142 (13) Å V = 1380.3 (5) Å3 Z = 2 Mo Kα radiation μ = 2.63 mm−1 T = 200 K 0.15 × 0.10 × 0.05 mm

Data collection

Stoe IPDS diffractometer Absorption correction: Gaussian (Busing & Levy, 1957 ▶) T min = 0.72, T max = 0.88 3830 measured reflections 1569 independent reflections 1464 reflections with I > 2.0σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.082 S = 1.00 1566 reflections 122 parameters 1 restraint H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −1.01 e Å−3 Absolute structure: Flack (1983 ▶), 679 Friedel pairs Flack parameter: −0.05 (2) Data collection: IPDS (Stoe & Cie, 1996 ▶); cell refinement: IPDS; data reduction: X-RED (Stoe & Cie 1996 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: CAMERON (Watkin et al., 1996) ▶; software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024135/zs2104sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024135/zs2104Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Tb(C7H4NO4)3]·2.75H2ODx = 1.701 Mg m3
Mr = 706.79Mo Kα radiation, λ = 0.71073 Å
Trigonal, P31cCell parameters from 4000 reflections
Hall symbol: P 3 -2cθ = 2.8–32.1°
a = 13.0115 (15) ŵ = 2.63 mm1
c = 9.4142 (13) ÅT = 200 K
V = 1380.3 (5) Å3Prism, colourless
Z = 20.15 × 0.10 × 0.05 mm
F(000) = 694.85
Stoe IPDS diffractometer1464 reflections with I > 2.0σ(I)
graphiteRint = 0.035
ω scansθmax = 25.8°, θmin = 2.8°
Absorption correction: gaussian (Busing & Levy, 1957)h = −13→15
Tmin = 0.72, Tmax = 0.88k = −12→15
3830 measured reflectionsl = −10→11
1569 independent reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.037w = 1/[σ2(Fo2) + (0.03P)2 + 8.38P] where P = (max(Fo2,0) + 2Fc2)/3
wR(F2) = 0.082(Δ/σ)max = 0.009
S = 1.00Δρmax = 0.57 e Å3
1566 reflectionsΔρmin = −1.01 e Å3
122 parametersAbsolute structure: Flack (1983), 679 Friedel pairs: the crystal is achiral.
1 restraintFlack parameter: −0.05 (2)
Primary atom site location: structure-invariant direct methods
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems open-flow nitrogen cryostat (Cosier & Glazer, 1986) with a nominal stability of 0.1 K.Cosier, J. & Glazer, A.M., 1986. J. Appl. Cryst. 105 107.
xyzUiso*/UeqOcc. (<1)
Tb10.33330.66670.38705 (17)0.0281
O20.4896 (5)0.7887 (6)0.2190 (6)0.0368
C30.5468 (8)0.9002 (8)0.2214 (10)0.0390
O40.6394 (7)0.9631 (7)0.1429 (9)0.0940
C50.5045 (7)0.9629 (7)0.3171 (8)0.0342
N60.4104 (5)0.8890 (6)0.3959 (7)0.0284
C70.3641 (7)0.9320 (8)0.4896 (9)0.0310
C80.2606 (7)0.8377 (8)0.5728 (8)0.0345
O90.2404 (5)0.7332 (5)0.5607 (6)0.0366
O100.2028 (7)0.8686 (6)0.6551 (8)0.0659
C110.4116 (7)1.0542 (7)0.5101 (9)0.0392
C120.5099 (9)1.1317 (8)0.4296 (10)0.0450
C130.5560 (8)1.0869 (8)0.3313 (9)0.0412
H1110.37841.08220.57480.0471*
H1210.54421.21280.44130.0541*
H1310.62091.13810.27630.0490*
O170.2402 (15)0.1736 (16)0.4073 (16)0.07950.5000
U11U22U33U12U13U23
Tb10.02359 (17)0.02359 (17)0.0372 (3)0.01180 (8)0.00000.0000
O20.032 (3)0.034 (4)0.045 (3)0.017 (3)0.008 (2)−0.002 (3)
C30.031 (5)0.032 (5)0.040 (5)0.006 (4)0.009 (4)−0.002 (4)
O40.066 (6)0.060 (5)0.119 (7)0.003 (4)0.049 (5)−0.016 (5)
C50.032 (4)0.028 (4)0.035 (4)0.009 (3)0.002 (3)0.001 (3)
N60.025 (3)0.032 (3)0.028 (3)0.015 (3)0.005 (3)0.000 (3)
C70.027 (5)0.028 (4)0.037 (5)0.012 (4)−0.001 (3)0.003 (3)
C80.025 (4)0.037 (5)0.043 (5)0.017 (4)0.004 (3)0.000 (3)
O90.031 (3)0.026 (3)0.048 (3)0.011 (3)0.013 (3)0.007 (3)
O100.064 (5)0.053 (4)0.087 (5)0.034 (4)0.035 (4)0.011 (4)
C110.041 (5)0.030 (4)0.048 (5)0.019 (4)0.001 (3)−0.005 (3)
C120.047 (5)0.026 (5)0.052 (6)0.011 (4)0.003 (4)−0.009 (4)
C130.034 (5)0.024 (4)0.055 (5)0.007 (4)0.008 (4)0.004 (4)
O170.071 (11)0.098 (13)0.071 (10)0.043 (10)−0.007 (8)−0.044 (9)
Tb1—N6i2.545 (6)C5—N61.340 (9)
Tb1—N6ii2.545 (6)C5—C131.410 (12)
Tb1—O9ii2.436 (6)N6—C71.338 (11)
Tb1—O9i2.436 (6)C7—C81.510 (11)
Tb1—O2i2.435 (6)C7—C111.402 (11)
Tb1—O2ii2.435 (6)C8—O91.253 (10)
Tb1—O22.435 (6)C8—O101.277 (10)
Tb1—N62.545 (6)C11—C121.392 (12)
Tb1—O92.436 (6)C11—H1110.921
O2—C31.257 (11)C12—C131.381 (12)
C3—O41.297 (11)C12—H1210.924
C3—C51.494 (12)C13—H1310.929
N6i—Tb1—N6ii119.893 (19)O2ii—Tb1—N674.7 (2)
N6i—Tb1—O9ii70.1 (2)O2—Tb1—N663.52 (19)
N6ii—Tb1—O9ii63.73 (19)O2ii—Tb1—O983.45 (18)
N6i—Tb1—O9i63.73 (19)O2—Tb1—O9127.2 (2)
N6ii—Tb1—O9i135.8 (2)N6—Tb1—O963.73 (19)
O9ii—Tb1—O9i79.9 (2)Tb1—O2—C3124.1 (5)
N6i—Tb1—O2i63.52 (19)O2—C3—O4123.1 (8)
N6ii—Tb1—O2i74.7 (2)O2—C3—C5118.3 (7)
O9ii—Tb1—O2i83.45 (18)O4—C3—C5118.6 (8)
O9i—Tb1—O2i127.2 (2)C3—C5—N6113.3 (7)
N6i—Tb1—O2ii140.7 (2)C3—C5—C13126.0 (7)
N6ii—Tb1—O2ii63.52 (19)N6—C5—C13120.7 (8)
O9ii—Tb1—O2ii127.2 (2)Tb1—N6—C5119.8 (5)
O9i—Tb1—O2ii144.8 (2)Tb1—N6—C7119.5 (5)
O2i—Tb1—O2ii82.3 (2)C5—N6—C7120.3 (7)
N6i—Tb1—O274.7 (2)N6—C7—C8114.0 (7)
N6ii—Tb1—O2140.7 (2)N6—C7—C11122.0 (8)
O9ii—Tb1—O2144.8 (2)C8—C7—C11123.9 (8)
O9i—Tb1—O283.45 (18)C7—C8—O9116.9 (7)
O2i—Tb1—O282.3 (2)C7—C8—O10119.0 (8)
N6i—Tb1—N6119.893 (19)O9—C8—O10124.0 (7)
N6ii—Tb1—N6119.893 (18)Tb1—O9—C8125.0 (5)
O9ii—Tb1—N6135.8 (2)C7—C11—C12118.1 (8)
O9i—Tb1—N670.1 (2)C7—C11—H111120.8
O2i—Tb1—N6140.7 (2)C12—C11—H111121.0
N6i—Tb1—O9135.8 (2)C11—C12—C13119.6 (8)
N6ii—Tb1—O970.1 (2)C11—C12—H121120.4
O9ii—Tb1—O979.9 (2)C13—C12—H121119.9
O9i—Tb1—O979.9 (2)C5—C13—C12119.2 (7)
O2i—Tb1—O9144.8 (2)C5—C13—H131120.7
O2ii—Tb1—O282.3 (2)C12—C13—H131120.1
D—H···AD—HH···AD···AD—H···A
C13—H131···O9iii0.932.473.345 (13)158
Space groupCounter-iond(Tb-N)d(Tb-O1)d(Tb-O2)
P-1[Co(NH3)6]3+a2.5092.4162.446
2.4952.4282.428
2.4922.4082.419
P-1[N(CH2CH2NH3)]3+b2.4922.3982.431
2.5092.3932.448
2.4992.4282.435
P-1[(NH2)2CNHCH2CH3)]+c2.5002.4032.410
2.4912.4022.429
2.5442.3832.453
P21[Co(NH2CH2CH2NH2)3]3+d2.5332.4122.418
2.5052.4132.440
2.5082.4172.431
2.5052.4182.432
2.5122.4322.441
2.4862.4022.423
P21/cNa+e2.5042.4062.415
2.5092.4242.429
2.5052.4102.439
C2/c[Co(NH2CH2CH2NH2)3]3+d2.4862.4002.423
2.5092.4192.429
2.5182.4072.416
P31cH+f2.5482.4262.436
2.5472.4262.435
2.5462.4252.435
R-3c[(CH3)3NCH2CH2OH)]+g2.4972.4012.405
2.4962.4012.404
2.4972.4022.405
P-62cNa+, ClO4-h2.4892.4002.400
Table 1

Selected bond lengths (Å)

Tb1—O22.435 (6)
Tb1—N62.545 (6)
Tb1—O92.436 (6)

Symmetry codes: (i) ; (ii) .

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