Literature DB >> 21836936

catena-[[(nitrato-κO)silver(I)]-μ-1,10-phenanthroline-5,6-dione-κO,O':N,N'].

Xiao Jing, Yu-Lan Zhu, Kui-Rong Ma, Li Cao, Shuai Shao.   

Abstract

In the title one-dimensional coordination polymer, [Ag(n class="Chemical">NO(3))(C(12)H(6)N(2)O(2))](n), the Ag(I) atom is penta-coordinated by two N atoms from a 1,10-phenanthroline-5,6-dione (phen-dione) ligand, one O atom from the nitrate anion and two O atoms from another phen-dione ligand. The coordination environment around silver is slightly distorted square-pyramidal. Inter-estingly, the Ag-O distances to the phen-dione ligand are different [Ag-O = 2.612 (6) and 2.470 (5) Å]. The one-dimensional chains run parallel to [101] and are further inter-connected by weak hydrogen bonds (C-H⋯O) and π-π stacking inter-actions [centroid-centroid distances 3.950 (4) and 3.792 (4) Å], forming a three-dimensional supra-molecular network.

Entities:  

Year:  2011        PMID: 21836936      PMCID: PMC3151901          DOI: 10.1107/S1600536811020939

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of 1,10-phenanthroline-5,6-dione (n class="Chemical">phen-dione) as an efficient chelating ligand establishing coordination polymers, see: Calderazzo et al. (2002 ▶); Wu et al. (1996 ▶); Liu & Xu (2006 ▶); Li et al. (2005 ▶). For examples of complexes with N,O-coordination of phen-dione, see: Paw & Eisenberg (1997 ▶); Ruiz et al. (1999 ▶); Shavaleev et al. (2003 ▶). For the synthesis of phen-dione, see: Paw & Eisenberg (1997 ▶). For the structure of a related phen-dione complex of AgI, see: Onuegbu et al. (2009 ▶). For a comparison of Ag—O bond lengths, see: Young & Hanton (2008 ▶); Sun et al. (2010 ▶); Wang et al. (2011 ▶).

Experimental

Crystal data

[Ag(NO3)(C12H6N2O2)] M = 380.07 Monoclinic, a = 9.5058 (14) Å b = 10.4647 (15) Å c = 12.1615 (17) Å β = 99.766 (2)° V = 1192.2 (3) Å3 Z = 4 Mo Kα radiation μ = 1.72 mm−1 T = 296 K 0.3 × 0.2 × 0.1 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.66, T max = 0.84 6626 measured reflections 2307 independent reflections 1374 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.124 S = 1.00 2307 reflections 190 parameters 32 restraints H-atom parameters constrained Δρmax = 0.84 e Å−3 Δρmin = −1.05 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811020939/im2282sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811020939/im2282Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag(NO3)(C12H6N2O2)]F(000) = 744
Mr = 380.07Dx = 2.117 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1252 reflections
a = 9.5058 (14) Åθ = 2.6–22.6°
b = 10.4647 (15) ŵ = 1.72 mm1
c = 12.1615 (17) ÅT = 296 K
β = 99.766 (2)°Block, yellow
V = 1192.2 (3) Å30.3 × 0.2 × 0.1 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2307 independent reflections
Radiation source: fine-focus sealed tube1374 reflections with I > 2σ(I)
graphiteRint = 0.041
Detector resolution: 0 pixels mm-1θmax = 26.0°, θmin = 2.6°
φ and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker 2000)k = −12→12
Tmin = 0.66, Tmax = 0.84l = −14→7
6626 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0445P)2 + 3.5057P] where P = (Fo2 + 2Fc2)/3
2307 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.84 e Å3
32 restraintsΔρmin = −1.05 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ag10.20025 (7)0.15378 (7)0.49084 (6)0.0703 (3)
C10.3824 (8)−0.0492 (8)0.3745 (6)0.055 (2)
H10.3348−0.10650.41360.066*
C20.4710 (9)−0.0969 (8)0.3058 (7)0.060 (2)
H20.4815−0.18460.29810.072*
C30.5436 (8)−0.0134 (7)0.2488 (6)0.0489 (19)
H30.6034−0.04370.20150.059*
C40.5264 (7)0.1159 (6)0.2628 (6)0.0399 (17)
C50.6048 (7)0.2087 (6)0.2031 (6)0.0449 (18)
C60.5831 (7)0.3489 (6)0.2189 (5)0.0416 (16)
C70.4826 (7)0.3887 (7)0.2938 (5)0.0391 (17)
C80.4591 (7)0.5165 (7)0.3107 (6)0.0485 (19)
H80.50580.57870.27580.058*
C90.3654 (8)0.5503 (8)0.3800 (6)0.053 (2)
H90.34600.63580.39180.064*
C100.3008 (8)0.4552 (8)0.4318 (6)0.056 (2)
H100.23930.47900.48010.067*
C110.4114 (7)0.2975 (6)0.3479 (5)0.0356 (16)
C120.4337 (7)0.1596 (7)0.3331 (5)0.0380 (15)
N10.3214 (6)0.3316 (6)0.4165 (5)0.0439 (14)
N20.3618 (6)0.0775 (6)0.3874 (5)0.0424 (14)
N3−0.1319 (8)0.2293 (8)0.4504 (7)0.0784 (15)
O10.6449 (5)0.4259 (5)0.1699 (4)0.0567 (14)
O20.6867 (6)0.1721 (5)0.1428 (5)0.0708 (17)
O3−0.0348 (6)0.2265 (7)0.3995 (6)0.0846 (15)
O4−0.1158 (8)0.1860 (9)0.5450 (7)0.126 (2)
O5−0.2488 (6)0.2729 (7)0.4152 (5)0.0896 (18)
U11U22U33U12U13U23
Ag10.0779 (5)0.0783 (5)0.0691 (5)0.0005 (4)0.0539 (4)−0.0004 (4)
C10.062 (5)0.052 (5)0.057 (5)−0.006 (4)0.027 (4)0.012 (4)
C20.066 (5)0.047 (5)0.071 (6)0.003 (4)0.023 (5)0.004 (4)
C30.048 (4)0.052 (5)0.051 (5)0.008 (4)0.017 (4)−0.006 (4)
C40.040 (4)0.042 (4)0.040 (4)0.007 (3)0.016 (3)−0.004 (3)
C50.047 (4)0.052 (5)0.041 (4)0.001 (3)0.022 (4)0.001 (3)
C60.040 (4)0.053 (4)0.035 (4)−0.006 (4)0.015 (3)0.002 (4)
C70.040 (4)0.047 (4)0.034 (4)−0.003 (3)0.016 (3)0.001 (3)
C80.053 (4)0.046 (5)0.051 (5)−0.002 (4)0.020 (4)0.004 (4)
C90.069 (5)0.042 (4)0.053 (5)0.009 (4)0.019 (4)−0.004 (4)
C100.062 (5)0.064 (6)0.048 (5)0.012 (4)0.027 (4)−0.002 (4)
C110.038 (4)0.042 (4)0.029 (4)0.005 (3)0.013 (3)−0.004 (3)
C120.036 (3)0.045 (4)0.035 (4)−0.003 (3)0.011 (3)−0.003 (3)
N10.045 (3)0.045 (4)0.047 (4)0.003 (3)0.024 (3)−0.002 (3)
N20.044 (3)0.042 (4)0.045 (3)0.001 (3)0.019 (3)0.003 (3)
N30.054 (3)0.111 (4)0.077 (3)0.003 (3)0.029 (3)0.021 (3)
O10.059 (3)0.058 (3)0.062 (3)−0.008 (3)0.034 (3)0.002 (3)
O20.088 (4)0.066 (4)0.075 (4)0.012 (3)0.062 (3)0.003 (3)
O30.061 (3)0.108 (4)0.092 (3)0.006 (3)0.036 (3)0.009 (3)
O40.095 (4)0.188 (5)0.092 (4)−0.022 (4)0.012 (3)0.058 (4)
O50.059 (3)0.131 (5)0.078 (4)0.022 (3)0.010 (3)−0.017 (3)
Ag1—N22.287 (5)C6—C71.487 (8)
Ag1—O32.442 (6)C7—C81.377 (10)
Ag1—N12.442 (6)C7—C111.397 (9)
Ag1—O1i2.470 (5)C8—C91.372 (10)
C1—N21.354 (10)C8—H80.9300
C1—C21.376 (10)C9—C101.376 (10)
C1—H10.9300C9—H90.9300
C2—C31.372 (10)C10—N11.326 (9)
C2—H20.9300C10—H100.9300
C3—C41.377 (9)C11—N11.341 (7)
C3—H30.9300C11—C121.474 (10)
C4—C121.405 (8)C12—N21.340 (8)
C4—C51.486 (9)N3—O31.195 (8)
C5—O21.218 (7)N3—O51.210 (9)
C5—C61.499 (7)N3—O41.222 (9)
C6—O11.211 (7)O1—Ag1ii2.470 (5)
N2—Ag1—O3120.4 (2)C9—C8—C7118.7 (7)
N2—Ag1—N170.10 (19)C9—C8—H8120.6
O3—Ag1—N192.7 (2)C7—C8—H8120.6
N2—Ag1—O1i129.06 (19)C8—C9—C10118.8 (7)
O3—Ag1—O1i101.00 (18)C8—C9—H9120.6
N1—Ag1—O1i140.18 (19)C10—C9—H9120.6
N2—C1—C2122.8 (7)N1—C10—C9123.5 (6)
N2—C1—H1118.6N1—C10—H10118.2
C2—C1—H1118.6C9—C10—H10118.2
C1—C2—C3119.2 (7)N1—C11—C7121.5 (6)
C1—C2—H2120.4N1—C11—C12117.2 (6)
C3—C2—H2120.4C7—C11—C12121.3 (6)
C2—C3—C4118.9 (7)N2—C12—C4121.1 (6)
C2—C3—H3120.6N2—C12—C11118.1 (5)
C4—C3—H3120.6C4—C12—C11120.8 (6)
C3—C4—C12119.7 (7)C10—N1—C11118.2 (6)
C3—C4—C5120.1 (6)C10—N1—Ag1127.0 (4)
C12—C4—C5120.2 (6)C11—N1—Ag1114.7 (4)
O2—C5—C4120.9 (6)C12—N2—C1118.3 (6)
O2—C5—C6120.0 (6)C12—N2—Ag1119.6 (4)
C4—C5—C6119.1 (5)C1—N2—Ag1122.0 (4)
O1—C6—C7122.1 (6)O3—N3—O5124.7 (9)
O1—C6—C5119.9 (6)O3—N3—O4119.6 (9)
C7—C6—C5118.0 (6)O5—N3—O4115.7 (8)
C8—C7—C11119.3 (6)C6—O1—Ag1ii113.8 (4)
C8—C7—C6120.0 (6)N3—O3—Ag1120.0 (6)
C11—C7—C6120.7 (6)
D—H···AD—HH···AD···AD—H···A
C1—H1···O4iii0.932.373.21 (1)149.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O4i0.932.373.21 (1)149

Symmetry code: (i) .

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