Literature DB >> 21836907

(Dimethyl sulfoxide-κO)trimeth-yl(2-methyl-3,5-dinitro-benzoato-κO)tin(IV).

Muhammed Danish, Sabiha Ghafoor, Nazir Ahmad, Wojciech Starosta, Janusz Leciejewicz.   

Abstract

In the title mononuclear complex, [Sn(CH(3))(3)(C(7)H(5)N(2)O(6))(C(2)H(6)OS)], the Sn(IV) ion is coordinated by three methyl groups in the equatorial plane, and by an O atom from a 2-methyl-3,5-dinitrobenzoate ligand and a dimethyl sulfoxide ligand in the axial sites, to form a slightly distorted trigonal-bipyramidal environment. The O atoms of one of the nitro groups are disordered over two sets of sites, with refined occupancies of 0.55 (4) and 0.45 (4). The closest inter-molecular inter-action is a weak C-H⋯O hydrogen bond.

Entities:  

Year:  2011        PMID: 21836907      PMCID: PMC3151753          DOI: 10.1107/S1600536811022240

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of trimethytin complexes, see: Gielen et al. (2005 ▶); Gielen (2002 ▶); Hameed et al. (2009 ▶); Ashhad et al. (2005 ▶). For the structure of a trimethyl­tin complex with a 2-methyl­benzene-3-carboxyl­ate ligand, see: Danish et al. (2010 ▶). For the structure of a triphenyl­tin complex with 2-methyl-3,5-dinitro­benzene carboxyl­ate and methanol ligands, see: Danish et al. (2011 ▶).

Experimental

Crystal data

[Sn(CH3)3(C7H5N2O6)(C2H6OS)] M = 467.06 Monoclinic, a = 9.6180 (19) Å b = 12.971 (3) Å c = 15.612 (3) Å β = 102.98 (3)° V = 1897.9 (7) Å3 Z = 4 Mo Kα radiation μ = 1.49 mm−1 T = 293 K 0.42 × 0.24 × 0.08 mm

Data collection

Kuma KM-4 four-circle diffractometer Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008 ▶) T min = 0.753, T max = 0.890 4755 measured reflections 4500 independent reflections 2464 reflections with I > 2σ(I) R int = 0.030 3 standard reflections every 200 reflections intensity decay: 0.2%

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.144 S = 1.01 4500 reflections 242 parameters 4 restraints H-atom parameters constrained Δρmax = 1.55 e Å−3 Δρmin = −1.86 e Å−3 Data collection: KM-4 Software (Kuma, 1996 ▶); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811022240/lh5258sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022240/lh5258Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(CH3)3(C7H5N2O6)(C2H6OS)]F(000) = 936
Mr = 467.06Dx = 1.635 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 9.6180 (19) Åθ = 6–15°
b = 12.971 (3) ŵ = 1.49 mm1
c = 15.612 (3) ÅT = 293 K
β = 102.98 (3)°Plate, pale yellow
V = 1897.9 (7) Å30.42 × 0.24 × 0.08 mm
Z = 4
Kuma KM-4 four-circle diffractometer2464 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
graphiteθmax = 28.0°, θmin = 2.1°
Profile data from ω/2θ scansh = 0→12
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008)k = 0→17
Tmin = 0.753, Tmax = 0.890l = −19→19
4755 measured reflections3 standard reflections every 200 reflections
4500 independent reflections intensity decay: 0.2%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.144H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0947P)2] where P = (Fo2 + 2Fc2)/3
4500 reflections(Δ/σ)max = 0.001
242 parametersΔρmax = 1.55 e Å3
4 restraintsΔρmin = −1.86 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Sn10.78174 (3)0.49914 (2)0.21581 (2)0.04452 (13)
S11.10224 (14)0.53273 (12)0.15598 (9)0.0519 (3)
O10.6418 (4)0.4762 (3)0.3068 (3)0.0605 (10)
C40.2430 (5)0.4664 (4)0.4708 (3)0.0520 (11)
H40.18320.45730.50940.062*
C20.4266 (5)0.3988 (4)0.3974 (3)0.0468 (11)
C50.2474 (5)0.5571 (4)0.4271 (3)0.0464 (11)
C10.4264 (4)0.4929 (3)0.3564 (3)0.0433 (9)
O50.0655 (5)0.6244 (4)0.4846 (3)0.0929 (15)
N20.1513 (5)0.6424 (4)0.4406 (3)0.0634 (11)
O20.4719 (4)0.5782 (3)0.2313 (3)0.0696 (11)
C30.3313 (5)0.3894 (4)0.4546 (3)0.0507 (11)
C60.3363 (5)0.5725 (4)0.3706 (3)0.0460 (10)
H60.33640.63530.34200.055*
C80.5152 (7)0.3080 (4)0.3837 (4)0.0719 (16)
H8A0.48540.28440.32410.108*
H8B0.50320.25350.42300.108*
H8C0.61380.32780.39510.108*
O70.9437 (4)0.5132 (3)0.1204 (3)0.0582 (9)
C110.8247 (6)0.6531 (4)0.2547 (4)0.0705 (16)
H11A0.77250.69820.21020.106*
H11B0.92510.66620.26280.106*
H11C0.79630.66510.30900.106*
C141.1886 (6)0.4276 (5)0.1203 (5)0.080 (2)
H14A1.28730.44420.12490.121*
H14B1.14430.41230.06020.121*
H14C1.18160.36860.15620.121*
C130.9183 (7)0.3843 (5)0.2860 (4)0.0768 (18)
H13A0.86220.33300.30700.115*
H13B0.98310.41540.33500.115*
H13C0.97140.35270.24780.115*
C151.1490 (7)0.6276 (5)0.0867 (5)0.0784 (18)
H15A1.14060.59950.02890.118*
H15B1.24560.64920.10980.118*
H15C1.08620.68570.08380.118*
C120.6354 (6)0.4555 (6)0.1006 (4)0.0708 (15)
H12A0.62110.51180.05970.106*
H12B0.54610.43760.11460.106*
H12C0.67190.39710.07490.106*
O60.1644 (5)0.7246 (4)0.4073 (4)0.0974 (16)
C70.5190 (5)0.5193 (4)0.2909 (4)0.0508 (12)
N10.3216 (6)0.2921 (4)0.5005 (3)0.0681 (13)
O4A0.2078 (17)0.2483 (18)0.4785 (18)0.104 (8)0.45 (4)
O3A0.414 (3)0.258 (2)0.555 (3)0.175 (15)0.45 (4)
O40.287 (4)0.2135 (11)0.4607 (9)0.128 (9)0.55 (4)
O30.3585 (19)0.2947 (11)0.5794 (5)0.084 (5)0.55 (4)
U11U22U33U12U13U23
Sn10.03448 (18)0.0566 (2)0.0461 (2)0.00010 (14)0.01663 (12)0.00159 (15)
S10.0403 (6)0.0702 (7)0.0495 (7)−0.0029 (6)0.0192 (5)−0.0052 (6)
O10.048 (2)0.077 (2)0.065 (2)0.0068 (17)0.0314 (17)0.0058 (18)
C40.046 (3)0.063 (3)0.051 (3)−0.011 (2)0.020 (2)−0.007 (2)
C20.035 (2)0.054 (3)0.053 (3)−0.009 (2)0.0140 (19)−0.011 (2)
C50.031 (2)0.057 (3)0.054 (3)−0.004 (2)0.0159 (19)−0.005 (2)
C10.0305 (19)0.059 (3)0.043 (2)−0.0075 (19)0.0135 (16)−0.004 (2)
O50.076 (3)0.111 (4)0.114 (4)0.020 (3)0.067 (3)0.008 (3)
N20.051 (3)0.075 (3)0.069 (3)0.008 (2)0.024 (2)−0.008 (2)
O20.056 (2)0.093 (3)0.067 (3)0.011 (2)0.0278 (19)0.022 (2)
C30.044 (3)0.058 (3)0.054 (3)−0.014 (2)0.019 (2)−0.004 (2)
C60.039 (2)0.056 (3)0.046 (3)−0.004 (2)0.018 (2)0.000 (2)
C80.068 (4)0.062 (3)0.096 (4)0.001 (3)0.040 (3)−0.002 (3)
O70.0427 (18)0.085 (3)0.053 (2)−0.0081 (16)0.0236 (15)−0.0030 (17)
C110.063 (4)0.070 (4)0.085 (4)−0.011 (3)0.029 (3)−0.014 (3)
C140.049 (3)0.074 (4)0.123 (6)0.010 (3)0.029 (4)0.003 (4)
C130.070 (4)0.094 (4)0.072 (4)0.023 (3)0.030 (3)0.023 (3)
C150.064 (4)0.069 (4)0.111 (5)−0.011 (3)0.039 (3)0.003 (4)
C120.048 (3)0.105 (4)0.062 (3)−0.014 (3)0.019 (3)−0.018 (3)
O60.096 (4)0.070 (3)0.144 (5)0.024 (3)0.065 (3)0.014 (3)
C70.041 (2)0.063 (3)0.056 (3)−0.005 (2)0.026 (2)−0.001 (2)
N10.074 (4)0.065 (3)0.074 (4)−0.020 (3)0.035 (3)−0.001 (3)
O4A0.104 (11)0.084 (11)0.126 (15)−0.031 (9)0.030 (9)0.033 (9)
O3A0.099 (15)0.084 (15)0.29 (3)−0.014 (10)−0.067 (17)0.097 (17)
O40.22 (2)0.076 (7)0.109 (8)−0.068 (10)0.075 (11)−0.036 (6)
O30.116 (10)0.063 (7)0.073 (8)−0.003 (6)0.018 (6)0.019 (4)
Sn1—C122.097 (5)C8—H8B0.9600
Sn1—C112.101 (5)C8—H8C0.9600
Sn1—C132.121 (6)C11—H11A0.9600
Sn1—O12.186 (4)C11—H11B0.9600
Sn1—O72.391 (4)C11—H11C0.9600
S1—O71.523 (4)C14—H14A0.9600
S1—C141.752 (6)C14—H14B0.9600
S1—C151.761 (6)C14—H14C0.9600
O1—C71.280 (6)C13—H13A0.9600
C4—C51.366 (7)C13—H13B0.9600
C4—C31.371 (7)C13—H13C0.9600
C4—H40.9300C15—H15A0.9600
C2—C11.379 (6)C15—H15B0.9600
C2—C31.420 (7)C15—H15C0.9600
C2—C81.497 (7)C12—H12A0.9600
C5—C61.374 (6)C12—H12B0.9600
C5—N21.486 (6)C12—H12C0.9600
C1—C61.398 (6)N1—O3A1.174 (9)
C1—C71.537 (6)N1—O31.205 (8)
O5—N21.210 (6)N1—O41.201 (8)
N2—O61.205 (6)N1—O4A1.213 (8)
O2—C71.210 (6)O4A—O40.981 (17)
C3—N11.464 (7)O3A—O30.87 (4)
C6—H60.9300O3A—O41.78 (2)
C8—H8A0.9600
C12—Sn1—C11123.7 (3)H11B—C11—H11C109.5
C12—Sn1—C13118.2 (3)S1—C14—H14A109.5
C11—Sn1—C13117.3 (3)S1—C14—H14B109.5
C12—Sn1—O197.35 (19)H14A—C14—H14B109.5
C11—Sn1—O192.95 (19)S1—C14—H14C109.5
C13—Sn1—O188.19 (19)H14A—C14—H14C109.5
C12—Sn1—O783.81 (18)H14B—C14—H14C109.5
C11—Sn1—O789.68 (18)Sn1—C13—H13A109.5
C13—Sn1—O787.77 (19)Sn1—C13—H13B109.5
O1—Sn1—O7175.87 (12)H13A—C13—H13B109.5
O7—S1—C14105.2 (3)Sn1—C13—H13C109.5
O7—S1—C15105.4 (3)H13A—C13—H13C109.5
C14—S1—C1598.3 (3)H13B—C13—H13C109.5
C7—O1—Sn1119.4 (3)S1—C15—H15A109.5
C5—C4—C3116.5 (5)S1—C15—H15B109.5
C5—C4—H4121.7H15A—C15—H15B109.5
C3—C4—H4121.7S1—C15—H15C109.5
C1—C2—C3115.8 (4)H15A—C15—H15C109.5
C1—C2—C8124.8 (4)H15B—C15—H15C109.5
C3—C2—C8119.4 (5)Sn1—C12—H12A109.5
C4—C5—C6122.6 (5)Sn1—C12—H12B109.5
C4—C5—N2118.8 (4)H12A—C12—H12B109.5
C6—C5—N2118.7 (4)Sn1—C12—H12C109.5
C2—C1—C6121.1 (4)H12A—C12—H12C109.5
C2—C1—C7124.5 (4)H12B—C12—H12C109.5
C6—C1—C7114.4 (4)O2—C7—O1126.5 (5)
O6—N2—O5124.6 (5)O2—C7—C1118.6 (4)
O6—N2—C5117.9 (4)O1—C7—C1114.9 (5)
O5—N2—C5117.5 (5)O3A—N1—O343 (2)
C4—C3—C2124.5 (5)O3A—N1—O497.4 (14)
C4—C3—N1115.3 (5)O3—N1—O4122.4 (10)
C2—C3—N1120.2 (5)O3A—N1—O4A121.3 (13)
C5—C6—C1119.5 (4)O3—N1—O4A110.0 (13)
C5—C6—H6120.2O4—N1—O4A48.0 (8)
C1—C6—H6120.2O3A—N1—C3124.0 (11)
C2—C8—H8A109.5O3—N1—C3116.1 (7)
C2—C8—H8B109.5O4—N1—C3121.3 (8)
H8A—C8—H8B109.5O4A—N1—C3114.8 (8)
C2—C8—H8C109.5O4—O4A—N165.4 (8)
H8A—C8—H8C109.5O3—O3A—N170.4 (12)
H8B—C8—H8C109.5O3—O3A—O499.4 (19)
S1—O7—Sn1121.6 (2)N1—O3A—O441.9 (8)
Sn1—C11—H11A109.5O4A—O4—N166.6 (8)
Sn1—C11—H11B109.5O4A—O4—O3A92.9 (14)
H11A—C11—H11B109.5N1—O4—O3A40.7 (7)
Sn1—C11—H11C109.5O3A—O3—N166.6 (14)
H11A—C11—H11C109.5
D—H···AD—HH···AD···AD—H···A
C11—H11C···O3i0.962.593.509 (15)162.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11C⋯O3i0.962.593.509 (15)162

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (Methanol-κO)(2-methyl-3,5-dinitro-benzoato-κO)triphenyl-tin(IV).

Authors:  Muhammad Danish; Sabiha Ghafoor; Nazir Ahmad; Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07
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1.  catena-Poly[(diaqua-strontium)-bis-(μ-2-methyl-3,5-dinitro-benzoato)].

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