| Literature DB >> 21836894 |
Abstract
In the title complex, [Zn(C(10)H(12)NO(2))(2)(H(2)O)]·H(2)O, the Zn(II) ion is coordinated by two N and two O atoms from two 5-n-butyl-pyridine-2-carboxyl-ato ligands and one O atom from a water mol-ecule in a distorted square-pyramidal geometry. In the crystal, inter-molecular O-H⋯O hydrogen bonds link mol-ecules into a two-dimensional supramolecular structure parallel to (001).Entities:
Year: 2011 PMID: 21836894 PMCID: PMC3151896 DOI: 10.1107/S1600536811021623
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C20H12NO2)2(H2O)]·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5809 reflections | |
| θ = 2.3–27.0° | |
| µ = 1.21 mm−1 | |
| α = 97.799 (2)° | |
| β = 91.533 (2)° | Prism, colorless |
| γ = 113.464 (2)° | 0.48 × 0.42 × 0.15 mm |
| Bruker APEXII CCD area-detector diffractometer | 3847 independent reflections |
| Radiation source: fine-focus sealed tube | 3410 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.5°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 7770 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3847 reflections | (Δ/σ)max = 0.008 |
| 264 parameters | Δρmax = 0.47 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.9784 (2) | 0.0833 (2) | 0.17910 (17) | 0.0249 (4) | |
| C2 | 1.0361 (2) | 0.2469 (2) | 0.22551 (17) | 0.0239 (4) | |
| C3 | 1.1290 (3) | 0.3107 (2) | 0.32451 (18) | 0.0311 (5) | |
| H3 | 1.1603 | 0.2528 | 0.3674 | 0.037* | |
| C4 | 1.1761 (3) | 0.4611 (2) | 0.36059 (19) | 0.0341 (5) | |
| H4 | 1.2413 | 0.5071 | 0.4282 | 0.041* | |
| C5 | 1.1283 (2) | 0.5447 (2) | 0.29835 (17) | 0.0275 (4) | |
| C6 | 1.0337 (2) | 0.4707 (2) | 0.19940 (17) | 0.0250 (4) | |
| H6 | 0.9991 | 0.5254 | 0.1555 | 0.030* | |
| C7 | 1.1750 (3) | 0.7081 (2) | 0.33348 (18) | 0.0336 (5) | |
| H7A | 1.1100 | 0.7396 | 0.2878 | 0.040* | |
| H7B | 1.2801 | 0.7601 | 0.3147 | 0.040* | |
| C8 | 1.1666 (4) | 0.7566 (3) | 0.4578 (2) | 0.0496 (7) | |
| H8A | 1.2515 | 0.7516 | 0.5025 | 0.059* | |
| H8B | 1.0716 | 0.6866 | 0.4823 | 0.059* | |
| C9 | 1.1725 (4) | 0.9123 (3) | 0.4849 (2) | 0.0544 (7) | |
| H9A | 1.0839 | 0.9153 | 0.4439 | 0.065* | |
| H9B | 1.1639 | 0.9341 | 0.5673 | 0.065* | |
| C10 | 1.3102 (4) | 1.0292 (3) | 0.4550 (3) | 0.0681 (9) | |
| H10A | 1.3987 | 1.0303 | 0.4976 | 0.102* | |
| H10B | 1.3044 | 1.1251 | 0.4743 | 0.102* | |
| H10C | 1.3193 | 1.0100 | 0.3734 | 0.102* | |
| C11 | 0.6412 (2) | 0.2796 (2) | −0.07353 (16) | 0.0238 (4) | |
| C12 | 0.5820 (2) | 0.1149 (2) | −0.11734 (16) | 0.0225 (4) | |
| C13 | 0.4469 (2) | 0.0367 (2) | −0.18239 (18) | 0.0285 (5) | |
| H13 | 0.3866 | 0.0852 | −0.2049 | 0.034* | |
| C14 | 0.4004 (2) | −0.1145 (2) | −0.21448 (18) | 0.0303 (5) | |
| H14 | 0.3074 | −0.1704 | −0.2593 | 0.036* | |
| C15 | 0.4900 (3) | −0.1841 (2) | −0.18108 (17) | 0.0281 (5) | |
| C16 | 0.6254 (2) | −0.0962 (2) | −0.11735 (17) | 0.0264 (4) | |
| H16 | 0.6890 | −0.1414 | −0.0949 | 0.032* | |
| C17 | 0.4419 (3) | −0.3486 (2) | −0.21017 (18) | 0.0348 (5) | |
| H17A | 0.5116 | −0.3770 | −0.1667 | 0.042* | |
| H17B | 0.3397 | −0.3986 | −0.1853 | 0.042* | |
| C18 | 0.4389 (4) | −0.4036 (3) | −0.3335 (2) | 0.0471 (7) | |
| H18A | 0.5387 | −0.3483 | −0.3602 | 0.057* | |
| H18B | 0.3629 | −0.3829 | −0.3767 | 0.057* | |
| C19 | 0.4019 (3) | −0.5685 (3) | −0.3597 (2) | 0.0483 (7) | |
| H19A | 0.4110 | −0.5946 | −0.4414 | 0.058* | |
| H19B | 0.4777 | −0.5890 | −0.3161 | 0.058* | |
| C20 | 0.2495 (4) | −0.6646 (3) | −0.3326 (3) | 0.0684 (10) | |
| H20A | 0.2403 | −0.6422 | −0.2512 | 0.103* | |
| H20B | 0.2340 | −0.7682 | −0.3520 | 0.103* | |
| H20C | 0.1733 | −0.6469 | −0.3765 | 0.103* | |
| N1 | 0.98977 (19) | 0.32660 (18) | 0.16371 (14) | 0.0230 (4) | |
| N2 | 0.67075 (19) | 0.04994 (18) | −0.08590 (13) | 0.0228 (3) | |
| O1 | 0.88860 (16) | 0.03799 (15) | 0.09036 (12) | 0.0277 (3) | |
| O2 | 1.02181 (19) | 0.00693 (17) | 0.23255 (13) | 0.0351 (4) | |
| O3 | 0.76689 (16) | 0.33710 (15) | −0.01438 (12) | 0.0262 (3) | |
| O4 | 0.56258 (16) | 0.34586 (16) | −0.09763 (13) | 0.0319 (3) | |
| O1W | 1.02425 (16) | 0.24272 (15) | −0.09978 (12) | 0.0253 (3) | |
| H1A | 1.0153 | 0.1655 | −0.1447 | 0.038* | |
| H1B | 1.1118 | 0.2841 | −0.0657 | 0.038* | |
| O2W | 0.69815 (17) | 0.64141 (17) | 0.00070 (14) | 0.0364 (4) | |
| H2A | 0.6306 | 0.6516 | 0.0409 | 0.055* | |
| H2B | 0.6653 | 0.5519 | −0.0315 | 0.055* | |
| Zn1 | 0.86873 (3) | 0.19830 (2) | 0.010473 (19) | 0.02289 (9) |
| C1 | 0.0274 (11) | 0.0232 (10) | 0.0270 (10) | 0.0130 (9) | 0.0052 (9) | 0.0040 (8) |
| C2 | 0.0226 (10) | 0.0245 (10) | 0.0262 (10) | 0.0113 (9) | 0.0042 (8) | 0.0036 (8) |
| C3 | 0.0358 (12) | 0.0285 (11) | 0.0303 (11) | 0.0154 (10) | −0.0039 (9) | 0.0032 (9) |
| C4 | 0.0394 (13) | 0.0308 (12) | 0.0278 (11) | 0.0121 (10) | −0.0068 (10) | −0.0004 (9) |
| C5 | 0.0316 (11) | 0.0231 (10) | 0.0253 (10) | 0.0090 (9) | 0.0039 (9) | 0.0015 (8) |
| C6 | 0.0281 (11) | 0.0225 (10) | 0.0252 (10) | 0.0110 (9) | 0.0035 (8) | 0.0035 (8) |
| C7 | 0.0424 (13) | 0.0221 (11) | 0.0295 (11) | 0.0072 (10) | −0.0006 (10) | 0.0013 (9) |
| C8 | 0.085 (2) | 0.0331 (13) | 0.0338 (13) | 0.0273 (14) | 0.0130 (13) | 0.0042 (10) |
| C9 | 0.085 (2) | 0.0381 (15) | 0.0421 (15) | 0.0281 (15) | 0.0152 (14) | 0.0021 (11) |
| C10 | 0.073 (2) | 0.0339 (15) | 0.089 (2) | 0.0174 (15) | 0.0115 (18) | −0.0066 (15) |
| C11 | 0.0247 (10) | 0.0241 (10) | 0.0238 (10) | 0.0115 (9) | 0.0061 (8) | 0.0019 (8) |
| C12 | 0.0224 (10) | 0.0227 (10) | 0.0220 (10) | 0.0088 (8) | 0.0053 (8) | 0.0025 (8) |
| C13 | 0.0252 (11) | 0.0319 (12) | 0.0285 (11) | 0.0128 (9) | 0.0025 (9) | 0.0013 (9) |
| C14 | 0.0246 (11) | 0.0301 (11) | 0.0272 (11) | 0.0037 (9) | 0.0008 (9) | −0.0017 (9) |
| C15 | 0.0349 (12) | 0.0232 (10) | 0.0208 (10) | 0.0065 (9) | 0.0046 (9) | 0.0014 (8) |
| C16 | 0.0320 (11) | 0.0230 (10) | 0.0236 (10) | 0.0105 (9) | 0.0039 (9) | 0.0039 (8) |
| C17 | 0.0450 (14) | 0.0218 (11) | 0.0283 (11) | 0.0055 (10) | −0.0014 (10) | 0.0005 (9) |
| C18 | 0.077 (2) | 0.0301 (13) | 0.0324 (13) | 0.0203 (13) | 0.0135 (12) | 0.0027 (10) |
| C19 | 0.0670 (18) | 0.0298 (13) | 0.0418 (14) | 0.0143 (13) | 0.0186 (13) | −0.0012 (10) |
| C20 | 0.068 (2) | 0.0414 (16) | 0.069 (2) | 0.0008 (15) | 0.0174 (17) | −0.0152 (14) |
| N1 | 0.0237 (9) | 0.0204 (8) | 0.0241 (8) | 0.0085 (7) | 0.0012 (7) | 0.0018 (7) |
| N2 | 0.0255 (9) | 0.0207 (8) | 0.0210 (8) | 0.0085 (7) | 0.0021 (7) | 0.0018 (6) |
| O1 | 0.0304 (8) | 0.0211 (7) | 0.0310 (8) | 0.0107 (6) | −0.0030 (6) | 0.0020 (6) |
| O2 | 0.0506 (10) | 0.0279 (8) | 0.0316 (8) | 0.0223 (8) | −0.0051 (7) | 0.0020 (6) |
| O3 | 0.0234 (7) | 0.0208 (7) | 0.0327 (8) | 0.0098 (6) | −0.0020 (6) | −0.0023 (6) |
| O4 | 0.0277 (8) | 0.0270 (8) | 0.0431 (9) | 0.0161 (7) | −0.0029 (7) | −0.0016 (7) |
| O1W | 0.0243 (7) | 0.0229 (7) | 0.0296 (7) | 0.0116 (6) | 0.0011 (6) | 0.0012 (6) |
| O2W | 0.0281 (8) | 0.0241 (8) | 0.0546 (10) | 0.0112 (7) | −0.0004 (7) | −0.0025 (7) |
| Zn1 | 0.02298 (14) | 0.01954 (13) | 0.02499 (14) | 0.00872 (10) | −0.00164 (9) | 0.00013 (9) |
| C1—O2 | 1.241 (2) | C13—C14 | 1.389 (3) |
| C1—O1 | 1.261 (3) | C13—H13 | 0.9500 |
| C1—C2 | 1.519 (3) | C14—C15 | 1.391 (3) |
| C2—N1 | 1.345 (3) | C14—H14 | 0.9500 |
| C2—C3 | 1.376 (3) | C15—C16 | 1.386 (3) |
| C3—C4 | 1.388 (3) | C15—C17 | 1.508 (3) |
| C3—H3 | 0.9500 | C16—N2 | 1.342 (3) |
| C4—C5 | 1.387 (3) | C16—H16 | 0.9500 |
| C4—H4 | 0.9500 | C17—C18 | 1.494 (3) |
| C5—C6 | 1.395 (3) | C17—H17A | 0.9900 |
| C5—C7 | 1.506 (3) | C17—H17B | 0.9900 |
| C6—N1 | 1.332 (3) | C18—C19 | 1.528 (3) |
| C6—H6 | 0.9500 | C18—H18A | 0.9900 |
| C7—C8 | 1.511 (3) | C18—H18B | 0.9900 |
| C7—H7A | 0.9900 | C19—C20 | 1.480 (4) |
| C7—H7B | 0.9900 | C19—H19A | 0.9900 |
| C8—C9 | 1.525 (3) | C19—H19B | 0.9900 |
| C8—H8A | 0.9900 | C20—H20A | 0.9800 |
| C8—H8B | 0.9900 | C20—H20B | 0.9800 |
| C9—C10 | 1.474 (4) | C20—H20C | 0.9800 |
| C9—H9A | 0.9900 | N1—Zn1 | 2.1007 (16) |
| C9—H9B | 0.9900 | N2—Zn1 | 2.0877 (17) |
| C10—H10A | 0.9800 | O1—Zn1 | 2.0416 (14) |
| C10—H10B | 0.9800 | O3—Zn1 | 2.0443 (14) |
| C10—H10C | 0.9800 | O1W—Zn1 | 1.9825 (14) |
| C11—O4 | 1.243 (2) | O1W—H1A | 0.8498 |
| C11—O3 | 1.264 (2) | O1W—H1B | 0.8440 |
| C11—C12 | 1.521 (3) | O2W—H2A | 0.8514 |
| C12—N2 | 1.341 (3) | O2W—H2B | 0.8510 |
| C12—C13 | 1.377 (3) | ||
| O2—C1—O1 | 126.36 (19) | C15—C14—H14 | 120.0 |
| O2—C1—C2 | 117.37 (18) | C16—C15—C14 | 117.25 (19) |
| O1—C1—C2 | 116.27 (17) | C16—C15—C17 | 120.7 (2) |
| N1—C2—C3 | 121.57 (19) | C14—C15—C17 | 122.0 (2) |
| N1—C2—C1 | 115.64 (17) | N2—C16—C15 | 122.97 (19) |
| C3—C2—C1 | 122.79 (18) | N2—C16—H16 | 118.5 |
| C2—C3—C4 | 118.9 (2) | C15—C16—H16 | 118.5 |
| C2—C3—H3 | 120.6 | C18—C17—C15 | 114.50 (19) |
| C4—C3—H3 | 120.6 | C18—C17—H17A | 108.6 |
| C5—C4—C3 | 120.3 (2) | C15—C17—H17A | 108.6 |
| C5—C4—H4 | 119.9 | C18—C17—H17B | 108.6 |
| C3—C4—H4 | 119.9 | C15—C17—H17B | 108.6 |
| C4—C5—C6 | 116.93 (19) | H17A—C17—H17B | 107.6 |
| C4—C5—C7 | 122.71 (19) | C17—C18—C19 | 113.5 (2) |
| C6—C5—C7 | 120.36 (19) | C17—C18—H18A | 108.9 |
| N1—C6—C5 | 122.96 (19) | C19—C18—H18A | 108.9 |
| N1—C6—H6 | 118.5 | C17—C18—H18B | 108.9 |
| C5—C6—H6 | 118.5 | C19—C18—H18B | 108.9 |
| C5—C7—C8 | 115.23 (19) | H18A—C18—H18B | 107.7 |
| C5—C7—H7A | 108.5 | C20—C19—C18 | 114.3 (2) |
| C8—C7—H7A | 108.5 | C20—C19—H19A | 108.7 |
| C5—C7—H7B | 108.5 | C18—C19—H19A | 108.7 |
| C8—C7—H7B | 108.5 | C20—C19—H19B | 108.7 |
| H7A—C7—H7B | 107.5 | C18—C19—H19B | 108.7 |
| C7—C8—C9 | 113.9 (2) | H19A—C19—H19B | 107.6 |
| C7—C8—H8A | 108.8 | C19—C20—H20A | 109.5 |
| C9—C8—H8A | 108.8 | C19—C20—H20B | 109.5 |
| C7—C8—H8B | 108.8 | H20A—C20—H20B | 109.5 |
| C9—C8—H8B | 108.8 | C19—C20—H20C | 109.5 |
| H8A—C8—H8B | 107.7 | H20A—C20—H20C | 109.5 |
| C10—C9—C8 | 114.8 (3) | H20B—C20—H20C | 109.5 |
| C10—C9—H9A | 108.6 | C6—N1—C2 | 119.38 (17) |
| C8—C9—H9A | 108.6 | C6—N1—Zn1 | 129.26 (14) |
| C10—C9—H9B | 108.6 | C2—N1—Zn1 | 111.10 (13) |
| C8—C9—H9B | 108.6 | C12—N2—C16 | 119.00 (17) |
| H9A—C9—H9B | 107.6 | C12—N2—Zn1 | 112.83 (13) |
| C9—C10—H10A | 109.5 | C16—N2—Zn1 | 128.17 (14) |
| C9—C10—H10B | 109.5 | C1—O1—Zn1 | 115.66 (13) |
| H10A—C10—H10B | 109.5 | C11—O3—Zn1 | 116.22 (12) |
| C9—C10—H10C | 109.5 | Zn1—O1W—H1A | 111.6 |
| H10A—C10—H10C | 109.5 | Zn1—O1W—H1B | 110.8 |
| H10B—C10—H10C | 109.5 | H1A—O1W—H1B | 110.4 |
| O4—C11—O3 | 125.56 (18) | H2A—O2W—H2B | 108.2 |
| O4—C11—C12 | 117.92 (17) | O1W—Zn1—O1 | 106.09 (6) |
| O3—C11—C12 | 116.52 (17) | O1W—Zn1—O3 | 102.80 (6) |
| N2—C12—C13 | 122.02 (18) | O1—Zn1—O3 | 151.11 (6) |
| N2—C12—C11 | 114.71 (17) | O1W—Zn1—N2 | 104.39 (6) |
| C13—C12—C11 | 123.26 (18) | O1—Zn1—N2 | 92.68 (6) |
| C12—C13—C14 | 118.69 (19) | O3—Zn1—N2 | 79.70 (6) |
| C12—C13—H13 | 120.7 | O1W—Zn1—N1 | 103.25 (6) |
| C14—C13—H13 | 120.7 | O1—Zn1—N1 | 79.91 (6) |
| C13—C14—C15 | 120.04 (19) | O3—Zn1—N1 | 93.96 (6) |
| C13—C14—H14 | 120.0 | N2—Zn1—N1 | 152.36 (6) |
| O2—C1—C2—N1 | 178.32 (18) | C1—C2—N1—Zn1 | −6.2 (2) |
| O1—C1—C2—N1 | −2.8 (3) | C13—C12—N2—C16 | −1.0 (3) |
| O2—C1—C2—C3 | −2.0 (3) | C11—C12—N2—C16 | 177.81 (17) |
| O1—C1—C2—C3 | 176.9 (2) | C13—C12—N2—Zn1 | 179.31 (15) |
| N1—C2—C3—C4 | −0.3 (3) | C11—C12—N2—Zn1 | −1.9 (2) |
| C1—C2—C3—C4 | −179.9 (2) | C15—C16—N2—C12 | −0.2 (3) |
| C2—C3—C4—C5 | 0.8 (3) | C15—C16—N2—Zn1 | 179.46 (15) |
| C3—C4—C5—C6 | −0.5 (3) | O2—C1—O1—Zn1 | −170.40 (17) |
| C3—C4—C5—C7 | 179.7 (2) | C2—C1—O1—Zn1 | 10.8 (2) |
| C4—C5—C6—N1 | −0.3 (3) | O4—C11—O3—Zn1 | 179.89 (16) |
| C7—C5—C6—N1 | 179.44 (19) | C12—C11—O3—Zn1 | 0.5 (2) |
| C4—C5—C7—C8 | −45.1 (3) | C1—O1—Zn1—O1W | 89.95 (15) |
| C6—C5—C7—C8 | 135.1 (2) | C1—O1—Zn1—O3 | −90.86 (18) |
| C5—C7—C8—C9 | −164.3 (2) | C1—O1—Zn1—N2 | −164.24 (14) |
| C7—C8—C9—C10 | −59.7 (4) | C1—O1—Zn1—N1 | −11.06 (14) |
| O4—C11—C12—N2 | −178.46 (18) | C11—O3—Zn1—O1W | 101.39 (14) |
| O3—C11—C12—N2 | 0.9 (3) | C11—O3—Zn1—O1 | −77.81 (18) |
| O4—C11—C12—C13 | 0.4 (3) | C11—O3—Zn1—N2 | −1.18 (14) |
| O3—C11—C12—C13 | 179.76 (19) | C11—O3—Zn1—N1 | −154.05 (14) |
| N2—C12—C13—C14 | 1.1 (3) | C12—N2—Zn1—O1W | −99.05 (13) |
| C11—C12—C13—C14 | −177.59 (18) | C16—N2—Zn1—O1W | 81.32 (17) |
| C12—C13—C14—C15 | −0.1 (3) | C12—N2—Zn1—O1 | 153.59 (13) |
| C13—C14—C15—C16 | −1.0 (3) | C16—N2—Zn1—O1 | −26.04 (17) |
| C13—C14—C15—C17 | 177.75 (19) | C12—N2—Zn1—O3 | 1.66 (13) |
| C14—C15—C16—N2 | 1.1 (3) | C16—N2—Zn1—O3 | −177.97 (17) |
| C17—C15—C16—N2 | −177.61 (19) | C12—N2—Zn1—N1 | 80.37 (19) |
| C16—C15—C17—C18 | −112.4 (3) | C16—N2—Zn1—N1 | −99.3 (2) |
| C14—C15—C17—C18 | 68.9 (3) | C6—N1—Zn1—O1W | 78.55 (18) |
| C15—C17—C18—C19 | 175.5 (2) | C2—N1—Zn1—O1W | −95.41 (14) |
| C17—C18—C19—C20 | 63.4 (4) | C6—N1—Zn1—O1 | −177.13 (18) |
| C5—C6—N1—C2 | 0.9 (3) | C2—N1—Zn1—O1 | 8.90 (13) |
| C5—C6—N1—Zn1 | −172.66 (15) | C6—N1—Zn1—O3 | −25.60 (18) |
| C3—C2—N1—C6 | −0.6 (3) | C2—N1—Zn1—O3 | 160.44 (13) |
| C1—C2—N1—C6 | 179.13 (17) | C6—N1—Zn1—N2 | −100.9 (2) |
| C3—C2—N1—Zn1 | 174.08 (16) | C2—N1—Zn1—N2 | 85.17 (19) |
| H··· | ||||
| O2W—H2B···O4 | 0.85 | 1.94 | 2.780 (2) | 172 |
| O2W—H2A···O4i | 0.85 | 2.02 | 2.849 (2) | 165 |
| O1W—H1B···O2Wii | 0.84 | 1.80 | 2.638 (2) | 175 |
| O1W—H1A···O2iii | 0.85 | 1.79 | 2.636 (2) | 174 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2 | 0.85 | 1.94 | 2.780 (2) | 172 |
| O2 | 0.85 | 2.02 | 2.849 (2) | 165 |
| O1 | 0.84 | 1.80 | 2.638 (2) | 175 |
| O1 | 0.85 | 1.79 | 2.636 (2) | 174 |
Symmetry codes: (i) ; (ii) ; (iii) .