| Literature DB >> 21836883 |
Wei Xu1.
Abstract
The title compound, {[Mn(HCOO)(2)(C(12)H(8)N(2))(H(2)O)]·H(2)O}(n), consists of polymeric chains of the complex [Mn(HCOO)(2)(phen)(H(2)O)](∞) (phen is 1,10-phenanthroline) with solvent water mol-ecules. The chains contain six-coordinate Mn(II) ions bridged by formate anions. They are further extended into a three-dimensional network via O-H⋯O hydrogen-bonding inter-actions and inter-chain π-π stacking inter-actions, with a centroid-centroid distance of 3.679 (4) Å.Entities:
Year: 2011 PMID: 21836883 PMCID: PMC3151819 DOI: 10.1107/S1600536811020575
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(HCO2)2(C12H8N2)(H2O)]·H2O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 8376 reflections |
| θ = 3.4–27.4° | |
| µ = 0.89 mm−1 | |
| Needle, yellow | |
| 0.31 × 0.12 × 0.09 mm |
| Rigaku R-AXIS RAPID diffractometer | 2644 independent reflections |
| Radiation source: fine-focus sealed tube | 1921 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 11493 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.70 e Å−3 | |
| 2644 reflections | Δρmin = −0.93 e Å−3 |
| 209 parameters | Extinction correction: |
| 1 restraint | Extinction coefficient: 0.0025 (6) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1165 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.01 (4) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Mn1 | 0.57992 (4) | 0.37155 (6) | 0.67916 (16) | 0.0454 (3) | |
| N1 | 0.6768 (3) | 0.3026 (4) | 0.5202 (9) | 0.0525 (13) | |
| N2 | 0.6704 (2) | 0.4167 (4) | 0.8785 (8) | 0.0470 (12) | |
| C1 | 0.6796 (4) | 0.2444 (5) | 0.3480 (10) | 0.068 (2) | |
| H1A | 0.6385 | 0.2277 | 0.2802 | 0.082* | |
| C2 | 0.7429 (5) | 0.2076 (6) | 0.2658 (13) | 0.087 (3) | |
| H2A | 0.7435 | 0.1662 | 0.1464 | 0.105* | |
| C3 | 0.8034 (5) | 0.2333 (7) | 0.3629 (15) | 0.091 (3) | |
| H3A | 0.8455 | 0.2099 | 0.3084 | 0.110* | |
| C4 | 0.8027 (4) | 0.2946 (6) | 0.5440 (13) | 0.073 (2) | |
| C5 | 0.8643 (4) | 0.3266 (7) | 0.6559 (18) | 0.093 (3) | |
| H5A | 0.9077 | 0.3074 | 0.6049 | 0.112* | |
| C6 | 0.8603 (4) | 0.3828 (8) | 0.8299 (16) | 0.096 (3) | |
| H6A | 0.9010 | 0.4006 | 0.8988 | 0.116* | |
| C7 | 0.7958 (3) | 0.4161 (6) | 0.9127 (12) | 0.067 (2) | |
| C8 | 0.7882 (4) | 0.4722 (7) | 1.0989 (12) | 0.079 (3) | |
| H8A | 0.8274 | 0.4906 | 1.1742 | 0.095* | |
| C9 | 0.7246 (4) | 0.4999 (5) | 1.1701 (14) | 0.0725 (19) | |
| H9A | 0.7197 | 0.5372 | 1.2932 | 0.087* | |
| C10 | 0.6668 (4) | 0.4714 (5) | 1.0556 (11) | 0.0600 (17) | |
| H10A | 0.6233 | 0.4913 | 1.1043 | 0.072* | |
| C11 | 0.7335 (3) | 0.3880 (5) | 0.8082 (10) | 0.0513 (16) | |
| C12 | 0.7379 (3) | 0.3280 (5) | 0.6200 (10) | 0.0553 (19) | |
| C13 | 0.5493 (3) | 0.5910 (5) | 0.4494 (9) | 0.0508 (15) | |
| H13 | 0.5562 | 0.6662 | 0.4325 | 0.061* | |
| O1 | 0.5939 (2) | 0.5392 (3) | 0.5480 (7) | 0.0537 (11) | |
| O2 | 0.4966 (2) | 0.5501 (3) | 0.3718 (7) | 0.0599 (12) | |
| C14 | 0.5604 (4) | 0.1288 (6) | 0.7827 (12) | 0.071 (2) | |
| H14 | 0.5642 | 0.1173 | 0.6428 | 0.086* | |
| O3 | 0.5629 (3) | 0.2210 (4) | 0.8388 (7) | 0.0747 (14) | |
| O4 | 0.5534 (4) | 0.0457 (4) | 0.8904 (10) | 0.112 (2) | |
| O5 | 0.5090 (2) | 0.3307 (3) | 0.4372 (7) | 0.0719 (14) | |
| H5B | 0.4990 | 0.3890 | 0.3784 | 0.108* | |
| H5C | 0.5014 | 0.2710 | 0.3749 | 0.108* | |
| O6 | 0.4906 (3) | 0.1479 (4) | 0.2384 (9) | 0.115 (2) | |
| H6B | 0.4780 | 0.0927 | 0.3042 | 0.173* | |
| H6C | 0.5237 | 0.1210 | 0.1706 | 0.173* |
| Mn1 | 0.0384 (4) | 0.0469 (4) | 0.0509 (5) | 0.0040 (4) | 0.0029 (6) | −0.0014 (6) |
| N1 | 0.052 (3) | 0.052 (3) | 0.054 (3) | 0.013 (2) | 0.016 (3) | 0.008 (3) |
| N2 | 0.039 (3) | 0.053 (3) | 0.049 (3) | 0.005 (2) | 0.002 (2) | 0.004 (3) |
| C1 | 0.094 (6) | 0.053 (4) | 0.056 (4) | 0.020 (4) | 0.035 (4) | −0.002 (4) |
| C2 | 0.129 (8) | 0.061 (4) | 0.073 (5) | 0.023 (5) | 0.050 (6) | 0.012 (4) |
| C3 | 0.096 (7) | 0.075 (6) | 0.103 (7) | 0.043 (5) | 0.049 (6) | 0.036 (6) |
| C4 | 0.062 (5) | 0.080 (5) | 0.078 (5) | 0.021 (4) | 0.030 (4) | 0.041 (4) |
| C5 | 0.039 (4) | 0.129 (7) | 0.112 (8) | 0.019 (4) | 0.019 (5) | 0.063 (8) |
| C6 | 0.050 (5) | 0.133 (9) | 0.106 (8) | −0.001 (5) | −0.002 (5) | 0.059 (7) |
| C7 | 0.043 (4) | 0.078 (5) | 0.078 (6) | −0.007 (4) | −0.011 (4) | 0.040 (4) |
| C8 | 0.075 (5) | 0.083 (5) | 0.081 (6) | −0.026 (4) | −0.036 (4) | 0.033 (4) |
| C9 | 0.082 (5) | 0.069 (4) | 0.066 (4) | −0.018 (4) | −0.029 (5) | 0.013 (5) |
| C10 | 0.069 (5) | 0.058 (4) | 0.053 (4) | −0.001 (4) | −0.005 (4) | 0.005 (3) |
| C11 | 0.045 (4) | 0.057 (4) | 0.051 (4) | 0.005 (3) | 0.003 (3) | 0.023 (3) |
| C12 | 0.040 (4) | 0.057 (4) | 0.068 (5) | 0.017 (3) | 0.011 (3) | 0.024 (3) |
| C13 | 0.047 (4) | 0.047 (4) | 0.058 (4) | 0.000 (3) | −0.007 (3) | 0.013 (3) |
| O1 | 0.047 (2) | 0.049 (2) | 0.065 (3) | −0.0018 (19) | −0.016 (2) | 0.008 (2) |
| O2 | 0.050 (3) | 0.052 (3) | 0.078 (3) | 0.004 (2) | −0.019 (2) | 0.008 (2) |
| C14 | 0.090 (6) | 0.048 (4) | 0.076 (5) | 0.019 (4) | 0.024 (4) | 0.015 (4) |
| O3 | 0.090 (4) | 0.058 (3) | 0.075 (4) | 0.005 (3) | 0.021 (3) | 0.002 (3) |
| O4 | 0.164 (6) | 0.056 (3) | 0.117 (5) | 0.008 (4) | 0.023 (5) | 0.024 (4) |
| O5 | 0.085 (4) | 0.048 (3) | 0.082 (3) | 0.000 (2) | −0.032 (3) | 0.001 (2) |
| O6 | 0.165 (6) | 0.085 (4) | 0.095 (5) | −0.030 (4) | 0.028 (4) | −0.033 (3) |
| Mn1—O3 | 2.134 (5) | C6—H6A | 0.9300 |
| Mn1—O5 | 2.150 (4) | C7—C8 | 1.405 (11) |
| Mn1—O2i | 2.161 (4) | C7—C11 | 1.422 (9) |
| Mn1—O1 | 2.228 (4) | C8—C9 | 1.353 (10) |
| Mn1—N2 | 2.246 (5) | C8—H8A | 0.9300 |
| Mn1—N1 | 2.295 (5) | C9—C10 | 1.385 (9) |
| N1—C1 | 1.333 (8) | C9—H9A | 0.9300 |
| N1—C12 | 1.382 (8) | C10—H10A | 0.9300 |
| N2—C10 | 1.339 (9) | C11—C12 | 1.435 (9) |
| N2—C11 | 1.346 (7) | C13—O2 | 1.240 (7) |
| C1—C2 | 1.406 (10) | C13—O1 | 1.245 (7) |
| C1—H1A | 0.9300 | C13—H13 | 0.9300 |
| C2—C3 | 1.364 (11) | O2—Mn1ii | 2.161 (4) |
| C2—H2A | 0.9300 | C14—O3 | 1.180 (8) |
| C3—C4 | 1.401 (12) | C14—O4 | 1.240 (8) |
| C3—H3A | 0.9300 | C14—H14 | 0.9300 |
| C4—C12 | 1.403 (9) | O5—H5B | 0.8290 |
| C4—C5 | 1.448 (12) | O5—H5C | 0.8460 |
| C5—C6 | 1.331 (13) | O6—H6B | 0.8339 |
| C5—H5A | 0.9300 | O6—H6C | 0.8420 |
| C6—C7 | 1.414 (11) | ||
| O3—Mn1—O5 | 93.75 (19) | C4—C5—H5A | 119.2 |
| O3—Mn1—O2i | 89.28 (17) | C5—C6—C7 | 121.8 (9) |
| O5—Mn1—O2i | 95.71 (18) | C5—C6—H6A | 119.1 |
| O3—Mn1—O1 | 172.92 (19) | C7—C6—H6A | 119.1 |
| O5—Mn1—O1 | 90.21 (16) | C8—C7—C6 | 124.3 (8) |
| O2i—Mn1—O1 | 84.49 (17) | C8—C7—C11 | 116.5 (7) |
| O3—Mn1—N2 | 92.55 (19) | C6—C7—C11 | 119.1 (8) |
| O5—Mn1—N2 | 167.9 (2) | C9—C8—C7 | 121.0 (7) |
| O2i—Mn1—N2 | 94.70 (18) | C9—C8—H8A | 119.5 |
| O1—Mn1—N2 | 84.64 (16) | C7—C8—H8A | 119.5 |
| O3—Mn1—N1 | 91.92 (18) | C8—C9—C10 | 118.6 (8) |
| O5—Mn1—N1 | 95.6 (2) | C8—C9—H9A | 120.7 |
| O2i—Mn1—N1 | 168.5 (2) | C10—C9—H9A | 120.7 |
| O1—Mn1—N1 | 93.53 (17) | N2—C10—C9 | 123.5 (7) |
| N2—Mn1—N1 | 73.86 (18) | N2—C10—H10A | 118.3 |
| C1—N1—C12 | 119.0 (6) | C9—C10—H10A | 118.3 |
| C1—N1—Mn1 | 127.6 (5) | N2—C11—C7 | 122.3 (7) |
| C12—N1—Mn1 | 113.4 (4) | N2—C11—C12 | 118.6 (6) |
| C10—N2—C11 | 118.2 (6) | C7—C11—C12 | 119.0 (6) |
| C10—N2—Mn1 | 125.8 (4) | N1—C12—C4 | 121.7 (7) |
| C11—N2—Mn1 | 116.0 (4) | N1—C12—C11 | 118.0 (6) |
| N1—C1—C2 | 121.9 (8) | C4—C12—C11 | 120.3 (7) |
| N1—C1—H1A | 119.1 | O2—C13—O1 | 125.0 (6) |
| C2—C1—H1A | 119.1 | O2—C13—H13 | 117.5 |
| C3—C2—C1 | 119.3 (8) | O1—C13—H13 | 117.5 |
| C3—C2—H2A | 120.3 | C13—O1—Mn1 | 125.5 (4) |
| C1—C2—H2A | 120.3 | C13—O2—Mn1ii | 128.4 (4) |
| C2—C3—C4 | 120.5 (8) | O3—C14—O4 | 127.0 (8) |
| C2—C3—H3A | 119.7 | O3—C14—H14 | 116.5 |
| C4—C3—H3A | 119.7 | O4—C14—H14 | 116.5 |
| C3—C4—C12 | 117.6 (8) | C14—O3—Mn1 | 131.9 (5) |
| C3—C4—C5 | 124.3 (8) | Mn1—O5—H5B | 107.1 |
| C12—C4—C5 | 118.1 (8) | Mn1—O5—H5C | 131.6 |
| C6—C5—C4 | 121.6 (8) | H5B—O5—H5C | 118.0 |
| C6—C5—H5A | 119.2 | H6B—O6—H6C | 100.5 |
| H··· | ||||
| O5—H5B···O2 | 0.83 | 1.96 | 2.713 (5) | 150 |
| O5—H5C···O6 | 0.85 | 1.76 | 2.601 (6) | 177 |
| O6—H6B···O4iii | 0.83 | 1.88 | 2.693 (8) | 166 |
| O6—H6C···O4iv | 0.83 | 2.13 | 2.864 (9) | 145 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.83 | 1.96 | 2.713 (5) | 150 |
| O5—H5 | 0.85 | 1.76 | 2.601 (6) | 177 |
| O6—H6 | 0.83 | 1.88 | 2.693 (8) | 166 |
| O6—H6 | 0.83 | 2.13 | 2.864 (9) | 145 |
Symmetry codes: (i) ; (ii) .