Literature DB >> 21836875

Bis{μ-1-[(2-ethyl-1H-imidazol-1-yl)meth-yl]-1H-benzotriazole}bis-(iodido-cadmium).

Xia Wang, Jun-Long Niu.   

Abstract

The dinuclear title complex, [Cd(2)I(4)(C(12)H(13)N(5))(2)], lies on a crystallographic center of inversion. The Cd(II) atom is four-coordinated by two N atoms from two 1-[(2-ethyl-1H-imidazol-1-yl)meth-yl]-1H-benzotriazole (bmei) ligands and two terminal I atoms in a distorted tetra-hedral coordination environment. The Cd(II) atoms are connected to each other by two bridging bmei ligands. The benzotriazole rings in adjacent mol-ecules are almost parallel, with an average inter-planar distance of 3.3400 (2) Å and a centroid-centroid distance of 4.852 (2) Å.

Entities:  

Year:  2011        PMID: 21836875      PMCID: PMC3152091          DOI: 10.1107/S1600536811021179

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Meng et al. (2009 ▶); Huang et al. (2006 ▶); Zhai et al. (2006 ▶); Wang et al. (2010 ▶).

Experimental

Crystal data

[Cd2I4(C12H13N5)2] M = 1186.95 Triclinic, a = 7.8323 (4) Å b = 10.0657 (6) Å c = 11.2335 (7) Å α = 78.849 (5)° β = 86.020 (5)° γ = 77.538 (5)° V = 848.08 (9) Å3 Z = 1 Mo Kα radiation μ = 4.93 mm−1 T = 290 K 0.25 × 0.21 × 0.15 mm

Data collection

Agilent Xcalibur Eos Gemini diffractometer Absorption correction: Gaussian [numerical absorption correction based on Gaussian integration over a multifaceted crystal model (CrysAlis PRO; Agilent, 2010 ▶)] T min = 0.287, T max = 0.487 13998 measured reflections 3462 independent reflections 2961 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.061 S = 1.08 3462 reflections 182 parameters H-atom parameters constrained Δρmax = 0.82 e Å−3 Δρmin = −1.05 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811021179/zq2107sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811021179/zq2107Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd2I4(C12H13N5)2]Z = 1
Mr = 1186.95F(000) = 548
Triclinic, P1Dx = 2.324 Mg m3
a = 7.8323 (4) ÅMo Kα radiation, λ = 0.7107 Å
b = 10.0657 (6) ÅCell parameters from 6849 reflections
c = 11.2335 (7) Åθ = 3.0–26.3°
α = 78.849 (5)°µ = 4.93 mm1
β = 86.020 (5)°T = 290 K
γ = 77.538 (5)°Prismatic, colourless
V = 848.08 (9) Å30.25 × 0.21 × 0.15 mm
Agilent Xcalibur Eos Gemini diffractometer3462 independent reflections
Radiation source: Enhance (Mo) X-ray Source2961 reflections with I > 2σ(I)
graphiteRint = 0.031
Detector resolution: 16.2312 pixels mm-1θmax = 26.3°, θmin = 3.0°
ω scansh = −9→9
Absorption correction: gaussian [numerical absorption correction based on Gaussian integration over a multifaceted crystal model (CrysAlis PRO; Agilent, 2010)]k = −12→12
Tmin = 0.287, Tmax = 0.487l = −14→14
13998 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.061H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.026P)2 + 0.3471P] where P = (Fo2 + 2Fc2)/3
3462 reflections(Δ/σ)max = 0.002
182 parametersΔρmax = 0.82 e Å3
0 restraintsΔρmin = −1.05 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.49488 (4)1.31204 (3)0.40337 (2)0.04897 (9)
I2−0.04748 (4)1.42680 (3)0.22432 (3)0.06153 (11)
Cd10.27758 (4)1.26989 (3)0.24333 (2)0.03657 (9)
N10.2561 (4)1.0409 (3)0.2834 (3)0.0385 (7)
N20.4017 (4)0.9559 (3)0.2627 (3)0.0389 (7)
N30.3713 (4)0.8276 (3)0.2862 (3)0.0350 (7)
N40.5058 (4)0.7062 (3)0.1294 (3)0.0354 (7)
N50.5744 (4)0.7249 (3)−0.0641 (3)0.0370 (7)
C10.2006 (5)0.8280 (4)0.3244 (3)0.0343 (8)
C20.1274 (5)0.9679 (4)0.3215 (3)0.0356 (8)
C3−0.0491 (5)1.0113 (4)0.3544 (4)0.0451 (10)
H3−0.10031.10430.35120.054*
C4−0.1422 (6)0.9082 (5)0.3916 (4)0.0514 (11)
H4−0.25980.93220.41390.062*
C5−0.0643 (6)0.7676 (5)0.3966 (4)0.0525 (11)
H5−0.13220.70180.42360.063*
C60.1076 (6)0.7234 (4)0.3635 (4)0.0469 (10)
H60.15830.63030.36700.056*
C70.5056 (5)0.7136 (4)0.2573 (3)0.0421 (9)
H7A0.48510.62740.30590.051*
H7B0.61920.72580.27720.051*
C80.3756 (5)0.6688 (4)0.0752 (4)0.0432 (9)
H80.27620.64140.11320.052*
C90.4206 (5)0.6798 (4)−0.0435 (4)0.0440 (9)
H90.35700.6598−0.10230.053*
C100.6246 (5)0.7411 (3)0.0414 (3)0.0330 (8)
C110.7851 (5)0.7927 (4)0.0590 (4)0.0442 (9)
H11B0.87410.7642−0.00070.053*
H11A0.82970.74940.13880.053*
C120.7549 (6)0.9494 (4)0.0479 (4)0.0564 (11)
H12B0.71430.9933−0.03160.085*
H12C0.86260.97480.06070.085*
H12A0.66870.97860.10780.085*
U11U22U33U12U13U23
I10.04834 (17)0.06438 (19)0.03873 (15)−0.02051 (14)−0.00434 (12)−0.00950 (13)
I20.04034 (16)0.04634 (17)0.0956 (3)−0.00025 (13)−0.00964 (16)−0.01437 (16)
Cd10.03734 (16)0.03522 (15)0.03821 (16)−0.00826 (12)0.00067 (12)−0.00907 (12)
N10.0398 (18)0.0340 (17)0.0428 (18)−0.0096 (14)0.0045 (15)−0.0097 (14)
N20.0433 (18)0.0328 (17)0.0398 (17)−0.0086 (14)0.0052 (15)−0.0065 (14)
N30.0410 (17)0.0326 (16)0.0298 (15)−0.0068 (14)0.0026 (13)−0.0037 (12)
N40.0390 (17)0.0341 (16)0.0343 (16)−0.0070 (14)0.0003 (14)−0.0103 (13)
N50.0422 (18)0.0361 (17)0.0344 (17)−0.0120 (14)0.0013 (14)−0.0074 (13)
C10.039 (2)0.038 (2)0.0278 (18)−0.0134 (17)−0.0008 (16)−0.0064 (15)
C20.039 (2)0.040 (2)0.0297 (18)−0.0114 (17)0.0007 (16)−0.0074 (16)
C30.040 (2)0.050 (2)0.047 (2)−0.0078 (19)0.0020 (19)−0.0138 (19)
C40.038 (2)0.071 (3)0.049 (2)−0.019 (2)0.0026 (19)−0.015 (2)
C50.053 (3)0.061 (3)0.053 (3)−0.036 (2)0.004 (2)−0.007 (2)
C60.058 (3)0.042 (2)0.045 (2)−0.020 (2)0.003 (2)−0.0083 (18)
C70.046 (2)0.038 (2)0.038 (2)0.0005 (18)−0.0032 (18)−0.0041 (17)
C80.042 (2)0.042 (2)0.050 (2)−0.0147 (18)0.0083 (19)−0.0142 (19)
C90.044 (2)0.047 (2)0.049 (2)−0.0176 (19)0.0011 (19)−0.0195 (19)
C100.0353 (19)0.0265 (17)0.037 (2)−0.0068 (15)0.0012 (16)−0.0058 (15)
C110.039 (2)0.051 (2)0.046 (2)−0.0116 (19)−0.0028 (18)−0.0127 (19)
C120.055 (3)0.059 (3)0.062 (3)−0.028 (2)−0.001 (2)−0.011 (2)
I1—Cd12.7094 (4)C3—C41.379 (6)
I2—Cd12.6892 (4)C4—H40.9300
Cd1—N12.302 (3)C4—C51.406 (6)
Cd1—N5i2.250 (3)C5—H50.9300
N1—N21.306 (4)C5—C61.373 (6)
N1—C21.371 (5)C6—H60.9300
N2—N31.337 (4)C7—H7A0.9700
N3—C11.375 (5)C7—H7B0.9700
N3—C71.451 (5)C8—H80.9300
N4—C71.452 (5)C8—C91.345 (5)
N4—C81.376 (5)C9—H90.9300
N4—C101.359 (5)C10—C111.499 (5)
N5—Cd1i2.250 (3)C11—H11B0.9700
N5—C91.367 (5)C11—H11A0.9700
N5—C101.323 (4)C11—C121.525 (6)
C1—C21.396 (5)C12—H12B0.9600
C1—C61.393 (5)C12—H12C0.9600
C2—C31.403 (5)C12—H12A0.9600
C3—H30.9300
I2—Cd1—I1118.809 (14)C4—C3—C2116.1 (4)
N1—Cd1—I1109.18 (8)C4—C3—H3121.9
N1—Cd1—I2108.30 (8)C4—C5—H5118.6
N1—N2—N3107.9 (3)C5—C4—H4119.1
N1—C2—C1107.6 (3)C5—C6—C1115.2 (4)
N1—C2—C3131.4 (4)C5—C6—H6122.4
N2—N1—Cd1113.7 (2)C6—C1—C2123.0 (4)
N2—N1—C2109.7 (3)C6—C5—C4122.8 (4)
N2—N3—C1111.1 (3)C6—C5—H5118.6
N2—N3—C7119.6 (3)H7A—C7—H7B108.0
N3—C1—C2103.7 (3)C8—N4—C7124.5 (3)
N3—C1—C6133.2 (4)C8—C9—N5109.3 (4)
N3—C7—N4110.9 (3)C8—C9—H9125.4
N3—C7—H7A109.5C9—N5—Cd1i122.4 (3)
N3—C7—H7B109.5C9—C8—N4106.4 (4)
N4—C7—H7A109.5C9—C8—H8126.8
N4—C7—H7B109.5C10—N4—C7127.6 (3)
N4—C8—H8126.8C10—N4—C8107.8 (3)
N4—C10—C11126.0 (3)C10—N5—Cd1i129.4 (3)
N5i—Cd1—I1106.59 (8)C10—N5—C9107.5 (3)
N5i—Cd1—I2112.86 (8)C10—C11—H11B108.7
N5i—Cd1—N199.31 (11)C10—C11—H11A108.7
N5—C9—H9125.4C10—C11—C12114.1 (3)
N5—C10—N4109.1 (3)C11—C12—H12B109.5
N5—C10—C11124.9 (3)C11—C12—H12C109.5
C1—N3—C7128.9 (3)C11—C12—H12A109.5
C1—C2—C3121.0 (4)H11B—C11—H11A107.6
C1—C6—H6122.4C12—C11—H11B108.7
C2—N1—Cd1136.6 (2)C12—C11—H11A108.7
C2—C3—H3121.9H12B—C12—H12C109.5
C3—C4—H4119.1H12B—C12—H12A109.5
C3—C4—C5121.9 (4)H12C—C12—H12A109.5
I1—Cd1—N1—N2−66.6 (2)N5i—Cd1—N1—C2−133.4 (4)
I1—Cd1—N1—C2115.3 (3)N5—C10—C11—C1290.2 (5)
I2—Cd1—N1—N2162.7 (2)C1—N3—C7—N490.9 (4)
I2—Cd1—N1—C2−15.4 (4)C1—C2—C3—C41.4 (6)
Cd1—N1—N2—N3−178.4 (2)C2—N1—N2—N30.2 (4)
Cd1—N1—C2—C1178.3 (3)C2—C1—C6—C51.6 (6)
Cd1—N1—C2—C3−1.7 (6)C2—C3—C4—C50.2 (6)
Cd1i—N5—C9—C8171.0 (2)C3—C4—C5—C6−1.0 (7)
Cd1i—N5—C10—N4−169.5 (2)C4—C5—C6—C10.1 (6)
Cd1i—N5—C10—C1111.7 (5)C6—C1—C2—N1177.6 (3)
N1—N2—N3—C1−0.5 (4)C6—C1—C2—C3−2.4 (6)
N1—N2—N3—C7172.9 (3)C7—N3—C1—C2−172.0 (3)
N1—C2—C3—C4−178.6 (4)C7—N3—C1—C610.3 (7)
N2—N1—C2—C10.1 (4)C7—N4—C8—C9177.7 (3)
N2—N1—C2—C3−179.9 (4)C7—N4—C10—N5−177.4 (3)
N2—N3—C1—C20.5 (4)C7—N4—C10—C111.3 (6)
N2—N3—C1—C6−177.1 (4)C8—N4—C7—N3−69.3 (5)
N2—N3—C7—N4−81.1 (4)C8—N4—C10—N5−0.9 (4)
N3—C1—C2—N1−0.4 (4)C8—N4—C10—C11177.9 (3)
N3—C1—C2—C3179.6 (3)C9—N5—C10—N40.4 (4)
N3—C1—C6—C5178.9 (4)C9—N5—C10—C11−178.4 (3)
N4—C8—C9—N5−0.8 (4)C10—N4—C7—N3106.8 (4)
N4—C10—C11—C12−88.4 (5)C10—N4—C8—C91.0 (4)
N5i—Cd1—N1—N244.7 (3)C10—N5—C9—C80.3 (4)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dichloridobis[2-(2-fur-yl)-1-(2-furylmeth-yl)-1H-benzimidazole-κN]cadmium(II).

Authors:  Xia Wang; Yu-Xian Li; Yan-Ju Liu; Huai-Xia Yang; Cong-Cong Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-04
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.