Literature DB >> 21836833

(2-Acetyl-phenolato)(2-{1-[2-(morpholin-4-yl)ethyl-imino]-eth-yl}phenolato)(thio-cyanato-κN)-cobalt(III).

Chen-Yi Wang1.   

Abstract

The title mononuclear cobalt(III) complex, [Co(C(14)H(19)N(2)O(2))(C(8)H(7)O(2))(NCS)], was obtained by the reaction of 2-acetyl-phenol, 2-(morpholin-4-yl)ethyl-amine, ammonium thio-cyan-ate and cobalt nitrate in methanol. The Co(III) atom is coordinated by one phenolate O, one imine N, and one amine N atom of the tridentate Schiff base ligand, two O atoms of the 2-acetyl-phenolate anion and one thio-cyanate N atom. This results in a fairly regular fac-CoN(3)O(3) octa-hedral coordination geometry for the metal ion. The dihedral angle between the two benzene rings is 88.3 (3)°.

Entities:  

Year:  2011        PMID: 21836833      PMCID: PMC3151850          DOI: 10.1107/S1600536811025116

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to urease inhibitors, see: Wang (2009 ▶); Wang & Ye (2011 ▶). For similar cobalt(III) complexes, see: Li et al. (2007 ▶, 2008 ▶); Liu (2010 ▶); Wu et al. (2011 ▶).

Experimental

Crystal data

[Co(C14H19N2O2)(C8H7O2)(NCS)] M = 499.46 Monoclinic, a = 8.145 (2) Å b = 15.801 (2) Å c = 17.702 (3) Å β = 102.687 (3)° V = 2222.6 (7) Å3 Z = 4 Mo Kα radiation μ = 0.90 mm−1 T = 298 K 0.32 × 0.30 × 0.28 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.761, T max = 0.786 13159 measured reflections 4588 independent reflections 2764 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.101 S = 1.03 4588 reflections 291 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811025116/hb5932sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025116/hb5932Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C14H19N2O2)(C8H7O2)(NCS)]F(000) = 1040
Mr = 499.46Dx = 1.493 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.145 (2) ÅCell parameters from 2215 reflections
b = 15.801 (2) Åθ = 2.5–24.5°
c = 17.702 (3) ŵ = 0.90 mm1
β = 102.687 (3)°T = 298 K
V = 2222.6 (7) Å3Block, brown
Z = 40.32 × 0.30 × 0.28 mm
Bruker SMART CCD diffractometer4588 independent reflections
Radiation source: fine-focus sealed tube2764 reflections with I > 2σ(I)
graphiteRint = 0.047
ω scansθmax = 26.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→9
Tmin = 0.761, Tmax = 0.786k = −15→19
13159 measured reflectionsl = −21→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0387P)2 + 0.1364P] where P = (Fo2 + 2Fc2)/3
4588 reflections(Δ/σ)max < 0.001
291 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.10480 (5)0.75033 (2)0.40903 (2)0.04240 (14)
N10.2071 (3)0.84863 (14)0.45991 (14)0.0451 (6)
N20.2519 (3)0.76544 (13)0.32944 (13)0.0423 (6)
N3−0.0691 (3)0.81713 (16)0.34625 (15)0.0553 (7)
O10.0119 (2)0.64890 (12)0.35843 (11)0.0511 (5)
O20.2783 (2)0.69333 (11)0.47566 (10)0.0445 (5)
O3−0.0305 (2)0.73184 (12)0.47967 (12)0.0545 (6)
O40.3888 (3)0.69744 (15)0.20174 (14)0.0762 (7)
S1−0.30242 (11)0.92290 (6)0.25423 (5)0.0708 (3)
C10.1654 (3)0.55174 (17)0.45072 (16)0.0406 (7)
C20.1808 (4)0.46685 (18)0.47754 (18)0.0481 (7)
H20.10940.42610.45010.058*
C30.2958 (4)0.44293 (19)0.54166 (18)0.0542 (8)
H30.30120.38700.55850.065*
C40.4056 (4)0.5034 (2)0.58189 (17)0.0510 (8)
H40.48680.48730.62510.061*
C50.3955 (3)0.58572 (18)0.55864 (16)0.0432 (7)
H50.47010.62490.58660.052*
C60.2756 (3)0.61332 (18)0.49350 (16)0.0399 (7)
C70.0426 (3)0.57306 (18)0.38210 (17)0.0429 (7)
C8−0.0548 (4)0.50563 (19)0.33162 (17)0.0603 (9)
H8A−0.14530.53110.29470.090*
H8B−0.09970.46620.36310.090*
H8C0.01850.47630.30470.090*
C9−0.0742 (4)0.79083 (19)0.52384 (16)0.0465 (7)
C10−0.2153 (4)0.7738 (2)0.55482 (18)0.0576 (9)
H10−0.27440.72360.54190.069*
C11−0.2673 (4)0.8297 (2)0.60370 (19)0.0673 (9)
H11−0.36060.81690.62390.081*
C12−0.1830 (5)0.9046 (2)0.62323 (19)0.0711 (10)
H12−0.22080.94310.65530.085*
C13−0.0427 (4)0.9222 (2)0.59514 (17)0.0614 (9)
H130.01560.97220.61000.074*
C140.0158 (4)0.86696 (18)0.54447 (16)0.0468 (7)
C150.1688 (4)0.88750 (17)0.51812 (17)0.0473 (7)
C160.2859 (4)0.95472 (19)0.56150 (17)0.0659 (9)
H16A0.39960.94220.55840.099*
H16B0.27790.95530.61480.099*
H16C0.25441.00910.53880.099*
C170.3581 (4)0.86927 (19)0.43098 (18)0.0557 (8)
H17A0.45180.83440.45660.067*
H17B0.38830.92820.44140.067*
C180.3200 (4)0.85313 (18)0.34579 (17)0.0535 (8)
H18A0.42170.85950.32630.064*
H18B0.23810.89400.31960.064*
C190.1570 (4)0.75906 (19)0.24703 (16)0.0548 (8)
H19A0.07480.80430.23630.066*
H19B0.09670.70570.23970.066*
C200.2705 (5)0.7645 (2)0.19053 (18)0.0676 (10)
H20A0.20310.76220.13810.081*
H20B0.32980.81810.19710.081*
C210.4903 (4)0.7038 (2)0.2774 (2)0.0716 (10)
H21A0.55250.75660.28200.086*
H21B0.57120.65780.28570.086*
C220.3886 (3)0.70057 (19)0.33915 (17)0.0545 (8)
H22A0.33870.64480.33880.065*
H22B0.46380.70850.38930.065*
C23−0.1659 (4)0.86167 (19)0.30900 (18)0.0475 (8)
U11U22U33U12U13U23
Co10.0373 (2)0.0384 (2)0.0506 (3)−0.00521 (18)0.00765 (17)−0.00324 (19)
N10.0408 (14)0.0395 (14)0.0524 (16)−0.0071 (11)0.0048 (12)−0.0005 (12)
N20.0401 (13)0.0395 (15)0.0455 (14)−0.0035 (11)0.0054 (11)0.0020 (11)
N30.0447 (16)0.0499 (16)0.0682 (19)0.0013 (13)0.0055 (14)−0.0069 (14)
O10.0479 (12)0.0509 (14)0.0541 (13)−0.0085 (10)0.0101 (10)−0.0053 (10)
O20.0446 (11)0.0380 (12)0.0486 (12)−0.0066 (9)0.0053 (9)0.0015 (10)
O30.0544 (13)0.0459 (13)0.0688 (15)−0.0115 (10)0.0257 (12)−0.0131 (10)
O40.0883 (18)0.0750 (18)0.0742 (17)−0.0075 (15)0.0372 (15)−0.0125 (14)
S10.0555 (5)0.0781 (7)0.0741 (6)0.0045 (5)0.0040 (5)0.0192 (5)
C10.0392 (16)0.0378 (17)0.0484 (18)−0.0029 (13)0.0175 (14)−0.0080 (14)
C20.0455 (17)0.0415 (18)0.061 (2)−0.0057 (15)0.0198 (16)−0.0056 (16)
C30.061 (2)0.0387 (18)0.066 (2)0.0023 (16)0.0217 (18)0.0027 (16)
C40.0480 (18)0.053 (2)0.0512 (19)0.0055 (16)0.0098 (15)0.0027 (16)
C50.0437 (17)0.0459 (18)0.0406 (17)−0.0035 (14)0.0104 (14)−0.0018 (14)
C60.0390 (16)0.0432 (18)0.0419 (18)−0.0041 (14)0.0187 (14)−0.0045 (14)
C70.0395 (16)0.0409 (18)0.0525 (19)−0.0070 (14)0.0192 (14)−0.0069 (15)
C80.061 (2)0.056 (2)0.063 (2)−0.0134 (17)0.0116 (17)−0.0185 (17)
C90.0444 (17)0.0449 (18)0.0476 (18)0.0045 (15)0.0048 (14)−0.0029 (15)
C100.052 (2)0.061 (2)0.062 (2)−0.0026 (16)0.0190 (17)−0.0055 (17)
C110.066 (2)0.079 (3)0.061 (2)0.008 (2)0.0220 (19)−0.003 (2)
C120.082 (3)0.072 (3)0.061 (2)0.017 (2)0.020 (2)−0.014 (2)
C130.079 (2)0.050 (2)0.053 (2)0.0022 (18)0.0078 (19)−0.0107 (16)
C140.0533 (18)0.0416 (18)0.0418 (18)0.0037 (15)0.0024 (15)0.0011 (14)
C150.0552 (19)0.0342 (16)0.0464 (19)0.0005 (15)−0.0023 (16)0.0064 (14)
C160.077 (2)0.052 (2)0.062 (2)−0.0169 (18)0.0025 (19)−0.0124 (17)
C170.0499 (19)0.0502 (19)0.067 (2)−0.0137 (15)0.0132 (17)−0.0100 (17)
C180.0531 (19)0.0438 (19)0.065 (2)−0.0103 (15)0.0165 (16)0.0020 (16)
C190.0546 (19)0.060 (2)0.0465 (19)−0.0074 (16)0.0047 (15)0.0000 (16)
C200.078 (2)0.077 (3)0.048 (2)−0.015 (2)0.0146 (18)−0.0008 (18)
C210.060 (2)0.074 (3)0.088 (3)0.006 (2)0.033 (2)0.010 (2)
C220.0481 (18)0.052 (2)0.068 (2)0.0062 (16)0.0220 (16)0.0108 (17)
C230.0411 (18)0.0464 (19)0.057 (2)−0.0080 (15)0.0137 (15)−0.0085 (16)
Co1—O11.9094 (19)C8—H8C0.9600
Co1—O21.8621 (18)C9—C101.404 (4)
Co1—O31.8624 (19)C9—C141.414 (4)
Co1—N11.894 (2)C10—C111.368 (4)
Co1—N31.914 (3)C10—H100.9300
Co1—N22.054 (2)C11—C121.374 (4)
N1—C151.295 (3)C11—H110.9300
N1—C171.469 (3)C12—C131.371 (4)
N2—C221.495 (3)C12—H120.9300
N2—C191.497 (3)C13—C141.408 (4)
N2—C181.497 (3)C13—H130.9300
N3—C231.150 (3)C14—C151.460 (4)
O1—C71.276 (3)C15—C161.519 (4)
O2—C61.304 (3)C16—H16A0.9600
O3—C91.315 (3)C16—H16B0.9600
O4—C211.415 (4)C16—H16C0.9600
O4—C201.416 (4)C17—C181.493 (4)
S1—C231.625 (3)C17—H17A0.9700
C1—C21.419 (4)C17—H17B0.9700
C1—C61.424 (4)C18—H18A0.9700
C1—C71.434 (4)C18—H18B0.9700
C2—C31.357 (4)C19—C201.506 (4)
C2—H20.9300C19—H19A0.9700
C3—C41.393 (4)C19—H19B0.9700
C3—H30.9300C20—H20A0.9700
C4—C51.362 (4)C20—H20B0.9700
C4—H40.9300C21—C221.510 (4)
C5—C61.407 (4)C21—H21A0.9700
C5—H50.9300C21—H21B0.9700
C7—C81.500 (4)C22—H22A0.9700
C8—H8A0.9600C22—H22B0.9700
C8—H8B0.9600
O2—Co1—O388.70 (8)C11—C10—H10119.4
O2—Co1—N184.38 (9)C9—C10—H10119.4
O3—Co1—N194.17 (9)C10—C11—C12120.6 (3)
O2—Co1—O193.36 (8)C10—C11—H11119.7
O3—Co1—O187.21 (8)C12—C11—H11119.7
N1—Co1—O1177.31 (9)C13—C12—C11119.6 (3)
O2—Co1—N3175.10 (9)C13—C12—H12120.2
O3—Co1—N390.27 (10)C11—C12—H12120.2
N1—Co1—N390.93 (10)C12—C13—C14122.1 (3)
O1—Co1—N391.38 (9)C12—C13—H13119.0
O2—Co1—N290.86 (8)C14—C13—H13119.0
O3—Co1—N2177.51 (8)C13—C14—C9117.6 (3)
N1—Co1—N288.22 (9)C13—C14—C15119.9 (3)
O1—Co1—N290.37 (8)C9—C14—C15122.5 (3)
N3—Co1—N290.37 (10)N1—C15—C14121.4 (3)
C15—N1—C17122.6 (2)N1—C15—C16120.0 (3)
C15—N1—Co1127.5 (2)C14—C15—C16118.7 (3)
C17—N1—Co1109.32 (18)C15—C16—H16A109.5
C22—N2—C19106.1 (2)C15—C16—H16B109.5
C22—N2—C18112.2 (2)H16A—C16—H16B109.5
C19—N2—C18109.9 (2)C15—C16—H16C109.5
C22—N2—Co1111.92 (16)H16A—C16—H16C109.5
C19—N2—Co1114.01 (17)H16B—C16—H16C109.5
C18—N2—Co1102.84 (16)N1—C17—C18108.0 (2)
C23—N3—Co1175.3 (2)N1—C17—H17A110.1
C7—O1—Co1127.26 (19)C18—C17—H17A110.1
C6—O2—Co1124.85 (17)N1—C17—H17B110.1
C9—O3—Co1124.42 (18)C18—C17—H17B110.1
C21—O4—C20108.5 (3)H17A—C17—H17B108.4
C2—C1—C6118.0 (3)C17—C18—N2109.8 (2)
C2—C1—C7119.9 (3)C17—C18—H18A109.7
C6—C1—C7122.1 (3)N2—C18—H18A109.7
C3—C2—C1122.5 (3)C17—C18—H18B109.7
C3—C2—H2118.8N2—C18—H18B109.7
C1—C2—H2118.8H18A—C18—H18B108.2
C2—C3—C4119.0 (3)N2—C19—C20112.5 (2)
C2—C3—H3120.5N2—C19—H19A109.1
C4—C3—H3120.5C20—C19—H19A109.1
C5—C4—C3120.8 (3)N2—C19—H19B109.1
C5—C4—H4119.6C20—C19—H19B109.1
C3—C4—H4119.6H19A—C19—H19B107.8
C4—C5—C6121.9 (3)O4—C20—C19111.3 (3)
C4—C5—H5119.0O4—C20—H20A109.4
C6—C5—H5119.0C19—C20—H20A109.4
O2—C6—C5117.0 (3)O4—C20—H20B109.4
O2—C6—C1125.2 (3)C19—C20—H20B109.4
C5—C6—C1117.9 (3)H20A—C20—H20B108.0
O1—C7—C1123.3 (3)O4—C21—C22112.6 (3)
O1—C7—C8115.6 (3)O4—C21—H21A109.1
C1—C7—C8121.1 (3)C22—C21—H21A109.1
C7—C8—H8A109.5O4—C21—H21B109.1
C7—C8—H8B109.5C22—C21—H21B109.1
H8A—C8—H8B109.5H21A—C21—H21B107.8
C7—C8—H8C109.5N2—C22—C21114.0 (2)
H8A—C8—H8C109.5N2—C22—H22A108.8
H8B—C8—H8C109.5C21—C22—H22A108.8
O3—C9—C10116.6 (3)N2—C22—H22B108.8
O3—C9—C14124.3 (3)C21—C22—H22B108.8
C10—C9—C14119.0 (3)H22A—C22—H22B107.6
C11—C10—C9121.1 (3)N3—C23—S1178.3 (3)
Table 1

Selected bond lengths (Å)

Co1—O11.9094 (19)
Co1—O21.8621 (18)
Co1—O31.8624 (19)
Co1—N11.894 (2)
Co1—N31.914 (3)
Co1—N22.054 (2)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Tris[2-(propyl-imino-meth-yl)phenolato-κN,O]cobalt(III).

Authors:  Sheng Li; Shou-Bin Wang; Kun Tang; Yuan-Fang Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-17

3.  Chloridobis[N'-(2-meth-oxy-benzyl-idene)-4-nitro-benzohydrazidato-κO,N'](4-methyl-pyridine-κN)cobalt(III).

Authors:  Qiong-Jie Wu; Xiao-Hua Chen; Jiang Jiang; Bi-Qiong Cai; Yong-Ping Xie
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-02

4.  {4-Chloro-2-[(2-hy-droxy-eth-yl)imino-meth-yl]phenolato}{4-chloro-2-[(2-oxido-eth-yl)imino-meth-yl]phenolato}cobalt(III).

Authors:  Li-Jun Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-21
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.