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Literature DB >> 2183409

Structure predictions of membrane proteins are not that bad.

Abstract

A simple generalization of the well-known hydrophobicity analysis is sufficient to predict membrane-spanning amphiphilic alpha-helices and beta-strands. The use of this method is illustrated for bacteriorhodopsin, OmpA protein and the photosynthetic reaction centre.

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Year: 1990 PMID： 2183409 DOI： 10.1016/0968-0004(90)90188-h

Source DB: PubMed Journal: Trends Biochem Sci ISSN： 0968-0004 Impact factor: 13.807

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Cited

33 in total

1. The Arabidopsis nuclear DAL gene encodes a chloroplast protein which is required for the maturation of the plastid ribosomal RNAs and is essential for chloroplast differentiation.

Authors: Cordelia Bisanz; Laurent Bégot; Pierre Carol; Pascual Perez; Muriel Bligny; Hélène Pesey; Jean-Luc Gallois; Silva Lerbs-Mache; Régis Mache
Journal: Plant Mol Biol Date: 2003-03 Impact factor: 4.076

2. Antigenic sites on porin of Haemophilus influenzae type b: mapping with synthetic peptides and evaluation of structure predictions.

Authors: R Srikumar; D Dahan; M F Gras; M J Ratcliffe; L van Alphen; J W Coulton
Journal: J Bacteriol Date: 1992-06 Impact factor: 3.490

10. Yeast KRE2 defines a new gene family encoding probable secretory proteins, and is required for the correct N-glycosylation of proteins.

Authors: K Hill; C Boone; M Goebl; R Puccia; A M Sdicu; H Bussey
Journal: Genetics Date: 1992-02 Impact factor: 4.562

Structure predictions of membrane proteins are not that bad.

1. The Arabidopsis nuclear DAL gene encodes a chloroplast protein which is required for the maturation of the plastid ribosomal RNAs and is essential for chloroplast differentiation.

2. Antigenic sites on porin of Haemophilus influenzae type b: mapping with synthetic peptides and evaluation of structure predictions.

Review 3. Bacteriophage lysis: mechanism and regulation.

Review 4. Type V protein secretion pathway: the autotransporter story.

5. Definition of surface-exposed epitopes on the (Ca(2+)-Mg2+)-ATPase of sarcoplasmic reticulum.

6. Targeting of proteins to the outer envelope membrane uses a different pathway than transport into chloroplasts.

7. Reevaluation of hydropathy profiles of voltage-gated ionic channels.

8. Prediction by a neural network of outer membrane beta-strand protein topology.

9. Membrane insertion of uracil permease, a polytopic yeast plasma membrane protein.

10. Yeast KRE2 defines a new gene family encoding probable secretory proteins, and is required for the correct N-glycosylation of proteins.