Literature DB >> 21826490

The relevance of conditional dispersal for bacterial colony growth and biodegradation.

Thomas Banitz1, Karin Johst, Lukas Y Wick, Ingo Fetzer, Hauke Harms, Karin Frank.   

Abstract

Bacterial degradation is an ecosystem service that offers a promising method for the remediation of contaminated soils. To assess the dynamics and efficiency of bacterial degradation, reliable microbial simulation models, along with the relevant processes, are required. We present an approach aimed at improving reliability by studying the relevance and implications of an important concept from theoretical ecology in the context of a bacterial system: conditional dispersal denoting that the dispersal strategy depends on environmental conditions. Different dispersal strategies, which either incorporate or neglect this concept, are implemented in a bacterial model and results are compared to data obtained from laboratory experiments with Pseudomonas putida colonies growing on glucose agar. Our results show that, with respect to the condition of resource uptake, the model's correspondence to experimental data is significantly higher for conditional than for unconditional bacterial dispersal. In particular, these results support the hypothesis that bacteria disperse less when resources are abundant. We also show that the dispersal strategy has a considerable impact on model predictions for bacterial degradation of resources: disregarding conditional bacterial dispersal can lead to overestimations when assessing the performance of this ecosystem service.

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Year:  2011        PMID: 21826490     DOI: 10.1007/s00248-011-9927-3

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  31 in total

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Review 2.  Mathematical modelling of biofilm structures.

Authors:  M C M van Loosdrecht; J J Heijnen; H Eberl; J Kreft; C Picioreanu
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3.  Hydrodynamics of bacterial colonies: phase diagrams.

Authors:  J Lega; T Passot
Journal:  Chaos       Date:  2004-09       Impact factor: 3.642

4.  Hypothesis for the role of nutrient starvation in biofilm detachment.

Authors:  Stephen M Hunt; Erin M Werner; Baochuan Huang; Martin A Hamilton; Philip S Stewart
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Review 5.  Causes and consequences of animal dispersal strategies: relating individual behaviour to spatial dynamics.

Authors:  Diana E Bowler; Tim G Benton
Journal:  Biol Rev Camb Philos Soc       Date:  2005-05

Review 6.  Dynamics of development and dispersal in sessile microbial communities: examples from Pseudomonas aeruginosa and Pseudomonas putida model biofilms.

Authors:  Mikkel Klausen; Morten Gjermansen; Jan-Ulrich Kreft; Tim Tolker-Nielsen
Journal:  FEMS Microbiol Lett       Date:  2006-08       Impact factor: 2.742

7.  The population dynamics of bacteria in physically structured habitats and the adaptive virtue of random motility.

Authors:  Yan Wei; Xiaolin Wang; Jingfang Liu; Ilya Nememan; Amoolya H Singh; Howie Weiss; Bruce R Levin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-15       Impact factor: 11.205

8.  Spatial synchrony through density-independent versus density-dependent dispersal.

Authors:  Tamara Münkemüller; Karin Johst
Journal:  J Biol Dyn       Date:  2008-01       Impact factor: 2.179

9.  Transmissible plasmid coding early enzymes of naphthalene oxidation in Pseudomonas putida.

Authors:  N W Dunn; I C Gunsalus
Journal:  J Bacteriol       Date:  1973-06       Impact factor: 3.490

10.  Modeling taxa-abundance distributions in microbial communities using environmental sequence data.

Authors:  William T Sloan; Stephen Woodcock; Mary Lunn; Ian M Head; Thomas P Curtis
Journal:  Microb Ecol       Date:  2006-12-13       Impact factor: 4.192

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  7 in total

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2.  Burkholderia terrae BS001 migrates proficiently with diverse fungal hosts through soil and provides protection from antifungal agents.

Authors:  Rashid Nazir; Diana I Tazetdinova; Jan Dirk van Elsas
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3.  Mycelia as a focal point for horizontal gene transfer among soil bacteria.

Authors:  Tom Berthold; Florian Centler; Thomas Hübschmann; Rita Remer; Martin Thullner; Hauke Harms; Lukas Y Wick
Journal:  Sci Rep       Date:  2016-11-04       Impact factor: 4.379

4.  Migration of Paraburkholderia terrae BS001 Along Old Fungal Hyphae in Soil at Various pH Levels.

Authors:  Pu Yang; Renata Oliveira da Rocha Calixto; Jan Dirk van Elsas
Journal:  Microb Ecol       Date:  2018-01-10       Impact factor: 4.552

Review 5.  Calibrating spatiotemporal models of microbial communities to microscopy data: A review.

Authors:  Aaron Yip; Julien Smith-Roberge; Sara Haghayegh Khorasani; Marc G Aucoin; Brian P Ingalls
Journal:  PLoS Comput Biol       Date:  2022-10-13       Impact factor: 4.779

6.  Functional Resistance to Recurrent Spatially Heterogeneous Disturbances Is Facilitated by Increased Activity of Surviving Bacteria in a Virtual Ecosystem.

Authors:  Sara König; Anja Worrich; Thomas Banitz; Hauke Harms; Matthias Kästner; Anja Miltner; Lukas Y Wick; Karin Frank; Martin Thullner; Florian Centler
Journal:  Front Microbiol       Date:  2018-04-11       Impact factor: 5.640

7.  Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems.

Authors:  Sara König; Anja Worrich; Thomas Banitz; Florian Centler; Hauke Harms; Matthias Kästner; Anja Miltner; Lukas Y Wick; Martin Thullner; Karin Frank
Journal:  Sci Rep       Date:  2018-06-22       Impact factor: 4.379

  7 in total

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