Literature DB >> 21823755

Flux balance analysis for ethylene formation in genetically engineered Saccharomyces cerevisiae.

C Larsson1, J L Snoep, J Norbeck, E Albers.   

Abstract

Biosynthesis of ethylene (ethene) is mainly performed by plants and some bacteria and fungi, via two distinct metabolic routes. Plants use two steps, starting with S-adenosylmethionine, while the ethylene-forming microbes perform an oxygen dependent reaction using 2-oxoglutarate and arginine. Introduction of these systems into Saccharomyces cerevisiae was studied in silico. The reactions were added to a metabolic network of yeast and flux over the two networks was optimised for maximal ethylene formation. The maximal ethylene yields obtained for the two systems were similar in the range of 7-8 mol ethylene/10 mol glucose. The microbial metabolic network was used for testing different strategies to increase the ethylene formation. It was suggested that supplementation of exogenous proline, using a solely NAD-coupled glutamate dehydrogenase, and using glutamate as the nitrogen source, could increase the ethylene formation. Comparison of these in silico results with published experimental data for yeast expressing the microbial system confirmed an increased ethylene formation when changing nitrogen source from ammonium to glutamate. The theoretical analysis methods indicated a much higher maximal yield per glucose for ethylene than was experimentally observed. However, such high ethylene yields could only be obtained with a concomitant very high respiration (per glucose). Accordingly, when ethylene production was optimised under the additional constraint of restricted respiratory capacity (i.e. limited to experimentally measured values) the theoretical maximal ethylene yield was much lower at 0.2/10 mol glucose, and closer to the experimentally observed values.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21823755     DOI: 10.1049/iet-syb.2010.0027

Source DB:  PubMed          Journal:  IET Syst Biol        ISSN: 1751-8849            Impact factor:   1.615


  5 in total

1.  CONSTRICTOR: constraint modification provides insight into design of biochemical networks.

Authors:  Keesha E Erickson; Ryan T Gill; Anushree Chatterjee
Journal:  PLoS One       Date:  2014-11-25       Impact factor: 3.240

2.  Comparative sequence analysis and mutagenesis of ethylene forming enzyme (EFE) 2-oxoglutarate/Fe(II)-dependent dioxygenase homologs.

Authors:  Nina Johansson; Karl O Persson; Christer Larsson; Joakim Norbeck
Journal:  BMC Biochem       Date:  2014-10-02       Impact factor: 4.059

3.  Ethylene-forming enzyme and bioethylene production.

Authors:  Carrie Eckert; Wu Xu; Wei Xiong; Sean Lynch; Justin Ungerer; Ling Tao; Ryan Gill; Pin-Ching Maness; Jianping Yu
Journal:  Biotechnol Biofuels       Date:  2014-03-03       Impact factor: 6.040

4.  Identification of factors for improved ethylene production via the ethylene forming enzyme in chemostat cultures of Saccharomyces cerevisiae.

Authors:  Nina Johansson; Paul Quehl; Joakim Norbeck; Christer Larsson
Journal:  Microb Cell Fact       Date:  2013-10-01       Impact factor: 5.328

5.  Overcoming substrate limitations for improved production of ethylene in E. coli.

Authors:  Sean Lynch; Carrie Eckert; Jianping Yu; Ryan Gill; Pin-Ching Maness
Journal:  Biotechnol Biofuels       Date:  2016-01-04       Impact factor: 6.040

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.