Literature DB >> 21821114

Cell growth and cell cycle in Saccharomyces cerevisiae: basic regulatory design and protein-protein interaction network.

Lilia Alberghina1, Gabriella Mavelli, Guido Drovandi, Pasquale Palumbo, Stefania Pessina, Farida Tripodi, Paola Coccetti, Marco Vanoni.   

Abstract

In this review we summarize the major connections between cell growth and cell cycle in the model eukaryote Saccharomyces cerevisiae. In S. cerevisiae regulation of cell cycle progression is achieved predominantly during a narrow interval in the late G1 phase known as START (Pringle and Hartwell, 1981). At START a yeast cell integrates environmental and internal signals (such as nutrient availability, presence of pheromone, attainment of a critical size, status of the metabolic machinery) and decides whether to enter a new cell cycle or to undertake an alternative developmental program. Several signaling pathways, that act to connect the nutritional status to cellular actions, are briefly outlined. A Growth & Cycle interaction network has been manually curated. More than one fifth of the edges within the Growth & Cycle network connect Growth and Cycle proteins, indicating a strong interconnection between the processes of cell growth and cell cycle. The backbone of the Growth & Cycle network is composed of middle-degree nodes suggesting that it shares some properties with HOT networks. The development of multi-scale modeling and simulation analysis will help to elucidate relevant central features of growth and cycle as well as to identify their system-level properties. Confident collaborative efforts involving different expertises will allow to construct consensus, integrated models effectively linking the processes of cell growth and cell cycle, ultimately contributing to shed more light also on diseases in which an altered proliferation ability is observed, such as cancer.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21821114     DOI: 10.1016/j.biotechadv.2011.07.010

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  22 in total

1.  Snf1 Phosphorylates Adenylate Cyclase and Negatively Regulates Protein Kinase A-dependent Transcription in Saccharomyces cerevisiae.

Authors:  Raffaele Nicastro; Farida Tripodi; Marco Gaggini; Andrea Castoldi; Veronica Reghellin; Simona Nonnis; Gabriella Tedeschi; Paola Coccetti
Journal:  J Biol Chem       Date:  2015-08-26       Impact factor: 5.157

2.  Cell dualism: presence of cells with alternative membrane potentials in growing populations of bacteria and yeasts.

Authors:  Volodymyr Ivanov; Saeid Rezaeinejad; Jian Chu
Journal:  J Bioenerg Biomembr       Date:  2013-05-03       Impact factor: 2.945

3.  A comparative study of Whi5 and retinoblastoma proteins: from sequence and structure analysis to intracellular networks.

Authors:  Md Mehedi Hasan; Stefania Brocca; Elena Sacco; Michela Spinelli; Elena Papaleo; Matteo Lambrughi; Lilia Alberghina; Marco Vanoni
Journal:  Front Physiol       Date:  2014-01-21       Impact factor: 4.566

4.  The DNA damage checkpoint response to replication stress: A Game of Forks.

Authors:  Rachel Jossen; Rodrigo Bermejo
Journal:  Front Genet       Date:  2013-03-13       Impact factor: 4.599

5.  Linkers of cell polarity and cell cycle regulation in the fission yeast protein interaction network.

Authors:  Federico Vaggi; James Dodgson; Archana Bajpai; Anatole Chessel; Ferenc Jordán; Masamitsu Sato; Rafael Edgardo Carazo-Salas; Attila Csikász-Nagy
Journal:  PLoS Comput Biol       Date:  2012-10-18       Impact factor: 4.475

6.  Cancer cell growth and survival as a system-level property sustained by enhanced glycolysis and mitochondrial metabolic remodeling.

Authors:  Lilia Alberghina; Daniela Gaglio; Cecilia Gelfi; Rosa M Moresco; Giancarlo Mauri; Paola Bertolazzi; Cristina Messa; Maria C Gilardi; Ferdinando Chiaradonna; Marco Vanoni
Journal:  Front Physiol       Date:  2012-09-12       Impact factor: 4.566

7.  A novel process-based model of microbial growth: self-inhibition in Saccharomyces cerevisiae aerobic fed-batch cultures.

Authors:  Stefano Mazzoleni; Carmine Landi; Fabrizio Cartenì; Elisabetta de Alteriis; Francesco Giannino; Lucia Paciello; Palma Parascandola
Journal:  Microb Cell Fact       Date:  2015-07-30       Impact factor: 5.328

Review 8.  S-adenosyl-L-homocysteine hydrolase and methylation disorders: yeast as a model system.

Authors:  Oksana Tehlivets; Nermina Malanovic; Myriam Visram; Tea Pavkov-Keller; Walter Keller
Journal:  Biochim Biophys Acta       Date:  2012-09-24

9.  Dynamic modeling of yeast meiotic initiation.

Authors:  Debjit Ray; Yongchun Su; Ping Ye
Journal:  BMC Syst Biol       Date:  2013-05-01

10.  Discovery of possible gene relationships through the application of self-organizing maps to DNA microarray databases.

Authors:  Rocio Chavez-Alvarez; Arturo Chavoya; Andres Mendez-Vazquez
Journal:  PLoS One       Date:  2014-04-03       Impact factor: 3.240

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