Literature DB >> 21819938

The Génolevures database.

Tiphaine Martin1, David J Sherman, Pascal Durrens.   

Abstract

The Génolevures online database (URL: http://www.genolevures.org) stores and provides the data and results obtained by the Génolevures Consortium through several campaigns of genome annotation of the yeasts in the Saccharomycotina subphylum (hemiascomycetes). This database is dedicated to large-scale comparison of these genomes, storing not only the different chromosomal elements detected in the sequences, but also the logical relations between them. The database is divided into a public part, accessible to anyone through Internet, and a private part where the Consortium members make genome annotations with our Magus annotation system; this system is used to annotate several related genomes in parallel. The public database is widely consulted and offers structured data, organized using a REST web site architecture that allows for automated requests. The implementation of the database, as well as its associated tools and methods, is evolving to cope with the influx of genome sequences produced by Next Generation Sequencing (NGS).
Copyright © 2011 Académie des sciences. Published by Elsevier SAS. All rights reserved.

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Year:  2011        PMID: 21819938     DOI: 10.1016/j.crvi.2011.05.004

Source DB:  PubMed          Journal:  C R Biol        ISSN: 1631-0691            Impact factor:   1.583


  5 in total

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3.  Comparative genome analysis and gene finding in Candida species using CGOB.

Authors:  Sarah L Maguire; Seán S ÓhÉigeartaigh; Kevin P Byrne; Markus S Schröder; Peadar O'Gaora; Kenneth H Wolfe; Geraldine Butler
Journal:  Mol Biol Evol       Date:  2013-03-13       Impact factor: 16.240

4.  PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

Authors:  Jaime Huerta-Cepas; Salvador Capella-Gutiérrez; Leszek P Pryszcz; Marina Marcet-Houben; Toni Gabaldón
Journal:  Nucleic Acids Res       Date:  2013-11-25       Impact factor: 16.971

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Authors:  G Romagnoli; M D Verhoeven; R Mans; Y Fleury Rey; R Bel-Rhlid; M van den Broek; R Maleki Seifar; A Ten Pierick; M Thompson; V Müller; S A Wahl; J T Pronk; J M Daran
Journal:  Mol Microbiol       Date:  2014-06-23       Impact factor: 3.501

  5 in total

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