Literature DB >> 21814812

Molecular characterization of eight Indian Snakehead species (Pisces: Perciformes Channidae) using RAPD markers.

Ajaz Ali Bhat1, M A Haniffa, P R Divya, A Gopalakrishnan, M James Milton, Raj Kumar, Bilal Ahmad Paray.   

Abstract

Murrels (Perciformes; Channidei; Channidae) are unique group of freshwater air breathing fishes having a confined distribution to African and Asian continents. The phylogenetic relationship among eight Channid species viz. Channa aurantimaculata, Channa bleheri, Channa diplogramma, Channa gachua, Channa marulius, Channa punctatus, Channa stewartii and Channa striatus were investigated using RAPD markers. Eight random oligodecamers viz. OPAC03, OPAC05, OPAC07, OPAC09, OPAC19, OPA10, OPA11 and OPA16 were used to generate the RAPD profile. Estimates of Nei's (Genetics, 89:583-590, 1978) unbiased genetic distance (D) demonstrated sufficient genetic divergence to discriminate the samples of different species and the values ranged from 0.3292 to 0.800 The present RAPD analyses strongly substantiate the view of earlier morphological and osteological studies of Channid species, the closer association among species in "gachua" and "marulius" groups.

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Year:  2011        PMID: 21814812     DOI: 10.1007/s11033-011-1213-4

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  3 in total

1.  Estimation of average heterozygosity and genetic distance from a small number of individuals.

Authors:  M Nei
Journal:  Genetics       Date:  1978-07       Impact factor: 4.562

2.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

3.  Molecular discrimination of six species of Bagrid catfishes from Indus river system using randomly amplified polymorphic DNA markers.

Authors:  Archana Saini; Anish Dua; Vindhya Mohindra; W S Lakra
Journal:  Mol Biol Rep       Date:  2010-02-02       Impact factor: 2.316

  3 in total
  3 in total

1.  Complete mitochondrial genome of a kind of snakehead fish Channa siamensis and its phylogenetic consideration.

Authors:  Rui Li; Gang Wang; Zheng-Yong Wen; Yuan-Chao Zou; Chuan-Jie Qin; Yu Luo; Jun Wang; Gui-Hong Chen
Journal:  Genes Genomics       Date:  2018-09-21       Impact factor: 1.839

2.  Molecular cloning and development of RAPD-SCAR markers for Dimocarpus longan variety authentication.

Authors:  Luquan Yang; Shelly Fu; Md Asaduzzaman Khan; Weimin Zeng; Junjiang Fu
Journal:  Springerplus       Date:  2013-10-03

3.  Calibrating snakehead diversity with DNA barcodes: expanding taxonomic coverage to enable identification of potential and established invasive species.

Authors:  Natasha R Serrao; Dirk Steinke; Robert H Hanner
Journal:  PLoS One       Date:  2014-06-10       Impact factor: 3.240

  3 in total

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