Literature DB >> 21813723

Novel sensitive real-time PCR for quantification of bacterial 16S rRNA genes in plasma of HIV-infected patients as a marker for microbial translocation.

M Kramski1, A J Gaeguta, G F Lichtfuss, R Rajasuriar, S M Crowe, M A French, S R Lewin, R J Center, D F J Purcell.   

Abstract

We developed a real-time PCR to quantify 16S rRNA gene levels in plasma from HIV-infected patients as a marker of microbial translocation. The assay uses shrimp nuclease (SNuc) to eliminate DNA contamination, giving high sensitivity and low variability. The 16S rRNA gene levels measured in plasma from HIV patients correlated significantly with lipopolysaccharide levels.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21813723      PMCID: PMC3187295          DOI: 10.1128/JCM.01018-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  20 in total

1.  Bacterial diversity within the human subgingival crevice.

Authors:  I Kroes; P W Lepp; D A Relman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

2.  Does blood of healthy subjects contain bacterial ribosomal DNA?

Authors:  S Nikkari; I J McLaughlin; W Bi; D E Dodge; D A Relman
Journal:  J Clin Microbiol       Date:  2001-05       Impact factor: 5.948

3.  16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates.

Authors:  M Drancourt; C Bollet; A Carlioz; R Martelin; J P Gayral; D Raoult
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

4.  Antiviral treatment with alpha interferon up-regulates CD14 on liver macrophages and its soluble form in patients with chronic hepatitis B.

Authors:  Patrizia Carotenuto; Debby van Riel; André Artsen; Sven Bruijns; Fons G Uytdehaag; Jon D Laman; Andeltje B van Nunen; Pieter E Zondervan; Robert A De Man; Albert D Osterhaus; Oscar Pontesilli
Journal:  Antimicrob Agents Chemother       Date:  2005-02       Impact factor: 5.191

5.  Intensification of antiretroviral therapy with raltegravir or addition of hyperimmune bovine colostrum in HIV-infected patients with suboptimal CD4+ T-cell response: a randomized controlled trial.

Authors:  Helen Byakwaga; Mark Kelly; Damian F J Purcell; Martyn A French; Janaki Amin; Sharon R Lewin; Hila Haskelberg; Anthony D Kelleher; Roger Garsia; Mark A Boyd; David A Cooper; Sean Emery
Journal:  J Infect Dis       Date:  2011-09-19       Impact factor: 5.226

6.  Frequent contamination of Taq polymerase with DNA.

Authors:  E C Böttger
Journal:  Clin Chem       Date:  1990-06       Impact factor: 8.327

7.  The complete nucleotide sequence of the ribosomal 16-S RNA from Excherichia coli. Experimental details and cistron heterogeneities.

Authors:  P Carbon; C Ehresmann; B Ehresmann; J P Ebel
Journal:  Eur J Biochem       Date:  1979-10-15

Review 8.  Enteric bacteria, lipopolysaccharides and related cytokines in inflammatory bowel disease: biological and clinical significance.

Authors:  L Caradonna; L Amati; T Magrone; N M Pellegrino; E Jirillo; D Caccavo
Journal:  J Endotoxin Res       Date:  2000

9.  The macrophage activity marker sCD14 is increased in patients with multiple sclerosis and upregulated by interferon beta-1b.

Authors:  J Brettschneider; D Ecker; A Bitsch; D Bahner; T Bogumil; A Dressel; E Elitok; B Kitze; S Poser; F Weber; H Tumani
Journal:  J Neuroimmunol       Date:  2002-12       Impact factor: 3.478

Review 10.  Endotoxemia: methods of detection and clinical correlates.

Authors:  J C Hurley
Journal:  Clin Microbiol Rev       Date:  1995-04       Impact factor: 26.132

View more
  21 in total

1.  Occurrence of Fungal DNA Contamination in PCR Reagents: Approaches to Control and Decontamination.

Authors:  S Czurda; S Smelik; S Preuner-Stix; F Nogueira; T Lion
Journal:  J Clin Microbiol       Date:  2015-11-11       Impact factor: 5.948

Review 2.  Microbial translocation in the pathogenesis of HIV infection and AIDS.

Authors:  Giulia Marchetti; Camilla Tincati; Guido Silvestri
Journal:  Clin Microbiol Rev       Date:  2013-01       Impact factor: 26.132

Review 3.  Microbial translocation, immune activation, and HIV disease.

Authors:  Nichole R Klatt; Nicholas T Funderburg; Jason M Brenchley
Journal:  Trends Microbiol       Date:  2012-10-11       Impact factor: 17.079

Review 4.  Microbial translocation in HIV infection: causes, consequences and treatment opportunities.

Authors:  Netanya G Sandler; Daniel C Douek
Journal:  Nat Rev Microbiol       Date:  2012-08-13       Impact factor: 60.633

5.  Immune activation is associated with increased gut microbial translocation in treatment-naive, HIV-infected children in a resource-limited setting.

Authors:  Sudheesh Pilakka-Kanthikeel; Arheart Kris; Anbalagan Selvaraj; Soumya Swaminathan; Savita Pahwa
Journal:  J Acquir Immune Defic Syndr       Date:  2014-05-01       Impact factor: 3.731

6.  Gut Lactobacillales are associated with higher CD4 and less microbial translocation during HIV infection.

Authors:  Josué Pérez-Santiago; Sara Gianella; Marta Massanella; Celsa A Spina; Maile Y Karris; Susanna R Var; Derek Patel; Parris S Jordan; Jason A Young; Susan J Little; Douglas D Richman; Davey M Smith
Journal:  AIDS       Date:  2013-07-31       Impact factor: 4.177

7.  Short communication: Evidence that microbial translocation occurs in HIV-infected children in the United Kingdom.

Authors:  Felicity Fitzgerald; Kathryn Harris; Ronan Doyle; Dagmar Alber; Nigel Klein
Journal:  AIDS Res Hum Retroviruses       Date:  2013-10-02       Impact factor: 2.205

8.  A faecal microbiota signature with high specificity for pancreatic cancer.

Authors:  Ece Kartal; Thomas S B Schmidt; Esther Molina-Montes; Sandra Rodríguez-Perales; Jakob Wirbel; Oleksandr M Maistrenko; Wasiu A Akanni; Bilal Alashkar Alhamwe; Renato J Alves; Alfredo Carrato; Hans-Peter Erasmus; Lidia Estudillo; Fabian Finkelmeier; Anthony Fullam; Anna M Glazek; Paulina Gómez-Rubio; Rajna Hercog; Ferris Jung; Stefanie Kandels; Stephan Kersting; Melanie Langheinrich; Mirari Márquez; Xavier Molero; Askarbek Orakov; Thea Van Rossum; Raul Torres-Ruiz; Anja Telzerow; Konrad Zych; Vladimir Benes; Georg Zeller; Jonel Trebicka; Francisco X Real; Nuria Malats; Peer Bork
Journal:  Gut       Date:  2022-03-08       Impact factor: 31.793

Review 9.  HIV-associated neurocognitive disorders: the relationship of HIV infection with physical and social comorbidities.

Authors:  Ellen M Tedaldi; Nancy L Minniti; Tracy Fischer
Journal:  Biomed Res Int       Date:  2015-03-01       Impact factor: 3.411

10.  Development of a broad-range 23S rDNA real-time PCR assay for the detection and quantification of pathogenic bacteria in human whole blood and plasma specimens.

Authors:  Paolo Gaibani; Mara Mariconti; Gloria Bua; Sonia Bonora; Davide Sassera; Maria Paola Landini; Patrizia Mulatto; Stefano Novati; Claudio Bandi; Vittorio Sambri
Journal:  Biomed Res Int       Date:  2013-03-17       Impact factor: 3.411

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.