Literature DB >> 21813718

An international collaboration to standardize HIV-2 viral load assays: results from the 2009 ACHI(E)V(2E) quality control study.

F Damond1, A Benard, Claudia Balotta, Jürg Böni, Matthew Cotten, Vitor Duque, Bridget Ferns, Jeremy Garson, Perpetua Gomes, Fátima Gonçalves, Geoffrey Gottlieb, Bernd Kupfer, Jean Ruelle, Berta Rodes, Vicente Soriano, Mark Wainberg, Audrey Taieb, Sophie Matheron, Genevieve Chene, Francoise Brun-Vezinet.   

Abstract

Accurate HIV-2 plasma viral load quantification is crucial for adequate HIV-2 patient management and for the proper conduct of clinical trials and international cohort collaborations. This study compared the homogeneity of HIV-2 RNA quantification when using HIV-2 assays from ACHI(E)V(2E) study sites and either in-house PCR calibration standards or common viral load standards supplied to all collaborators. Each of the 12 participating laboratories quantified blinded HIV-2 samples, using its own HIV-2 viral load assay and standard as well as centrally validated and distributed common HIV-2 group A and B standards (http://www.hiv.lanl.gov/content/sequence/HelpDocs/subtypes-more.html). Aliquots of HIV-2 group A and B strains, each at 2 theoretical concentrations (2.7 and 3.7 log(10) copies/ml), were tested. Intralaboratory, interlaboratory, and overall variances of quantification results obtained with both standards were compared using F tests. For HIV-2 group A quantifications, overall and interlaboratory and/or intralaboratory variances were significantly lower when using the common standard than when using in-house standards at the concentration levels of 2.7 log(10) copies/ml and 3.7 log(10) copies/ml, respectively. For HIV-2 group B, a high heterogeneity was observed and the variances did not differ according to the type of standard used. In this international collaboration, the use of a common standard improved the homogeneity of HIV-2 group A RNA quantification only. The diversity of HIV-2 group B, particularly in PCR primer-binding regions, may explain the heterogeneity in quantification of this strain. Development of a validated HIV-2 viral load assay that accurately quantifies distinct circulating strains is needed.

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Year:  2011        PMID: 21813718      PMCID: PMC3187346          DOI: 10.1128/JCM.02389-10

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  32 in total

1.  Immunovirological response to triple nucleotide reverse-transcriptase inhibitors and ritonavir-boosted protease inhibitors in treatment-naive HIV-2-infected patients: The ACHIEV2E Collaboration Study Group.

Authors:  Antoine Benard; Ard van Sighem; Audrey Taieb; Emilia Valadas; Jean Ruelle; Vicente Soriano; Alexandra Calmy; Claudia Balotta; Florence Damond; Françoise Brun-Vezinet; Geneviève Chene; Sophie Matheron
Journal:  Clin Infect Dis       Date:  2011-05       Impact factor: 9.079

2.  Infection with retroviruses other than HIV-1 in Spain: a retrospective analysis for HIV-2, HTLV-I, and/or HTLV-II.

Authors:  Carlos Toro; Vincent Soriano; Concepción Tuset; Antonio Aguilera; Estrella Caballero; Raul Ortiz de Lejarazu; Berta Rodés
Journal:  HIV Clin Trials       Date:  2002 Sep-Oct

3.  HIV-2-associated AIDS and HIV-2 seroprevalence in Bissau, Guinea-Bissau.

Authors:  A Nauclér; P A Andreasson; C M Costa; R Thorstensson; G Biberfeld
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1989

4.  Human immunodeficiency virus type 2 (HIV-2) in Portugal: clinical spectrum, circulating subtypes, virus isolation, and plasma viral load.

Authors:  V Soriano; P Gomes; W Heneine; A Holguín; M Doruana; R Antunes; K Mansinho; W M Switzer; C Araujo; V Shanmugam; H Lourenço; J González-Lahoz; F Antunes
Journal:  J Med Virol       Date:  2000-05       Impact factor: 2.327

5.  Blinded, multicenter quality control study for the quantification of human immunodeficiency virus type 1 RNA in plasma by the Belgian AIDS reference laboratories.

Authors:  G Muyldermans; L Debaisieux; K Fransen; D Marissens; K Miller; D Vaira; A M Vandamme; A T Vandenbroucke; C Verhofstede; R Schuurman; G Zissis; S Lauwers
Journal:  Clin Microbiol Infect       Date:  2000-04       Impact factor: 8.067

6.  Genetic typing of HIV-2 from a Senegalese/German heterosexual transmission.

Authors:  F Gao; L Yue; P M Sharp; B H Hahn
Journal:  AIDS Res Hum Retroviruses       Date:  1993-07       Impact factor: 2.205

7.  Factors associated with clinical progression in HIV-2 infected-patients: the French ANRS cohort.

Authors:  Sophie Matheron; Sophie Pueyo; Florence Damond; François Simon; Annie Leprêtre; Pauline Campa; Roger Salamon; Genevieve Chêne; Françoise Brun-Vezinet
Journal:  AIDS       Date:  2003-12-05       Impact factor: 4.177

8.  Seroprevalence of HIV-1 and HIV-2 in Guinea Bissau in 1980.

Authors:  P N Fultz; W M Switzer; C A Schable; R C Desrosiers; D P Silva; J B McCormick
Journal:  AIDS       Date:  1988-04       Impact factor: 4.177

9.  The spread of human immunodeficiency virus type 2 into Europe: a geographical analysis.

Authors:  M Smallman-Raynor; A Cliff
Journal:  Int J Epidemiol       Date:  1991-06       Impact factor: 7.196

10.  Quantitative real-time PCR on Lightcycler for the detection of human immunodeficiency virus type 2 (HIV-2).

Authors:  Jean Ruelle; Benoît Kabamba Mukadi; Martin Schutten; Patrick Goubau
Journal:  J Virol Methods       Date:  2004-04       Impact factor: 2.014

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  10 in total

1.  A Multiplex PCR Approach for Detecting Dual Infections and Recombinants Involving Major HIV Variants.

Authors:  Pierre Cappy; Fabienne De Oliveira; Marie Gueudin; Elodie Alessandri-Gradt; Jean-Christophe Plantier
Journal:  J Clin Microbiol       Date:  2016-02-24       Impact factor: 5.948

2.  New sensitive one-step real-time duplex PCR method for group A and B HIV-2 RNA load.

Authors:  Véronique Avettand-Fenoel; Florence Damond; Marie Gueudin; Sophie Matheron; Adeline Mélard; Gilles Collin; Diane Descamps; Marie-Laure Chaix; Christine Rouzioux; Jean-Christophe Plantier
Journal:  J Clin Microbiol       Date:  2014-06-11       Impact factor: 5.948

3.  Assessment of the Cavidi ExaVir Load Assay for Monitoring Plasma Viral Load in HIV-2-Infected Patients.

Authors:  Pedro Borrego; Maria Fátima Gonçalves; Perpétua Gomes; Lavínia Araújo; Inês Moranguinho; Inês Brito Figueiredo; Isabel Barahona; José Rocha; Claudino Mendonça; Maria Cesarina Cruz; Jorge Barreto; Nuno Taveira
Journal:  J Clin Microbiol       Date:  2017-05-17       Impact factor: 5.948

4.  Validation for clinical use of a novel HIV-2 plasma RNA viral load assay using the Abbott m2000 platform.

Authors:  Ming Chang; Geoffrey S Gottlieb; Joan A Dragavon; Stephen L Cherne; Donna L Kenney; Stephen E Hawes; Robert A Smith; Nancy B Kiviat; Papa Salif Sow; Robert W Coombs
Journal:  J Clin Virol       Date:  2012-07-24       Impact factor: 3.168

5.  Characteristics of HIV-2 and HIV-1/HIV-2 Dually Seropositive Adults in West Africa Presenting for Care and Antiretroviral Therapy: The IeDEA-West Africa HIV-2 Cohort Study.

Authors:  Didier K Ekouevi; Eric Balestre; Patrick A Coffie; Daouda Minta; Eugene Messou; Adrien Sawadogo; Albert Minga; Papa Salif Sow; Emmanuel Bissagnene; Serge P Eholie; Geoffrey S Gottlieb; François Dabis; Djimon Marcel Zannou; Carin Ahouada; Jocelyn Akakpo; Christelle Ahomadegbé; Jules Bashi; Alice Gougounon-Houéto; Angèle Azon-Kouanou; Fabien Houngbé; Sikiratou Koumakpaï; Florence Alihonou; Marcelline d'Almeida; Irvine Hodonou; Ghislaine Hounhoui; Gracien Sagbo; Leïla Tossa-Bagnan; Herman Adjide; Joseph Drabo; René Bognounou; Arnaud Dienderé; Eliezer Traore; Lassane Zoungrana; Béatrice Zerbo; Adrien Bruno Sawadogo; Jacques Zoungrana; Arsène Héma; Ibrahim Soré; Guillaume Bado; Achille Tapsoba; Diarra Yé; Fla Kouéta; Sylvie Ouedraogo; Rasmata Ouédraogo; William Hiembo; Mady Gansonré; Eugène Messou; Joachim Charles Gnokoro; Mamadou Koné; Guillaume Martial Kouakou; Clarisse Amani Bosse; Kouakou Brou; Achi Isidore Assi; Henri Chenal; Denise Hawerlander; Franck Soppi; Albert Minga; Yao Abo; Germain Bomisso; Serge Paul Eholié; Mensah Deborah Noelly Amego; Viviane Andavi; Zelica Diallo; Frédéric Ello; Aristophane Koffi Tanon; Serge Olivier Koule; Koffi Charles Anzan; Calixte Guehi; Edmond Addi Aka; Koffi Ladji Issouf; Jean-Claude Kouakou; Marie-Sylvie N'gbeche; Pety Touré; Divine Avit-Edi; Kouadio Kouakou; Magloire Moh; Valérie Andoblé Yao; Madeleine Amorissani Folquet; Marie-Evelyne Dainguy; Cyrille Kouakou; Véronique Tanoh Méa-Assande; Gladys Oka-Berete; Nathalie Zobo; Patrick Acquah; Marie-Berthe Kokora; Tanoh François Eboua; Marguerite Timité-Konan; Lucrèce Diecket Ahoussou; Julie Kebé Assouan; Mabéa Flora Sami; Clémence Kouadio; Lorna Renner; Bamenla Goka; Jennifer Welbeck; Adziri Sackey; Seth Ntiri Owiafe; Christian Wejse; Zacarias José Da Silva; Joao Paulo; Amabelia Rodrigues; David da Silva; Candida Medina; Ines Oliviera-Souto; Lars Ostergaard; Alex Laursen; Morten Sodemann; Peter Aaby; Anders Fomsgaard; Christian Erikstrup; Jesper Eugen-Olsen; Moussa Y Maïga; Fatoumata Fofana Diakité; Abdoulaye Kalle; Drissa Katile; Hamar Alassane Traore; Daouda Minta; Tidiani Cissé; Mamadou Dembelé; Mohammed Doumbia; Mahamadou Fomba; Assétou Soukho Kaya; Abdoulaye M Traoré; Hamady Traoré; Amadou Abathina Toure; Fatoumata Dicko; Mariam Sylla; Alima Berthé; Hadizatou Coulibaly Traoré; Anta Koïta; Niaboula Koné; Clémentine N'diaye; Safiatou Touré Coulibaly; Mamadou Traoré; Naïchata Traoré; Man Charurat; Samuel Ajayi; Stephen Dapiap; Festus Igbinoba; Okwara Benson; Clément Adebamowo; Jesse James; Philip Osakede; John Olasode; Papa Salif Sow; Bernard Diop; Noël Magloire Manga; Judicael Malick Tine; Haby Signate Sy; Abou Ba; Aida Diagne; Hélène Dior; Malick Faye; Ramatoulaye Diagne Gueye; Aminata Diack Mbaye; Akessiwe Patassi; Awèrou Kotosso; Benjamin Goilibe Kariyare; Gafarou Gbadamassi; Agbo Komi; Kankoé Edem Mensah-Zukong; Pinuwe Pakpame; Annette Koko Lawson-Evi; Yawo Atakouma; Elom Takassi; Améyo Djeha; Ayoko Ephoévi-Gah; Sherifa El-Hadj Djibril; François Dabis; Emmanuel Bissagnene; Elise Arrivé; Patrick Coffie; Didier Ekouevi; Antoine Jaquet; Valériane Leroy; Charlotte Lewden; Annie Sasco; Jean-Claude Azani; Gérard Allou; Eric Balestre; Franck Bohossou; Sophie Karcher; Jules Mahan Gonsan; Jérôme Le Carrou; Séverin Lenaud; Célestin Nchot; Karen Malateste; Amon Roseamonde Yao; Bertine Siloué; Gwenaelle Clouet; Hugues Djetouan; Alexandra Doring; Adrienne Kouakou; Elodie Rabourdin; Jean Rivenc; Xavier Anglaret; Boubacar Ba; Jean Bosco Essanin; Andrea Ciaranello; Sébastien Datté; Sophie Desmonde; Jean-Serge Elvis Diby; Geoffrey S Gottlieb; Apollinaire Gninlgninrin Horo; Serge N'zoré Kangah; Denis Malvy; David Meless; Aida Mounkaila-Harouna; Camille Ndondoki; Caroline Shiboski; Rodolphe Thiébaut
Journal:  PLoS One       Date:  2013-06-18       Impact factor: 3.240

6.  Plasma HIV-2 RNA According to CD4 Count Strata among HIV-2-Infected Adults in the IeDEA West Africa Collaboration.

Authors:  Didier K Ekouévi; Véronique Avettand-Fènoël; Boris K Tchounga; Patrick A Coffie; Adrien Sawadogo; Daouda Minta; Albert Minga; Serge P Eholie; Jean-Christophe Plantier; Florence Damond; François Dabis; Christine Rouzioux
Journal:  PLoS One       Date:  2015-06-25       Impact factor: 3.240

7.  Discrepant amplification results during the development of an assay leads to reclassification of two AIDS reagent repository HIV-2 isolates as HIV-1.

Authors:  Linda L Jagodzinski; Ying Liu; Holly R Hack; Catherine Kibirige; Sheila A Peel; Mark M Manak
Journal:  PLoS One       Date:  2014-05-05       Impact factor: 3.240

8.  [HIV-2 infection in Senegal: virological failures and resistance to antiretroviral drugs (ARVs)].

Authors:  Selly Ba; Ndeye Mery Dia-Badiane; Stephen Edward Hawes; Louise Fortes Deguenonvo; Fatima Sall; Cheikh Tidiane Ndour; Khadim Faye; Fatou Traoré; Macoumba Touré; Marie Pierre Sy; Dana Noelle Raugi; Nancy Berenice Kiviat; Robert Alexander Smith; Moussa Seydi; Papa Salif Sow; Geoffrey Scott Gottlieb
Journal:  Pan Afr Med J       Date:  2019-07-18

9.  Treatment outcomes and characteristics of HIV-2 patients compared to HIV-1 patients on an NNRTI-based first line art at the adult infectious diseases centre of the University Teaching Hospital (UTH) in Lusaka.

Authors:  Anita Thandiwe Bhebhe; Gershom Chongwe; Given Moonga
Journal:  Pan Afr Med J       Date:  2021-12-16

10.  Importance of an Early HIV Antibody Differentiation Immunoassay for Detection of Dual Infection with HIV-1 and HIV-2.

Authors:  Andrea Zbinden; Roland Dürig; Cyril Shah; Jürg Böni; Jörg Schüpbach
Journal:  PLoS One       Date:  2016-06-16       Impact factor: 3.240

  10 in total

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