Literature DB >> 21812096

No evidence that extended tracts of homozygosity are associated with Alzheimer's disease.

Rebecca Sims1, Sarah Dwyer, Denise Harold, Amy Gerrish, Paul Hollingworth, Jade Chapman, Nicola Jones, Richard Abraham, Dobril Ivanov, Jaspreet Singh Pahwa, Valentina Moskvina, Kimberley Dowzell, Charlene Thomas, Alexandra Stretton, Simon Lovestone, John Powell, Petroula Proitsi, Michelle K Lupton, Carol Brayne, David C Rubinsztein, Michael Gill, Brian Lawlor, Aoibhinn Lynch, Kevin Morgan, Kristelle S Brown, Peter A Passmore, David Craig, Bernadette McGuiness, Stephen Todd, Janet A Johnston, Clive Holmes, David Mann, A David Smith, Seth Love, Patrick G Kehoe, John Hardy, Simon Mead, Nick Fox, Martin Rossor, John Collinge, Gill Livingston, Nicholas J Bass, Hugh Gurling, Andrew McQuillin, Lesley Jones, Peter A Holmans, Michael O'Donovan, Michael J Owen, Julie Williams.   

Abstract

We sought to investigate the contribution of extended runs of homozygosity in a genome-wide association dataset of 1,955 Alzheimer's disease cases and 955 elderly screened controls genotyped for 529,205 autosomal single nucleotide polymorphisms. Tracts of homozygosity may mark regions inherited from a common ancestor and could reflect disease loci if observed more frequently in cases than controls. We found no excess of homozygous tracts in Alzheimer's disease cases compared to controls and no individual run of homozygosity showed association to Alzheimer's disease.
Copyright © 2011 Wiley-Liss, Inc.

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Year:  2011        PMID: 21812096     DOI: 10.1002/ajmg.b.31216

Source DB:  PubMed          Journal:  Am J Med Genet B Neuropsychiatr Genet        ISSN: 1552-4841            Impact factor:   3.568


  13 in total

1.  Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk.

Authors:  David C Samuels; Jing Wang; Fei Ye; Jing He; Rebecca T Levinson; Quanhu Sheng; Shilin Zhao; John A Capra; Yu Shyr; Wei Zheng; Yan Guo
Journal:  Genetics       Date:  2016-08-31       Impact factor: 4.562

Review 2.  Alternative Applications of Genotyping Array Data Using Multivariant Methods.

Authors:  David C Samuels; Jennifer E Below; Scott Ness; Hui Yu; Shuguang Leng; Yan Guo
Journal:  Trends Genet       Date:  2020-08-06       Impact factor: 11.639

3.  Evidence of recessive Alzheimer disease loci in a Caribbean Hispanic data set: genome-wide survey of runs of homozygosity.

Authors:  Mahdi Ghani; Christine Sato; Joseph H Lee; Christiane Reitz; Danielle Moreno; Richard Mayeux; Peter St George-Hyslop; Ekaterina Rogaeva
Journal:  JAMA Neurol       Date:  2013-10       Impact factor: 18.302

4.  Common polygenic variation enhances risk prediction for Alzheimer's disease.

Authors:  Valentina Escott-Price; Rebecca Sims; Christian Bannister; Denise Harold; Maria Vronskaya; Elisa Majounie; Nandini Badarinarayan; Kevin Morgan; Peter Passmore; Clive Holmes; John Powell; Carol Brayne; Michael Gill; Simon Mead; Alison Goate; Carlos Cruchaga; Jean-Charles Lambert; Cornelia van Duijn; Wolfgang Maier; Alfredo Ramirez; Peter Holmans; Lesley Jones; John Hardy; Sudha Seshadri; Gerard D Schellenberg; Philippe Amouyel; Julie Williams
Journal:  Brain       Date:  2015-10-21       Impact factor: 13.501

5.  Cooperative genome-wide analysis shows increased homozygosity in early onset Parkinson's disease.

Authors:  Javier Simón-Sánchez; Laura L Kilarski; Michael A Nalls; Maria Martinez; Claudia Schulte; Peter Holmans; Thomas Gasser; John Hardy; Andrew B Singleton; Nicholas W Wood; Alexis Brice; Peter Heutink; Nigel Williams; Huw R Morris
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240

6.  No Reliable Association between Runs of Homozygosity and Schizophrenia in a Well-Powered Replication Study.

Authors:  Emma C Johnson; Douglas W Bjelland; Daniel P Howrigan; Abdel Abdellaoui; Gerome Breen; Anders Borglum; Sven Cichon; Franziska Degenhardt; Andreas J Forstner; Josef Frank; Giulio Genovese; Stefanie Heilmann-Heimbach; Stefan Herms; Per Hoffman; Wolfgang Maier; Manuel Mattheisen; Derek Morris; Bryan Mowry; Betram Müller-Mhysok; Benjamin Neale; Igor Nenadic; Markus M Nöthen; Colm O'Dushlaine; Marcella Rietschel; Douglas M Ruderfer; Dan Rujescu; Thomas G Schulze; Matthew A Simonson; Eli Stahl; Jana Strohmaier; Stephanie H Witt; Patrick F Sullivan; Matthew C Keller
Journal:  PLoS Genet       Date:  2016-10-28       Impact factor: 5.917

7.  Recent Consanguinity and Outbred Autozygosity Are Associated With Increased Risk of Late-Onset Alzheimer's Disease.

Authors:  Valerio Napolioni; Marzia A Scelsi; Raiyan R Khan; Andre Altmann; Michael D Greicius
Journal:  Front Genet       Date:  2021-01-29       Impact factor: 4.599

8.  Association of Long Runs of Homozygosity With Alzheimer Disease Among African American Individuals.

Authors:  Mahdi Ghani; Christiane Reitz; Rong Cheng; Badri Narayan Vardarajan; Gyungah Jun; Christine Sato; Adam Naj; Ruchita Rajbhandary; Li-San Wang; Otto Valladares; Chiao-Feng Lin; Eric B Larson; Neill R Graff-Radford; Denis Evans; Philip L De Jager; Paul K Crane; Joseph D Buxbaum; Jill R Murrell; Towfique Raj; Nilufer Ertekin-Taner; Mark Logue; Clinton T Baldwin; Robert C Green; Lisa L Barnes; Laura B Cantwell; M Daniele Fallin; Rodney C P Go; Patrick A Griffith; Thomas O Obisesan; Jennifer J Manly; Kathryn L Lunetta; M Ilyas Kamboh; Oscar L Lopez; David A Bennett; Hugh Hendrie; Kathleen S Hall; Alison M Goate; Goldie S Byrd; Walter A Kukull; Tatiana M Foroud; Jonathan L Haines; Lindsay A Farrer; Margaret A Pericak-Vance; Joseph H Lee; Gerard D Schellenberg; Peter St George-Hyslop; Richard Mayeux; Ekaterina Rogaeva
Journal:  JAMA Neurol       Date:  2015-11       Impact factor: 18.302

9.  Exome sequencing in a consanguineous family clinically diagnosed with early-onset Alzheimer's disease identifies a homozygous CTSF mutation.

Authors:  Jose Bras; Ruth Djaldetti; Ana Margarida Alves; Simon Mead; Lee Darwent; Alberto Lleo; Jose Luis Molinuevo; Rafael Blesa; Andrew Singleton; John Hardy; Jordi Clarimon; Rita Guerreiro
Journal:  Neurobiol Aging       Date:  2016-07-04       Impact factor: 4.673

10.  Inbreeding among Caribbean Hispanics from the Dominican Republic and its effects on risk of Alzheimer disease.

Authors:  Badri N Vardarajan; Daniel J Schaid; Christiane Reitz; Rafael Lantigua; Martin Medrano; Ivonne Z Jiménez-Velázquez; Joseph H Lee; Mahdi Ghani; Ekaterina Rogaeva; Peter St George-Hyslop; Richard P Mayeux
Journal:  Genet Med       Date:  2014-11-13       Impact factor: 8.822

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