| Literature DB >> 21811641 |
Gisela Bretzel1, Kristina Lydia Huber, Basil Kobara, Marcus Beissner, Ebekalisai Piten, Karl-Heinz Herbinger, Franz Xaver Wiedemann, Komi Amekuse, Abiba Banla Kere, Kerstin Helfrich, Erna Fleischmann, Thomas Löscher, Adolf Diefenhardt, Jörg Nitschke.
Abstract
BACKGROUND: Since the early 1990s more than 1,800 patients with lesions suspicious for Buruli ulcer disease (BUD) have been reported from Togo. However, less than five percent of these were laboratory confirmed. Since 2007, the Togolese National Buruli Ulcer Control Program has been supported by the German Leprosy and Tuberculosis Relief Association (DAHW). Collaboration with the Department for Infectious Diseases and Tropical Medicine (DITM), University Hospital, Munich, Germany, allowed IS2404 PCR analysis of diagnostic samples from patients with suspected BUD during a study period of three years. METHODOLOGY/PRINCIPALEntities:
Mesh:
Year: 2011 PMID: 21811641 PMCID: PMC3139659 DOI: 10.1371/journal.pntd.0001228
Source DB: PubMed Journal: PLoS Negl Trop Dis ISSN: 1935-2727
Case confirmation rates.
| Type of lesion | Study site | Suspected cases | MIC | PCR | ||||
| Confirmed cases [N] | Suspected cases subjected to MIC [N] | Case confirmation rate (%) | Confirmed cases [N] | Suspected cases subjected to PCR [N] | Case confirmation rate (%) | |||
|
| Tsévié | 49 | 9 | 23 | (39.1) | 38 | 49 | (77,6) |
| Sotouboua | 2 | NA | NA | NA | 0 | 2 | (0.0) | |
| Agbetiko | 0 | NA | NA | NA | NA | NA | NA | |
| Total | 51 | 9 | 23 | (39.1) | 38 | 51 | (74.5) | |
|
| Tsévié | 138 | 34 | 120 | (28.3) | 71 | 138 | (51.4) |
| Sotouboua | 12 | 0 | 1 | (0.0) | 0 | 12 | (0.0) | |
| Agbetiko | 1 | NA | NA | NA | 0 | 1 | (0.0) | |
| Total | 151 | 34 | 121 | (28.1) | 71 | 151 | (47.0) | |
|
| 202 | 43 | 144 | (29.9) | 109 | 202 | (54.0) |
Table 1 describes the case confirmation rates, i.e. the number of laboratory confirmed BUD cases divided by the total number of patients with suspected BUD (suspected cases) of whom samples were subjected to a certain diagnostic test; diagnostic samples from 202 suspected BUD cases (suspected cases) from three study sites in Togo (CHR Tsévié, CHP Sotouboua, USP Agbetiko) were collected within three years (September 2007 through August 2010);
Non-ulcerative lesions: FNA (fine needle aspiration) samples, punch biopsy samples and surgical biopsy samples were analyzed; ulcerative lesions: swab samples, FNA (fine needle aspiration) samples, punch biopsy samples and surgical biopsy samples were analyzed;
Test: MIC, microscopic examination for the detection of acid fast bacilli; swab samples and FNA samples were analyzed;
Test: PCR, polymerase chain reaction, gel-based IS2404 PCR; swab samples, FNA samples, punch biopsy samples and surgical biopsy samples were analyzed;
NA, not available;
Diagnostic specimens and transport media.
| Type of Treatment | Type of lesion | Diagnostic test | Transport medium | Swab | FNA | Punch biopsy | Surgical biopsy |
|
| Non-ulcerative | MIC | NA | NA | yes | NA | NA |
| PCR | CLS | NA | yes | yes | yes | ||
| Ulcerative | MIC | NA | yes | yes | NA | NA | |
| PCR | CLS | yes | yes | yes | yes | ||
|
| Non-ulcerative | MIC | NA | NA | yes | NA | NA |
| PCR | CLS | NA | yes | yes | NA | ||
| Ulcerative | MIC | NA | yes | yes | NA | NA | |
| PCR | CLS | yes | yes | yes | NA |
Table 2 describes diagnostic specimens and transport media according to diagnostic tests, type of lesion and type of treatment.
FNA, fine needle aspiration;
MIC, microscopic examination for the detection of acid fast bacilli;
NA, not applicable;
PCR, IS2404 gel-based polymerase chain reaction;
CLS, cell lysis solution (Qiagen, Germany).
Positivity rates.
| Number of positive samples/total number of samples tested [N(%)] | |||||||||
| Type of lesion | Study site | Swab | FNA | Punch biopsy | Surgical biopsy | ||||
| MIC [N(%)] | PCR [N(%)] | MIC [N(%)] | PCR [N(%)] | MIC [N(%)] | PCR [N(%)] | MIC [N(%)] | PCR [N(%)] | ||
|
| Tsévié | ND | ND | 9/23 (39.1) | 27/49 (55.1) | NA | 32/50 (64.0) | NA | 2/3 (66.7) |
| Sotouboua | ND | ND | NA | 0/1 (0) | NA | NA | NA | 0/2 (0) | |
| Agbetiko | ND | ND | NA | NA | NA | NA | NA | NA | |
| Total | ND | ND | 9/23 (39.1) | 27/50 (54.0) | NA | 32/50 (64.0) | NA | 2/5 (40.0) | |
|
| Tsévié | 27/115 (23.5) | 63/142 (44.4) | 31/92 (33.7) | 45/111 (40.5) | NA | 49/121 (40.5) | NA | 12/44 (27.3) |
| Sotouboua | 0/1 (0.0) | 0/9 (0.0) | NA | 0/5 (0.0) | NA | 0/6 (0.0) | NA | 0/2 (0.0) | |
| Agbetiko | NA | 0/1 (0.0) | NA | 0/1 (0.0) | NA | 0/2 (0.0) | NA | NA | |
| Total | 27/116 (23.3) | 63/152 (41.5) | 31/92 (33.7) | 45/117 (38.5) | NA | 49/129 (38.0) | NA | 12/46 (26.1) | |
|
| 27/116 (23.3) | 63/152 (41.5) | 40/115 (34.8) | 72/167 (43.1) | NA | 81/179 (45.3) | NA | 14/51 (27.5) | |
Table 3 describes the positivity rates, i.e. the number of positive samples divided by the total number of samples tested, of microscopy and IS2404 gel-based polymerase chain reaction per type of lesion and type of sample; diagnostic samples from 202 patients with suspected BUD from three study sites in Togo (CHR Tsévié, CHP Sotouboua, USP Agbetiko) were collected within three years (September 2007 through August 2010);
FNA, fine needle aspiration;
MIC, microscopic examination for the detection of acid fast bacilli;
PCR, IS2404, gel-based polymerase chain reaction;
ND, not done;
NA, not available;
Figure 1Age distribution of 109 laboratory-confirmed BUD patients.
For all patients the age was known and 65 (59.6%) of them were in age group 5–14 years. The age range was 2–60 years with a mean of 17.3 years and the median was 12 years.
Figure 2Case confirmation rate per observation period.
The PCR case confirmation rate was 36/84 (42.86%) in the first observation period (September 2007–August 2008), 37/66 (56.06%) in the second observation period (September 2008–August 2009) and 36/52 (69.23%) in the third observation period (September 2009–August 2010). The case confirmation rate increased during the three observation periods with a definite trend (coefficient of determination, R2 = 1).