Literature DB >> 21806830

Validation and validity of verbal autopsy procedures.

Daniel Chandramohan1.   

Abstract

Entities:  

Year:  2011        PMID: 21806830      PMCID: PMC3160915          DOI: 10.1186/1478-7954-9-22

Source DB:  PubMed          Journal:  Popul Health Metr        ISSN: 1478-7954


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Commentary

Methods for interpreting verbal autopsy (VA) that have been validated fall into two major categories: (1) physician-certified verbal autopsy (PCVA), the commonly-used method in which one or more physicians ascertain causes of death based on their clinical judgment; and (2) computerized coding of verbal autopsy (CCVA), in which causes of death are derived using predefined criteria. Decision rules for CCVA can be expert opinion-based or data driven. The accuracy of these VA interpretation methods varies depending on causes of death per se, while the effect of misclassification error in VA on the estimates of cause-specific mortality fractions (CSMF) depends on the distribution of causes of death. The importance of acknowledging the effects of misclassification of causes of death by VA has been highlighted by the recent controversial estimates of malaria mortality in India [1]. The parameters of validity of VA obtained from a validation study may be useful to measure the uncertainty limits of CSMFs due to misclassification errors of VA, and in some contexts, to adjust the estimate of CSMF for the effect of misclassification error [2,3]. The gold standard diagnosis of cause of death (COD) for assessing the validity of VA has been the COD derived from hospital medical records. The main limitations of using hospital-based CODs as the gold standard are: (1) The accuracy of medical records-based COD is debatable, even though some studies have refined the diagnosis with expert review of hospital records; and (2) the composition and distribution of hospital CODs may not be representative of deaths occurring in the community. In addition, if diagnostic algorithms for CCVA are developed from subsets of validation study datasets, their external validity may be compromised. Nevertheless, hospital diagnosis of COD based on defined clinical and laboratory criteria are the only useful gold standard available at present for validating VAs. The validity of InterVA has not previously been tested against a gold standard diagnosis. The reliability of InterVA has been determined by examining the concordance of CSMFs estimated by InterVA and PCVA. Given that the accuracy of PCVA is questionable, estimating concordance between causes of death derived by PCVA and InterVA as a measure of validity needs to be interpreted with caution. Measures used to assess the validity of VA include sensitivity, specificity, positive predictive value, and absolute (absolute error) or relative (relative error) difference between CSMF estimated by VA and true CSMF in the validation data. Sensitivity and specificity that measure accuracy at the individual level vary substantially between causes of death across different VA interpretation methods. The absolute and relative errors of CSMF measure the accuracy of VA at the population level. The variability of the absolute error in CSMF appears to be reasonable for most CODs because often the number of false positive and false negative diagnoses balance out. However, the relative error in CSMF tends to be exaggerated, especially if the CSMF is low. Murray and colleagues in this series recommend determining the validity of VAs using cause-specific and average chance-corrected concordance across causes for single cause assignment methods, as well as for one to k causes across causes for individual multiple cause assignment methods [4]. For estimation of CSMFs, they recommend CSMF accuracy and cause-specific concordance correlation coefficients of estimated CSMFs compared to true CSMFs. These measures are useful to compare the performance of different VA interpretation methods and could also be used to estimate the uncertainty limits of CSMF estimates attributable to misclassification errors of VA. Methods to estimate uncertainty limits for CSMFs attributable to misclassification errors of VA need to be further developed. Flaxman et al [5] have developed and validated a new CCVA, the Random Forest (RF) Method, for interpreting VA in a large multicountry validation dataset. The median chance corrected concordance rate of the RF Method is higher than PCVA for adult, child, and neonatal VAs. These are very promising results and if confirmed in other validation datasets, software for coding VAs based on the RF Method would greatly improve the reliability and timeliness of CSMFs collected using VAs. What is urgently required is an objective assessment of the performance of the RF Method versus InterVA, based on this high-standard VA validation study dataset, and then to actively promote and facilitate the implementation of the best-performing method in all mortality surveillance systems using VAs. This would likely greatly improve the quality and comparability of cause-specific mortality data obtained using VAs.
  5 in total

1.  Malaria-attributed death rates in India.

Authors:  Neena Valecha; Sarah Staedke; Scott Filler; Arthur Mpimbaza; Brian Greenwood; Daniel Chandramohan
Journal:  Lancet       Date:  2011-03-19       Impact factor: 79.321

2.  Cause-of-death ascertainment for deaths that occur outside hospitals in Thailand: application of verbal autopsy methods.

Authors:  Warangkana Polprasert; Chalapati Rao; Timothy Adair; Junya Pattaraarchachai; Yawarat Porapakkham; Alan D Lopez
Journal:  Popul Health Metr       Date:  2010-05-18

Review 3.  Measurement of trends in childhood malaria mortality in Africa: an assessment of progress toward targets based on verbal autopsy.

Authors:  Eline L Korenromp; Brian G Williams; Eleanor Gouws; Christopher Dye; Robert W Snow
Journal:  Lancet Infect Dis       Date:  2003-06       Impact factor: 25.071

4.  Random forests for verbal autopsy analysis: multisite validation study using clinical diagnostic gold standards.

Authors:  Abraham D Flaxman; Alireza Vahdatpour; Sean Green; Spencer L James; Christopher Jl Murray
Journal:  Popul Health Metr       Date:  2011-08-04

5.  Robust metrics for assessing the performance of different verbal autopsy cause assignment methods in validation studies.

Authors:  Christopher Jl Murray; Rafael Lozano; Abraham D Flaxman; Alireza Vahdatpour; Alan D Lopez
Journal:  Popul Health Metr       Date:  2011-08-04
  5 in total
  4 in total

1.  Measuring mortality due to HIV-associated tuberculosis among adults in South Africa: Comparing verbal autopsy, minimally-invasive autopsy, and research data.

Authors:  Aaron S Karat; Mpho Tlali; Katherine L Fielding; Salome Charalambous; Violet N Chihota; Gavin J Churchyard; Yasmeen Hanifa; Suzanne Johnson; Kerrigan McCarthy; Neil A Martinson; Tanvier Omar; Kathleen Kahn; Daniel Chandramohan; Alison D Grant
Journal:  PLoS One       Date:  2017-03-23       Impact factor: 3.240

2.  Revising the WHO verbal autopsy instrument to facilitate routine cause-of-death monitoring.

Authors:  Jordana Leitao; Daniel Chandramohan; Peter Byass; Robert Jakob; Kanitta Bundhamcharoen; Chanpen Choprapawon; Don de Savigny; Edward Fottrell; Elizabeth França; Frederik Frøen; Gihan Gewaifel; Abraham Hodgson; Sennen Hounton; Kathleen Kahn; Anand Krishnan; Vishwajeet Kumar; Honorati Masanja; Erin Nichols; Francis Notzon; Mohammad Hafiz Rasooly; Osman Sankoh; Paul Spiegel; Carla AbouZahr; Marc Amexo; Derege Kebede; William Soumbey Alley; Fatima Marinho; Mohamed Ali; Enrique Loyola; Jyotsna Chikersal; Jun Gao; Giuseppe Annunziata; Rajiv Bahl; Kidist Bartolomeus; Ties Boerma; Bedirhan Ustun; Doris Chou; Lulu Muhe; Matthews Mathai
Journal:  Glob Health Action       Date:  2013-09-13       Impact factor: 2.640

3.  Naive Bayes classifiers for verbal autopsies: comparison to physician-based classification for 21,000 child and adult deaths.

Authors:  Pierre Miasnikof; Vasily Giannakeas; Mireille Gomes; Lukasz Aleksandrowicz; Alexander Y Shestopaloff; Dewan Alam; Stephen Tollman; Akram Samarikhalaj; Prabhat Jha
Journal:  BMC Med       Date:  2015-11-25       Impact factor: 8.775

4.  Validation of verbal autopsy methods using hospital medical records: a case study in Vietnam.

Authors:  Hong Thi Tran; Hoa Phuong Nguyen; Sue M Walker; Peter S Hill; Chalapati Rao
Journal:  BMC Med Res Methodol       Date:  2018-05-18       Impact factor: 4.615

  4 in total

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