Literature DB >> 21805261

Manipulation of gene function in Xenopus laevis.

Mizuho S Mimoto1, Jan L Christian.   

Abstract

Xenopus laevis embryos are particularly well suited to address questions requiring either knockdown or overexpression of genes in a tissue-specific fashion during vertebrate embryonic development. These manipulations are achieved by targeted injection of either antisense morpholino oligonucleotides or synthetic mRNAs, respectively, into the early embryo. Herein we offer detailed protocols describing how to design and perform these experiments successfully, as well as a brief discussion of considerations for performing a microarray analysis in this organism.

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Year:  2011        PMID: 21805261      PMCID: PMC3911881          DOI: 10.1007/978-1-61779-210-6_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

Review 1.  Morpholino oligos: making sense of antisense?

Authors:  Janet Heasman
Journal:  Dev Biol       Date:  2002-03-15       Impact factor: 3.582

2.  Assays for gene function in developing Xenopus embryos.

Authors:  P D Vize; D A Melton; A Hemmati-Brivanlou; R M Harland
Journal:  Methods Cell Biol       Date:  1991       Impact factor: 1.441

3.  Analysis of class II gene regulation.

Authors:  T D Sargent; P H Mathers
Journal:  Methods Cell Biol       Date:  1991       Impact factor: 1.441

4.  Fates of the blastomeres of the 16-cell stage Xenopus embryo.

Authors:  S A Moody
Journal:  Dev Biol       Date:  1987-02       Impact factor: 3.582

5.  Fates of the blastomeres of the 32-cell-stage Xenopus embryo.

Authors:  S A Moody
Journal:  Dev Biol       Date:  1987-08       Impact factor: 3.582

Review 6.  Resources and transgenesis techniques for functional genomics in Xenopus.

Authors:  Hajime Ogino; Haruki Ochi
Journal:  Dev Growth Differ       Date:  2009-05       Impact factor: 2.053

7.  Axis determination in eggs of Xenopus laevis: a critical period before first cleavage, identified by the common effects of cold, pressure and ultraviolet irradiation.

Authors:  S R Scharf; J C Gerhart
Journal:  Dev Biol       Date:  1983-09       Impact factor: 3.582

8.  Expression of the poly(A)-binding protein during development of Xenopus laevis.

Authors:  B D Zelus; D H Giebelhaus; D W Eib; K A Kenner; R T Moon
Journal:  Mol Cell Biol       Date:  1989-06       Impact factor: 4.272

9.  Bone morphogenetic protein 4: a ventralizing factor in early Xenopus development.

Authors:  L Dale; G Howes; B M Price; J C Smith
Journal:  Development       Date:  1992-06       Impact factor: 6.868

10.  Fate map for the 32-cell stage of Xenopus laevis.

Authors:  L Dale; J M Slack
Journal:  Development       Date:  1987-04       Impact factor: 6.868

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  11 in total

1.  Centriole biogenesis and function in multiciliated cells.

Authors:  Siwei Zhang; Brian J Mitchell
Journal:  Methods Cell Biol       Date:  2015-05-27       Impact factor: 1.441

2.  The prodomain of BMP4 is necessary and sufficient to generate stable BMP4/7 heterodimers with enhanced bioactivity in vivo.

Authors:  Judith M Neugebauer; Sunjong Kwon; Hyung-Seok Kim; Nathan Donley; Anup Tilak; Shailaja Sopory; Jan L Christian
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

3.  Neural Explant Cultures from Xenopus laevis.

Authors:  Laura Anne Lowery; Anna E R Faris; Alina Stout; David Van Vactor
Journal:  J Vis Exp       Date:  2012-10-15       Impact factor: 1.355

4.  Using Xenopus skin to study cilia development and function.

Authors:  Michael E Werner; Brian J Mitchell
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

5.  Tril dampens Nodal signaling through Pellino2- and Traf6-mediated activation of Nedd4l.

Authors:  Hyung-Seok Kim; Yangsook Song Green; Yuanyuan Xie; Jan L Christian
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-07       Impact factor: 11.205

6.  Cerebroventricular microinjection (CVMI) into adult zebrafish brain is an efficient misexpression method for forebrain ventricular cells.

Authors:  Caghan Kizil; Michael Brand
Journal:  PLoS One       Date:  2011-11-04       Impact factor: 3.240

7.  Comparative genomic analysis of slc39a12/ZIP12: insight into a zinc transporter required for vertebrate nervous system development.

Authors:  Winyoo Chowanadisai
Journal:  PLoS One       Date:  2014-11-06       Impact factor: 3.240

8.  Fibronectin type III and intracellular domains of Toll-like receptor 4 interactor with leucine-rich repeats (Tril) are required for developmental signaling.

Authors:  Hyung-Seok Kim; Autumn McKnite; Yuanyuan Xie; Jan L Christian
Journal:  Mol Biol Cell       Date:  2018-01-03       Impact factor: 4.138

9.  Physiological effects of KDM5C on neural crest migration and eye formation during vertebrate development.

Authors:  Youni Kim; Youngeun Jeong; Kujin Kwon; Tayaba Ismail; Hyun-Kyung Lee; Chowon Kim; Jeen-Woo Park; Oh-Shin Kwon; Beom-Sik Kang; Dong-Seok Lee; Tae Joo Park; Taejoon Kwon; Hyun-Shik Lee
Journal:  Epigenetics Chromatin       Date:  2018-12-06       Impact factor: 4.954

10.  Analysis of Transforming Growth Factor ß Family Cleavage Products Secreted Into the Blastocoele of Xenopus laevis Embryos.

Authors:  Hyung-Seok Kim; Jan L Christian
Journal:  J Vis Exp       Date:  2021-07-21       Impact factor: 1.355

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