Literature DB >> 21804785

LexRDF Model: An RDF-based Unified Model for Heterogeneous Biomedical Ontologies.

Cui Tao1, Jyotishman Pathak, Harold R Solbrig, Wei-Qi Wei, Christopher G Chute.   

Abstract

The Lexical Grid (LexGrid) project is an on-going community-driven initiative coordinated by the Mayo Clinic Division of Biomedical Statistics and Informatics (BSI). It provides a common terminology model to represent multiple vocabulary and ontology sources as well as a scalable and robust API for accessing such information. While successfully used and adopted in the biomedical and clinical community, an important requirement is to align the existing LexGrid model with emerging Semantic Web standards and specifications. This paper introduces the LexRDF model, which maps the LexGrid model elements to corresponding constructs in W3C specifications such as RDF, OWL, and SKOS. Our mapping specification successfully used W3C standards to represent most of the existing LexGrid components, and those that did not map point out issues in the existing specifications that the W3C may want to consider in future work. With LexRDF, the terminological information represented in LexGrid can be translated to RDF triples, and therefore allowing LexGrid to leverage standard tools and technologies such as SPARQL and RDF triple stores.

Entities:  

Year:  2009        PMID: 21804785      PMCID: PMC3146261     

Source DB:  PubMed          Journal:  CEUR Workshop Proc        ISSN: 1613-0073


  4 in total

1.  Clinical classification and terminology: some history and current observations.

Authors:  C G Chute
Journal:  J Am Med Inform Assoc       Date:  2000 May-Jun       Impact factor: 4.497

2.  Biomedical ontologies in action: role in knowledge management, data integration and decision support.

Authors:  O Bodenreider
Journal:  Yearb Med Inform       Date:  2008

3.  LexGrid: a framework for representing, storing, and querying biomedical terminologies from simple to sublime.

Authors:  Jyotishman Pathak; Harold R Solbrig; James D Buntrock; Thomas M Johnson; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

Review 4.  The Copernican era of healthcare terminology: a re-centering of health information systems.

Authors:  C G Chute
Journal:  Proc AMIA Symp       Date:  1998
  4 in total

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