Literature DB >> 21801767

Exploring the 5'-UTR DNA region as a target for optimizing recombinant gene expression from the strong and inducible Pm promoter in Escherichia coli.

Laila Berg1, Veronika Kucharova, Ingrid Bakke, Svein Valla, Trygve Brautaset.   

Abstract

By using the strong and inducible Pm promoter as a model, we recently reported that the β-lactamase production (encoded by bla) can be stimulated up to 20-fold in Escherichia coli by mutating the DNA region corresponding to the 5'-untranslated region of mRNA (UTR). One striking observation was the unexpected large stimulatory effect some of these UTR variants had on the bla transcript production level. We here demonstrate that such UTR variants can also be used to improve the expression level of the alternative genes celB (encoding phosphoglucomutase) and inf-α2b (encoding human cytokine interferon α2b), which both can be expressed to high levels even with the wild-type Pm UTR DNA sequence. Our data indicated some degree of context dependency between the UTR DNA and concomitant recombinant gene sequences. By constructing and using a synthetic operon, we demonstrated that UTR variants optimized for high-level expression of probably any recombinant gene can be efficiently selected from large UTR mutant libraries. The stimulation affected both the transcript production and translational level, and such modified UTR sequences therefore clearly have a significant applied potential for improvement of recombinant gene expression processes.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21801767     DOI: 10.1016/j.jbiotec.2011.07.012

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  10 in total

1.  Design and optimization of short DNA sequences that can be used as 5' fusion partners for high-level expression of heterologous genes in Escherichia coli.

Authors:  Veronika Kucharova; Jørgen Skancke; Trygve Brautaset; Svein Valla
Journal:  Appl Environ Microbiol       Date:  2013-08-23       Impact factor: 4.792

2.  Novel Translation Initiation Regulation Mechanism in Escherichia coli ptrB Mediated by a 5'-Terminal AUG.

Authors:  Heather J Beck; Gary R Janssen
Journal:  J Bacteriol       Date:  2017-06-27       Impact factor: 3.490

Review 3.  The XylS/Pm regulator/promoter system and its use in fundamental studies of bacterial gene expression, recombinant protein production and metabolic engineering.

Authors:  Agnieszka Gawin; Svein Valla; Trygve Brautaset
Journal:  Microb Biotechnol       Date:  2017-03-09       Impact factor: 5.813

4.  Signal amplification of araC pBAD using a standardized translation initiation region.

Authors:  Patrick J Shilling; Diana Khananisho; Alister J Cumming; Bill Söderström; Daniel O Daley
Journal:  Synth Biol (Oxf)       Date:  2022-07-05

5.  Non-Invasive Analysis of Recombinant mRNA Stability in Escherichia coli by a Combination of Transcriptional Inducer Wash-Out and qRT-PCR.

Authors:  Veronika Kucharova; Trine Aakvik Strand; Eivind Almaas; Adrian E Naas; Trygve Brautaset; Svein Valla
Journal:  PLoS One       Date:  2013-06-19       Impact factor: 3.240

6.  Combinatorial mutagenesis and selection to understand and improve yeast promoters.

Authors:  Laila Berg; Trine Aakvik Strand; Svein Valla; Trygve Brautaset
Journal:  Biomed Res Int       Date:  2013-06-06       Impact factor: 3.411

7.  High-throughput identification of promoters and screening of highly active promoter-5'-UTR DNA region with different characteristics from Bacillus thuringiensis.

Authors:  Jieping Wang; Xulu Ai; Han Mei; Yang Fu; Bo Chen; Ziniu Yu; Jin He
Journal:  PLoS One       Date:  2013-05-10       Impact factor: 3.240

8.  Benzoic Acid-Inducible Gene Expression in Mycobacteria.

Authors:  Marte S Dragset; Amy K Barczak; Nisha Kannan; Mali Mærk; Trude H Flo; Svein Valla; Eric J Rubin; Magnus Steigedal
Journal:  PLoS One       Date:  2015-09-08       Impact factor: 3.240

9.  A Novel and Fast Purification Method for Nucleoside Transporters.

Authors:  Zhenyu Hao; Maren Thomsen; Vincent L G Postis; Amelia Lesiuk; David Sharples; Yingying Wang; Mark Bartlam; Adrian Goldman
Journal:  Front Mol Biosci       Date:  2016-06-09

10.  RIP-Seq Suggests Translational Regulation by L7Ae in Archaea.

Authors:  Michael Daume; Michael Uhl; Rolf Backofen; Lennart Randau
Journal:  mBio       Date:  2017-08-01       Impact factor: 7.867

  10 in total

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